RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-211ENST00000525970 DPYSL4O14531 572 aa10.79□□□□□ -0.68
CSDE1-211ENST00000525970 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
CSDE1-211ENST00000525970 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
CSDE1-211ENST00000525970 PTPN5P54829 565 aa10.77□□□□□ -0.69
CSDE1-211ENST00000525970 WNT2BQ93097 391 aa10.77□□□□□ -0.69
CSDE1-211ENST00000525970 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-211ENST00000525970 COL9A1P20849 921 aa10.74□□□□□ -0.69
CSDE1-211ENST00000525970 C6orf132Q5T0Z8 1188 aa10.73□□□□□ -0.69
CSDE1-211ENST00000525970 LAPTM4BQ86VI4 370 aa10.73□□□□□ -0.69
CSDE1-211ENST00000525970 PROX2Q3B8N5 592 aa10.72□□□□□ -0.69
CSDE1-211ENST00000525970 IFFO2Q5TF58 517 aa10.72□□□□□ -0.69
CSDE1-211ENST00000525970 SPDYE16A6NNV3 312 aaPredicted RBP10.71□□□□□ -0.69
CSDE1-211ENST00000525970 PDIA6Q15084 440 aa10.71□□□□□ -0.69
CSDE1-211ENST00000525970 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
CSDE1-211ENST00000525970 DDX12PQ92771 950 aa10.68□□□□□ -0.7
CSDE1-211ENST00000525970 E2F4Q16254 413 aa10.67□□□□□ -0.7
CSDE1-211ENST00000525970 KIAA1468Q9P260 1216 aa10.67□□□□□ -0.7
CSDE1-211ENST00000525970 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
CSDE1-211ENST00000525970 CFAP44Q96MT7 982 aa10.66□□□□□ -0.7
CSDE1-211ENST00000525970 TRIM6-TRIM34B2RNG4 842 aa10.65□□□□□ -0.7
CSDE1-211ENST00000525970 EN1Q05925 392 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-211ENST00000525970 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-211ENST00000525970 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
CSDE1-211ENST00000525970 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
CSDE1-211ENST00000525970 NBR1Q14596 966 aa10.64□□□□□ -0.71
CSDE1-211ENST00000525970 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
CSDE1-211ENST00000525970 RGS20O76081 388 aa10.63□□□□□ -0.71
CSDE1-211ENST00000525970 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
CSDE1-211ENST00000525970 ZFRQ96KR1 1074 aaKnown RBP10.63□□□□□ -0.71
CSDE1-211ENST00000525970 MAP3K7O43318 606 aa10.62□□□□□ -0.71
CSDE1-211ENST00000525970 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
CSDE1-211ENST00000525970 BCAMP50895 628 aa10.59□□□□□ -0.71
CSDE1-211ENST00000525970 PACS2Q86VP3 889 aa10.59□□□□□ -0.71
CSDE1-211ENST00000525970 SEPT9Q9UHD8 586 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-211ENST00000525970 A0A0G2JS52 829 aa10.58□□□□□ -0.72
CSDE1-211ENST00000525970 TSR1Q2NL82 804 aaKnown RBP10.58□□□□□ -0.72
CSDE1-211ENST00000525970 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
CSDE1-211ENST00000525970 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-211ENST00000525970 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
CSDE1-211ENST00000525970 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
CSDE1-211ENST00000525970 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
CSDE1-211ENST00000525970 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
CSDE1-211ENST00000525970 GRXCR2A6NFK2 248 aa10.53□□□□□ -0.72
CSDE1-211ENST00000525970 PRSS12P56730 875 aa10.53□□□□□ -0.72
CSDE1-211ENST00000525970 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
CSDE1-211ENST00000525970 TSR3Q9UJK0 312 aaKnown RBP10.53□□□□□ -0.72
CSDE1-211ENST00000525970 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
CSDE1-211ENST00000525970 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
CSDE1-211ENST00000525970 HPS5Q9UPZ3 1129 aa10.5□□□□□ -0.73
CSDE1-211ENST00000525970 OSBPP22059 807 aa10.49□□□□□ -0.73
CSDE1-211ENST00000525970 RBM27Q9P2N5 1060 aaKnown RBP10.49□□□□□ -0.73
CSDE1-211ENST00000525970 NBPF26B4DH59 902 aa10.48□□□□□ -0.73
CSDE1-211ENST00000525970 KCNC4Q03721 635 aa10.47□□□□□ -0.73
CSDE1-211ENST00000525970 FAM198AQ9UFP1 575 aa10.46□□□□□ -0.73
CSDE1-211ENST00000525970 HAP1P54257 671 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-211ENST00000525970 TATDN2Q93075 761 aa10.45□□□□□ -0.74
CSDE1-211ENST00000525970 PPP4CP60510 307 aa10.44□□□□□ -0.74
CSDE1-211ENST00000525970 CDHR5Q9HBB8 845 aa10.43□□□□□ -0.74
CSDE1-211ENST00000525970 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
CSDE1-211ENST00000525970 SMAPO00193 183 aa10.42□□□□□ -0.74
CSDE1-211ENST00000525970 SAMD7Q7Z3H4 446 aa10.42□□□□□ -0.74
CSDE1-211ENST00000525970 ARHGEF1Q92888 912 aaKnown RBP10.42□□□□□ -0.74
CSDE1-211ENST00000525970 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
CSDE1-211ENST00000525970 IRX2Q9BZI1 471 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-211ENST00000525970 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
CSDE1-211ENST00000525970 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
CSDE1-211ENST00000525970 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
CSDE1-211ENST00000525970 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
CSDE1-211ENST00000525970 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
CSDE1-211ENST00000525970 NPDC1Q9NQX5 325 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-211ENST00000525970 PADI6Q6TGC4 694 aa10.35□□□□□ -0.75
CSDE1-211ENST00000525970 TJAP1Q5JTD0 557 aa10.34□□□□□ -0.75
CSDE1-211ENST00000525970 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
CSDE1-211ENST00000525970 IL21Q9HBE4 155 aa10.32□□□□□ -0.76
CSDE1-211ENST00000525970 SLF2Q8IX21 1173 aa10.31□□□□□ -0.76
CSDE1-211ENST00000525970 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-211ENST00000525970 SLC4A3P48751 1232 aa10.3□□□□□ -0.76
CSDE1-211ENST00000525970 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
CSDE1-211ENST00000525970 MTRQ99707 1265 aa10.3□□□□□ -0.76
CSDE1-211ENST00000525970 RNF40O75150 1001 aa10.29□□□□□ -0.76
CSDE1-211ENST00000525970 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
CSDE1-211ENST00000525970 EYA1Q99502 592 aa10.29□□□□□ -0.76
CSDE1-211ENST00000525970 APLP1P51693 650 aa10.27□□□□□ -0.77
CSDE1-211ENST00000525970 PTGDRQ13258 359 aa10.27□□□□□ -0.77
CSDE1-211ENST00000525970 PRR14Q9BWN1 585 aa10.25□□□□□ -0.77
CSDE1-211ENST00000525970 VSIG10Q8N0Z9 540 aa10.24□□□□□ -0.77
CSDE1-211ENST00000525970 LAPTM4AQ15012 233 aa10.23□□□□□ -0.77
CSDE1-211ENST00000525970 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
CSDE1-211ENST00000525970 DNAJB2P25686 324 aa10.22□□□□□ -0.77
CSDE1-211ENST00000525970 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
CSDE1-211ENST00000525970 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
CSDE1-211ENST00000525970 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.77
CSDE1-211ENST00000525970 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
CSDE1-211ENST00000525970 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
CSDE1-211ENST00000525970 ADGRG1Q9Y653 693 aa10.2□□□□□ -0.78
CSDE1-211ENST00000525970 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
CSDE1-211ENST00000525970 FCHSD2O94868 740 aa10.19□□□□□ -0.78
CSDE1-211ENST00000525970 GGCXP38435 758 aa10.18□□□□□ -0.78
CSDE1-211ENST00000525970 BCANQ96GW7 911 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms