RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 NBPF3Q9H094 633 aa8.68□□□□□ -1.02
LINCR-0001-203ENST00000524047 COL9A1P20849 921 aa8.67□□□□□ -1.02
LINCR-0001-203ENST00000524047 PDIA6Q15084 440 aa8.66□□□□□ -1.02
LINCR-0001-203ENST00000524047 CFAP44Q96MT7 982 aa8.66□□□□□ -1.02
LINCR-0001-203ENST00000524047 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
LINCR-0001-203ENST00000524047 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
LINCR-0001-203ENST00000524047 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
LINCR-0001-203ENST00000524047 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
LINCR-0001-203ENST00000524047 THSD4Q6ZMP0 1018 aa8.65□□□□□ -1.02
LINCR-0001-203ENST00000524047 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
LINCR-0001-203ENST00000524047 ONECUT3O60422 494 aaPredicted RBP8.64□□□□□ -1.03
LINCR-0001-203ENST00000524047 E2F4Q16254 413 aa8.64□□□□□ -1.03
LINCR-0001-203ENST00000524047 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
LINCR-0001-203ENST00000524047 WNT2BQ93097 391 aa8.64□□□□□ -1.03
LINCR-0001-203ENST00000524047 PTPN5P54829 565 aa8.63□□□□□ -1.03
LINCR-0001-203ENST00000524047 DDX12PQ92771 950 aa8.63□□□□□ -1.03
LINCR-0001-203ENST00000524047 WDR70Q9NW82 654 aa8.62□□□□□ -1.03
LINCR-0001-203ENST00000524047 LAPTM4BQ86VI4 370 aa8.61□□□□□ -1.03
LINCR-0001-203ENST00000524047 EN1Q05925 392 aaPredicted RBP8.6□□□□□ -1.03
LINCR-0001-203ENST00000524047 RBM33Q96EV2 1170 aaKnown RBP8.6□□□□□ -1.03
LINCR-0001-203ENST00000524047 NBR1Q14596 966 aa8.59□□□□□ -1.03
LINCR-0001-203ENST00000524047 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
LINCR-0001-203ENST00000524047 TRIM6-TRIM34B2RNG4 842 aa8.58□□□□□ -1.04
LINCR-0001-203ENST00000524047 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
LINCR-0001-203ENST00000524047 ANKK1Q8NFD2 765 aa8.57□□□□□ -1.04
LINCR-0001-203ENST00000524047 MAP3K7O43318 606 aa8.56□□□□□ -1.04
LINCR-0001-203ENST00000524047 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
LINCR-0001-203ENST00000524047 ZFRQ96KR1 1074 aaKnown RBP8.55□□□□□ -1.04
LINCR-0001-203ENST00000524047 SOWAHBA6NEL2 793 aa8.54□□□□□ -1.04
LINCR-0001-203ENST00000524047 FAM98CQ17RN3 349 aaKnown RBP8.53□□□□□ -1.04
LINCR-0001-203ENST00000524047 CERKQ8TCT0 537 aa8.52□□□□□ -1.05
LINCR-0001-203ENST00000524047 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
LINCR-0001-203ENST00000524047 GRXCR2A6NFK2 248 aa8.51□□□□□ -1.05
LINCR-0001-203ENST00000524047 BCAMP50895 628 aa8.51□□□□□ -1.05
LINCR-0001-203ENST00000524047 NYAP1Q6ZVC0 841 aa8.51□□□□□ -1.05
LINCR-0001-203ENST00000524047 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
LINCR-0001-203ENST00000524047 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
LINCR-0001-203ENST00000524047 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
LINCR-0001-203ENST00000524047 OSBPP22059 807 aa8.49□□□□□ -1.05
LINCR-0001-203ENST00000524047 CDCA7LQ96GN5 454 aa8.49□□□□□ -1.05
LINCR-0001-203ENST00000524047 PRSS12P56730 875 aa8.48□□□□□ -1.05
LINCR-0001-203ENST00000524047 TSHZ2Q9NRE2 1034 aa8.48□□□□□ -1.05
LINCR-0001-203ENST00000524047 RGS20O76081 388 aa8.47□□□□□ -1.05
LINCR-0001-203ENST00000524047 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
LINCR-0001-203ENST00000524047 A0A0G2JS52 829 aa8.46□□□□□ -1.06
LINCR-0001-203ENST00000524047 ARHGEF1Q92888 912 aaKnown RBP8.46□□□□□ -1.06
LINCR-0001-203ENST00000524047 LRCH3Q96II8 777 aa8.46□□□□□ -1.06
LINCR-0001-203ENST00000524047 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
LINCR-0001-203ENST00000524047 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
LINCR-0001-203ENST00000524047 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
LINCR-0001-203ENST00000524047 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
LINCR-0001-203ENST00000524047 TSR3Q9UJK0 312 aaKnown RBP8.45□□□□□ -1.06
LINCR-0001-203ENST00000524047 CDHR5Q9HBB8 845 aa8.44□□□□□ -1.06
LINCR-0001-203ENST00000524047 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
LINCR-0001-203ENST00000524047 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
LINCR-0001-203ENST00000524047 TATDN2Q93075 761 aa8.42□□□□□ -1.06
LINCR-0001-203ENST00000524047 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
LINCR-0001-203ENST00000524047 SMAPO00193 183 aa8.41□□□□□ -1.06
LINCR-0001-203ENST00000524047 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
LINCR-0001-203ENST00000524047 NPDC1Q9NQX5 325 aaPredicted RBP8.41□□□□□ -1.06
LINCR-0001-203ENST00000524047 PLCB2Q00722 1185 aa8.4□□□□□ -1.06
LINCR-0001-203ENST00000524047 TTC13Q8NBP0 860 aa8.4□□□□□ -1.06
LINCR-0001-203ENST00000524047 PNMA3Q9UL41 463 aa8.4□□□□□ -1.06
LINCR-0001-203ENST00000524047 PPP4CP60510 307 aa8.39□□□□□ -1.07
LINCR-0001-203ENST00000524047 KCNC4Q03721 635 aa8.39□□□□□ -1.07
LINCR-0001-203ENST00000524047 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
LINCR-0001-203ENST00000524047 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
LINCR-0001-203ENST00000524047 MLLT3P42568 568 aaPredicted RBP8.37□□□□□ -1.07
LINCR-0001-203ENST00000524047 PADI6Q6TGC4 694 aa8.36□□□□□ -1.07
LINCR-0001-203ENST00000524047 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
LINCR-0001-203ENST00000524047 HDGFP51858 240 aaKnown RBP8.35□□□□□ -1.07
LINCR-0001-203ENST00000524047 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
LINCR-0001-203ENST00000524047 PTGDRQ13258 359 aa8.32□□□□□ -1.08
LINCR-0001-203ENST00000524047 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
LINCR-0001-203ENST00000524047 EYA1Q99502 592 aa8.32□□□□□ -1.08
LINCR-0001-203ENST00000524047 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
LINCR-0001-203ENST00000524047 SWT1Q5T5J6 900 aaKnown RBP8.29□□□□□ -1.08
LINCR-0001-203ENST00000524047 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
LINCR-0001-203ENST00000524047 RNF40O75150 1001 aa8.28□□□□□ -1.08
LINCR-0001-203ENST00000524047 MTRQ99707 1265 aa8.28□□□□□ -1.08
LINCR-0001-203ENST00000524047 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
LINCR-0001-203ENST00000524047 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
LINCR-0001-203ENST00000524047 APLP1P51693 650 aa8.27□□□□□ -1.09
LINCR-0001-203ENST00000524047 SEMA3EO15041 775 aa8.26□□□□□ -1.09
LINCR-0001-203ENST00000524047 SLC4A3P48751 1232 aa8.26□□□□□ -1.09
LINCR-0001-203ENST00000524047 NUTM2FA1L443 756 aa8.25□□□□□ -1.09
LINCR-0001-203ENST00000524047 DNAJB2P25686 324 aa8.24□□□□□ -1.09
LINCR-0001-203ENST00000524047 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
LINCR-0001-203ENST00000524047 ADGRG1Q9Y653 693 aa8.24□□□□□ -1.09
LINCR-0001-203ENST00000524047 FCHSD2O94868 740 aa8.23□□□□□ -1.09
LINCR-0001-203ENST00000524047 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
LINCR-0001-203ENST00000524047 PRR14Q9BWN1 585 aa8.22□□□□□ -1.09
LINCR-0001-203ENST00000524047 TMEM134Q9H6X4 195 aa8.22□□□□□ -1.09
LINCR-0001-203ENST00000524047 TESPA1A2RU30 521 aaPredicted RBP8.21□□□□□ -1.1
LINCR-0001-203ENST00000524047 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
LINCR-0001-203ENST00000524047 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
LINCR-0001-203ENST00000524047 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
LINCR-0001-203ENST00000524047 HIC1Q14526 733 aa8.18□□□□□ -1.1
LINCR-0001-203ENST00000524047 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.18□□□□□ -1.1
LINCR-0001-203ENST00000524047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms