RNA–Protein interactions for RNA: ENST00000523960.1

STK3-217, Transcript of serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene STK3, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK3-217ENST00000523960 CFAP43Q8NDM7 1665 aa15.1■□□□□ 0.01
STK3-217ENST00000523960 NAIPQ13075 1403 aa15.1■□□□□ 0.01
STK3-217ENST00000523960 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
STK3-217ENST00000523960 EID1Q9Y6B2 187 aa15.09■□□□□ 0.01
STK3-217ENST00000523960 CCDC141Q6ZP82 1450 aa15.09■□□□□ 0.01
STK3-217ENST00000523960 ZNF644Q9H582 1327 aaPredicted RBP15.09■□□□□ 0.01
STK3-217ENST00000523960 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
STK3-217ENST00000523960 BCL11AQ9H165 835 aa15.08■□□□□ 0
STK3-217ENST00000523960 CDK13Q14004 1512 aaKnown RBP15.08■□□□□ 0
STK3-217ENST00000523960 CAMSAP2Q08AD1 1489 aa15.08■□□□□ 0
STK3-217ENST00000523960 TCERG1O14776 1098 aaKnown RBP15.08■□□□□ 0
STK3-217ENST00000523960 GOLGA2Q08379 1002 aa15.08■□□□□ 0
STK3-217ENST00000523960 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
STK3-217ENST00000523960 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
STK3-217ENST00000523960 ITSN2Q9NZM3 1697 aa15.07■□□□□ 0
STK3-217ENST00000523960 GOLGA6L22H0YM25 854 aa15.07■□□□□ 0
STK3-217ENST00000523960 NEUROD2Q15784 382 aa15.06■□□□□ 0
STK3-217ENST00000523960 ADAMTS12P58397 1594 aa15.05■□□□□ -0
STK3-217ENST00000523960 TNNT2P45379 298 aaPredicted RBP15.05■□□□□ -0
STK3-217ENST00000523960 UGGT2Q9NYU1 1516 aa15.05■□□□□ -0
STK3-217ENST00000523960 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
STK3-217ENST00000523960 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
STK3-217ENST00000523960 PMFBP1Q8TBY8 1022 aa15.04■□□□□ -0
STK3-217ENST00000523960 FRAT1Q92837 279 aaPredicted RBP15.04■□□□□ -0
STK3-217ENST00000523960 PANK3Q9H999 370 aa15.04■□□□□ -0
STK3-217ENST00000523960 MLECQ14165 292 aa15.04■□□□□ -0
STK3-217ENST00000523960 STK26Q9P289 416 aa15.03■□□□□ -0
STK3-217ENST00000523960 KIF7Q2M1P5 1343 aa15.03■□□□□ -0
STK3-217ENST00000523960 LAS1LQ9Y4W2 734 aaKnown RBP15.02□□□□□ -0.01
STK3-217ENST00000523960 RTF1Q92541 710 aaKnown RBP15.02□□□□□ -0.01
STK3-217ENST00000523960 RWDD1Q9H446 243 aaPredicted RBP15.02□□□□□ -0.01
STK3-217ENST00000523960 NOP58Q9Y2X3 529 aaKnown RBP15.02□□□□□ -0.01
STK3-217ENST00000523960 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
STK3-217ENST00000523960 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
STK3-217ENST00000523960 B4GALNT3Q6L9W6 998 aa15.01□□□□□ -0.01
STK3-217ENST00000523960 ABCC5O15440 1437 aa15□□□□□ -0.01
STK3-217ENST00000523960 ZBTB7CA1YPR0 619 aa15□□□□□ -0.01
STK3-217ENST00000523960 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
STK3-217ENST00000523960 RPGRIP1LQ68CZ1 1315 aa14.99□□□□□ -0.01
STK3-217ENST00000523960 E9PSI1 815 aa14.98□□□□□ -0.01
STK3-217ENST00000523960 TCOF1Q13428 1488 aaKnown RBP14.98□□□□□ -0.01
STK3-217ENST00000523960 AAMPQ13685 434 aa14.98□□□□□ -0.01
STK3-217ENST00000523960 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
STK3-217ENST00000523960 HDAC5Q9UQL6 1122 aa14.97□□□□□ -0.01
STK3-217ENST00000523960 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
STK3-217ENST00000523960 SAFB2Q14151 953 aaKnown RBP eCLIP14.96□□□□□ -0.02
STK3-217ENST00000523960 KIAA0556O60303 1618 aa14.95□□□□□ -0.02
STK3-217ENST00000523960 WDR62O43379 1518 aa14.95□□□□□ -0.02
STK3-217ENST00000523960 TRAK1Q9UPV9 953 aa14.95□□□□□ -0.02
STK3-217ENST00000523960 PTMSP20962 102 aa14.94□□□□□ -0.02
STK3-217ENST00000523960 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
STK3-217ENST00000523960 NBR1Q14596 966 aa14.94□□□□□ -0.02
STK3-217ENST00000523960 ANKRD30BQ9BXX2 1392 aa14.94□□□□□ -0.02
STK3-217ENST00000523960 PLB1Q6P1J6 1458 aa14.93□□□□□ -0.02
STK3-217ENST00000523960 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
STK3-217ENST00000523960 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
STK3-217ENST00000523960 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
STK3-217ENST00000523960 RGS3P49796 1198 aa14.92□□□□□ -0.02
STK3-217ENST00000523960 ZNF608Q9ULD9 1512 aaPredicted RBP14.92□□□□□ -0.02
STK3-217ENST00000523960 MCCP23508 829 aa14.91□□□□□ -0.02
STK3-217ENST00000523960 RBM19Q9Y4C8 960 aaKnown RBP14.91□□□□□ -0.02
STK3-217ENST00000523960 NCOA1Q15788 1441 aa14.9□□□□□ -0.02
STK3-217ENST00000523960 CENPQQ7L2Z9 268 aaPredicted RBP14.9□□□□□ -0.02
STK3-217ENST00000523960 RRP1P56182 461 aaKnown RBP14.89□□□□□ -0.03
STK3-217ENST00000523960 HSCBQ8IWL3 235 aa14.89□□□□□ -0.03
STK3-217ENST00000523960 RPRD2Q5VT52 1461 aaKnown RBP14.89□□□□□ -0.03
STK3-217ENST00000523960 SLC52A1Q9NWF4 448 aa14.88□□□□□ -0.03
STK3-217ENST00000523960 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
STK3-217ENST00000523960 COG3Q96JB2 828 aa14.88□□□□□ -0.03
STK3-217ENST00000523960 FAM69CQ0P6D2 419 aa14.87□□□□□ -0.03
STK3-217ENST00000523960 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
STK3-217ENST00000523960 HMMRO75330 724 aa14.86□□□□□ -0.03
STK3-217ENST00000523960 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
STK3-217ENST00000523960 GPATCH8Q9UKJ3 1502 aaKnown RBP14.86□□□□□ -0.03
STK3-217ENST00000523960 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
STK3-217ENST00000523960 SAMD9Q5K651 1589 aa14.86□□□□□ -0.03
STK3-217ENST00000523960 RUNDC1Q96C34 613 aa14.85□□□□□ -0.03
STK3-217ENST00000523960 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
STK3-217ENST00000523960 HSP90AB1P08238 724 aaKnown RBP14.85□□□□□ -0.03
STK3-217ENST00000523960 LMOD2Q6P5Q4 547 aa14.85□□□□□ -0.03
STK3-217ENST00000523960 ITPRIPQ8IWB1 547 aa14.85□□□□□ -0.03
STK3-217ENST00000523960 AFAP1Q8N556 730 aa14.85□□□□□ -0.03
STK3-217ENST00000523960 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
STK3-217ENST00000523960 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
STK3-217ENST00000523960 NUP153P49790 1475 aaKnown RBP14.84□□□□□ -0.03
STK3-217ENST00000523960 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
STK3-217ENST00000523960 EIF4G3O43432 1585 aaKnown RBP14.83□□□□□ -0.03
STK3-217ENST00000523960 FAM135AQ9P2D6 1515 aa14.83□□□□□ -0.04
STK3-217ENST00000523960 ADGRL1O94910 1474 aa14.82□□□□□ -0.04
STK3-217ENST00000523960 NINLQ9Y2I6 1382 aa14.82□□□□□ -0.04
STK3-217ENST00000523960 SENP3-EIF4A1A0A087X0R7 540 aa14.82□□□□□ -0.04
STK3-217ENST00000523960 DIAPH1O60610 1272 aaKnown RBP14.82□□□□□ -0.04
STK3-217ENST00000523960 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
STK3-217ENST00000523960 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
STK3-217ENST00000523960 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
STK3-217ENST00000523960 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
STK3-217ENST00000523960 ZKSCAN2Q63HK3 967 aa14.8□□□□□ -0.04
STK3-217ENST00000523960 AMPHP49418 695 aa14.79□□□□□ -0.04
STK3-217ENST00000523960 NUP160Q12769 1436 aa14.79□□□□□ -0.04
STK3-217ENST00000523960 POGZQ7Z3K3 1410 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms