RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 FOSBP53539 338 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 DOK7Q18PE1 504 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 GPR153Q6NV75 609 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 NLRP7Q8WX94 980 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 JPH4Q96JJ6 628 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 SCUBE2Q9NQ36 999 aa5.42□□□□□ -1.54
CKS1BP7-201ENST00000522230 PARP9Q8IXQ6 854 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 ADAM33Q9BZ11 813 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 FAM117AQ9C073 453 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 LHX6Q9UPM6 363 aa5.41□□□□□ -1.54
CKS1BP7-201ENST00000522230 C6orf132Q5T0Z8 1188 aa5.4□□□□□ -1.54
CKS1BP7-201ENST00000522230 ZNF710Q8N1W2 664 aa5.4□□□□□ -1.54
CKS1BP7-201ENST00000522230 REPIN1Q9BWE0 567 aaKnown RBP5.4□□□□□ -1.54
CKS1BP7-201ENST00000522230 PADI6Q6TGC4 694 aa5.39□□□□□ -1.55
CKS1BP7-201ENST00000522230 ZDHHC16Q969W1 377 aa5.39□□□□□ -1.55
CKS1BP7-201ENST00000522230 PHOX2BQ99453 314 aa5.39□□□□□ -1.55
CKS1BP7-201ENST00000522230 TTLL12Q14166 644 aaPredicted RBP5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 AMHR2Q16671 573 aa5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 FBXW7Q969H0 707 aa5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 OTUD5Q96G74 571 aa5.38□□□□□ -1.55
CKS1BP7-201ENST00000522230 PLEKHG3A1L390 1219 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 RIMBP2O15034 1052 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 COL9A1P20849 921 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 MAMSTRQ6ZN01 415 aa5.37□□□□□ -1.55
CKS1BP7-201ENST00000522230 C3orf80F5H4A9 247 aa5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 MS4A1P11836 297 aa5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 MDM2Q00987 491 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 GIGYF2Q6Y7W6 1299 aaKnown RBP5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 FAM198AQ9UFP1 575 aa5.36□□□□□ -1.55
CKS1BP7-201ENST00000522230 ZSWIM6Q9HCJ5 1215 aa5.35□□□□□ -1.55
CKS1BP7-201ENST00000522230 CDCA7LQ96GN5 454 aa5.34□□□□□ -1.55
CKS1BP7-201ENST00000522230 ADGRG1Q9Y653 693 aa5.34□□□□□ -1.55
CKS1BP7-201ENST00000522230 HOXB1P14653 301 aaPredicted RBP5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 PRSS12P56730 875 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 PPP4R3BQ5MIZ7 849 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 C14orf37Q86TY3 774 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 METTL3Q86U44 580 aaKnown RBP5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 TTC13Q8NBP0 860 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 TMUB1Q9BVT8 246 aa5.33□□□□□ -1.56
CKS1BP7-201ENST00000522230 PXYLP1Q8TE99 480 aa5.32□□□□□ -1.56
CKS1BP7-201ENST00000522230 BCL2L12Q9HB09 334 aa5.32□□□□□ -1.56
CKS1BP7-201ENST00000522230 TSKSQ9UJT2 592 aa5.32□□□□□ -1.56
CKS1BP7-201ENST00000522230 SMAPO00193 183 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 PROX2Q3B8N5 592 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 LHX8Q68G74 356 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 KCNK17Q96T54 332 aa5.31□□□□□ -1.56
CKS1BP7-201ENST00000522230 SNPHO15079 494 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 PTPREP23469 700 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 SSTR3P32745 418 aaPredicted RBP5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 CLCN1P35523 988 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 PSEN2P49810 448 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 CERKQ8TCT0 537 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 DDRGK1Q96HY6 314 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 GPCPD1Q9NPB8 672 aa5.3□□□□□ -1.56
CKS1BP7-201ENST00000522230 PPP1R3GB7ZBB8 358 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 OATP04181 439 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 POTEEQ6S8J3 1075 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 NUDT18Q6ZVK8 323 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 MARVELD3Q96A59 401 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 FAM217BQ9NTX9 383 aaPredicted RBP5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 AXIN2Q9Y2T1 843 aa5.29□□□□□ -1.56
CKS1BP7-201ENST00000522230 RCCD1A6NED2 376 aa5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 VARS2Q5ST30 1063 aaKnown RBP5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 BEGAINQ9BUH8 593 aa5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 RBM27Q9P2N5 1060 aaKnown RBP5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 PNMA3Q9UL41 463 aa5.28□□□□□ -1.56
CKS1BP7-201ENST00000522230 ERBB3P21860 1342 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 PSDA5PKW4 1024 aaPredicted RBP5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 TRIM6-TRIM34B2RNG4 842 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 ST18O60284 1047 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 DMRTA1Q5VZB9 504 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 RBM46Q8TBY0 533 aaKnown RBP5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 EYA1Q99502 592 aa5.27□□□□□ -1.57
CKS1BP7-201ENST00000522230 TATDN2Q93075 761 aa5.26□□□□□ -1.57
CKS1BP7-201ENST00000522230 SUPT5HO00267 1087 aaKnown RBP5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 PROCA1Q8NCQ7 364 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 POLR3EQ9NVU0 708 aa5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 KIAA1468Q9P260 1216 aa5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 SEPT9Q9UHD8 586 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP7-201ENST00000522230 POTEB3A0JP26 581 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 FAM205CA6NFA0 338 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 DDX11L8A8MPP1 907 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 NBPF26B4DH59 902 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 EMP3P54852 163 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 FBXO31Q5XUX0 539 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 POTEBQ6S5H4 581 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 FAM163AQ96GL9 167 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 ZBED2Q9BTP6 218 aa5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 ATP1B4Q9UN42 357 aaPredicted RBP5.24□□□□□ -1.57
CKS1BP7-201ENST00000522230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 SH3D19Q5HYK7 790 aa5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 MYSM1Q5VVJ2 828 aa5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 PACS2Q86VP3 889 aa5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 PCMTD1Q96MG8 357 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 DAXXQ9UER7 740 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP7-201ENST00000522230 DNAJB2P25686 324 aa5.22□□□□□ -1.57
CKS1BP7-201ENST00000522230 TBC1D2Q9BYX2 928 aa5.22□□□□□ -1.57
CKS1BP7-201ENST00000522230 TMEM134Q9H6X4 195 aa5.22□□□□□ -1.57
CKS1BP7-201ENST00000522230 ARHGAP33O14559 1287 aa5.21□□□□□ -1.58
CKS1BP7-201ENST00000522230 CD46P15529 392 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms