RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-227ENST00000521387 KIDINS220Q9ULH0 1771 aa12.65□□□□□ -0.38
CTNNA1-227ENST00000521387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
CTNNA1-227ENST00000521387 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
CTNNA1-227ENST00000521387 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-227ENST00000521387 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
CTNNA1-227ENST00000521387 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-227ENST00000521387 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
CTNNA1-227ENST00000521387 ABCC1P33527 1531 aa12.59□□□□□ -0.39
CTNNA1-227ENST00000521387 SYNMO15061 1565 aa12.59□□□□□ -0.39
CTNNA1-227ENST00000521387 KIF14Q15058 1648 aa12.59□□□□□ -0.39
CTNNA1-227ENST00000521387 LRP6O75581 1613 aa12.58□□□□□ -0.4
CTNNA1-227ENST00000521387 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-227ENST00000521387 RXRBP28702 533 aa12.57□□□□□ -0.4
CTNNA1-227ENST00000521387 ZNF772Q68DY9 489 aaPredicted RBP12.57□□□□□ -0.4
CTNNA1-227ENST00000521387 GGT6Q6P531 493 aa12.57□□□□□ -0.4
CTNNA1-227ENST00000521387 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
CTNNA1-227ENST00000521387 TNRQ92752 1358 aa12.56□□□□□ -0.4
CTNNA1-227ENST00000521387 THEMISQ8N1K5 641 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-227ENST00000521387 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
CTNNA1-227ENST00000521387 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-227ENST00000521387 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-227ENST00000521387 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
CTNNA1-227ENST00000521387 JCADQ9P266 1359 aa12.54□□□□□ -0.4
CTNNA1-227ENST00000521387 ROBO1Q9Y6N7 1651 aa12.53□□□□□ -0.4
CTNNA1-227ENST00000521387 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
CTNNA1-227ENST00000521387 PLXNC1O60486 1568 aa12.52□□□□□ -0.4
CTNNA1-227ENST00000521387 ITSN2Q9NZM3 1697 aa12.52□□□□□ -0.4
CTNNA1-227ENST00000521387 APLP2Q06481 763 aa12.51□□□□□ -0.41
CTNNA1-227ENST00000521387 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
CTNNA1-227ENST00000521387 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-227ENST00000521387 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
CTNNA1-227ENST00000521387 ZC3H13Q5T200 1668 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-227ENST00000521387 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
CTNNA1-227ENST00000521387 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
CTNNA1-227ENST00000521387 A2MP01023 1474 aa12.48□□□□□ -0.41
CTNNA1-227ENST00000521387 RGS12O14924 1447 aa12.48□□□□□ -0.41
CTNNA1-227ENST00000521387 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-227ENST00000521387 MIA2Q96PC5 1412 aa12.47□□□□□ -0.41
CTNNA1-227ENST00000521387 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-227ENST00000521387 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
CTNNA1-227ENST00000521387 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
CTNNA1-227ENST00000521387 KCNA4P22459 653 aa12.46□□□□□ -0.41
CTNNA1-227ENST00000521387 PZPP20742 1482 aa12.46□□□□□ -0.42
CTNNA1-227ENST00000521387 SPATA31A6Q5VVP1 1343 aa12.45□□□□□ -0.42
CTNNA1-227ENST00000521387 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-227ENST00000521387 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
CTNNA1-227ENST00000521387 NLRP1Q9C000 1473 aa12.45□□□□□ -0.42
CTNNA1-227ENST00000521387 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
CTNNA1-227ENST00000521387 PHLPP1O60346 1717 aa12.44□□□□□ -0.42
CTNNA1-227ENST00000521387 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-227ENST00000521387 LTKP29376 864 aa12.43□□□□□ -0.42
CTNNA1-227ENST00000521387 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
CTNNA1-227ENST00000521387 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-227ENST00000521387 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 PREX2Q70Z35 1606 aa12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-227ENST00000521387 AFF2P51816 1311 aa12.4□□□□□ -0.42
CTNNA1-227ENST00000521387 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
CTNNA1-227ENST00000521387 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
CTNNA1-227ENST00000521387 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-227ENST00000521387 EP400Q96L91 3159 aa12.39□□□□□ -0.43
CTNNA1-227ENST00000521387 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
CTNNA1-227ENST00000521387 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
CTNNA1-227ENST00000521387 SYCP2Q9BX26 1530 aa12.38□□□□□ -0.43
CTNNA1-227ENST00000521387 RBM6P78332 1123 aaKnown RBP12.38□□□□□ -0.43
CTNNA1-227ENST00000521387 QTRT2Q9H974 415 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-227ENST00000521387 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-227ENST00000521387 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-227ENST00000521387 CLIP1P30622 1438 aa12.37□□□□□ -0.43
CTNNA1-227ENST00000521387 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
CTNNA1-227ENST00000521387 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-227ENST00000521387 KCNA6P17658 529 aa12.35□□□□□ -0.43
CTNNA1-227ENST00000521387 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
CTNNA1-227ENST00000521387 LRP5O75197 1615 aa12.35□□□□□ -0.43
CTNNA1-227ENST00000521387 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
CTNNA1-227ENST00000521387 TXNDC2Q86VQ3 553 aa12.34□□□□□ -0.43
CTNNA1-227ENST00000521387 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
CTNNA1-227ENST00000521387 POLA2Q14181 598 aa12.33□□□□□ -0.44
CTNNA1-227ENST00000521387 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
CTNNA1-227ENST00000521387 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
CTNNA1-227ENST00000521387 CDC42BPAQ5VT25 1732 aa12.32□□□□□ -0.44
CTNNA1-227ENST00000521387 WASHC2CQ9Y4E1 1318 aa12.32□□□□□ -0.44
CTNNA1-227ENST00000521387 DHX29Q7Z478 1369 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-227ENST00000521387 KIAA1107Q9UPP5 1409 aa12.31□□□□□ -0.44
CTNNA1-227ENST00000521387 KIF3BO15066 747 aa12.31□□□□□ -0.44
CTNNA1-227ENST00000521387 PRDM15P57071 1507 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-227ENST00000521387 YY1P25490 414 aa12.3□□□□□ -0.44
CTNNA1-227ENST00000521387 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-227ENST00000521387 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
CTNNA1-227ENST00000521387 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
CTNNA1-227ENST00000521387 SLIT1O75093 1534 aa12.29□□□□□ -0.44
CTNNA1-227ENST00000521387 TIAM1Q13009 1591 aa12.29□□□□□ -0.44
CTNNA1-227ENST00000521387 MSH6P52701 1360 aa12.29□□□□□ -0.44
CTNNA1-227ENST00000521387 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
CTNNA1-227ENST00000521387 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms