RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
TVP23C-206ENST00000521179 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
TVP23C-206ENST00000521179 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
TVP23C-206ENST00000521179 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
TVP23C-206ENST00000521179 POTEMA6NI47 508 aa12.58□□□□□ -0.4
TVP23C-206ENST00000521179 PTPREP23469 700 aa12.58□□□□□ -0.4
TVP23C-206ENST00000521179 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
TVP23C-206ENST00000521179 PBX2P40425 430 aa12.57□□□□□ -0.4
TVP23C-206ENST00000521179 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
TVP23C-206ENST00000521179 NPDC1Q9NQX5 325 aaPredicted RBP12.56□□□□□ -0.4
TVP23C-206ENST00000521179 GPIHBP1Q8IV16 184 aa12.55□□□□□ -0.4
TVP23C-206ENST00000521179 CDHR5Q9HBB8 845 aa12.55□□□□□ -0.4
TVP23C-206ENST00000521179 PTGDRQ13258 359 aa12.54□□□□□ -0.4
TVP23C-206ENST00000521179 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
TVP23C-206ENST00000521179 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
TVP23C-206ENST00000521179 GPR37O15354 613 aa12.53□□□□□ -0.4
TVP23C-206ENST00000521179 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
TVP23C-206ENST00000521179 COL9A1P20849 921 aa12.52□□□□□ -0.41
TVP23C-206ENST00000521179 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
TVP23C-206ENST00000521179 FCHSD2O94868 740 aa12.51□□□□□ -0.41
TVP23C-206ENST00000521179 PSEN2P49810 448 aa12.51□□□□□ -0.41
TVP23C-206ENST00000521179 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
TVP23C-206ENST00000521179 ZC3H15Q8WU90 426 aaKnown RBP12.5□□□□□ -0.41
TVP23C-206ENST00000521179 HIC1Q14526 733 aa12.48□□□□□ -0.41
TVP23C-206ENST00000521179 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
TVP23C-206ENST00000521179 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.41
TVP23C-206ENST00000521179 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
TVP23C-206ENST00000521179 ZMYND10O75800 440 aa12.45□□□□□ -0.42
TVP23C-206ENST00000521179 PRSS12P56730 875 aa12.45□□□□□ -0.42
TVP23C-206ENST00000521179 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
TVP23C-206ENST00000521179 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
TVP23C-206ENST00000521179 GNPATO15228 680 aa12.44□□□□□ -0.42
TVP23C-206ENST00000521179 KRTAP3-3Q9BYR6 98 aa12.44□□□□□ -0.42
TVP23C-206ENST00000521179 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
TVP23C-206ENST00000521179 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
TVP23C-206ENST00000521179 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
TVP23C-206ENST00000521179 TTC13Q8NBP0 860 aa12.43□□□□□ -0.42
TVP23C-206ENST00000521179 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
TVP23C-206ENST00000521179 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
TVP23C-206ENST00000521179 TK2O00142 265 aa12.41□□□□□ -0.42
TVP23C-206ENST00000521179 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
TVP23C-206ENST00000521179 FECHP22830 423 aa12.4□□□□□ -0.42
TVP23C-206ENST00000521179 VPS9D1Q9Y2B5 631 aa12.4□□□□□ -0.42
TVP23C-206ENST00000521179 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
TVP23C-206ENST00000521179 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
TVP23C-206ENST00000521179 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
TVP23C-206ENST00000521179 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
TVP23C-206ENST00000521179 TSKSQ9UJT2 592 aa12.39□□□□□ -0.43
TVP23C-206ENST00000521179 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
TVP23C-206ENST00000521179 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
TVP23C-206ENST00000521179 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
TVP23C-206ENST00000521179 ANKRD13DQ6ZTN6 518 aa12.35□□□□□ -0.43
TVP23C-206ENST00000521179 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
TVP23C-206ENST00000521179 MINK1Q8N4C8 1332 aaPredicted RBP12.35□□□□□ -0.43
TVP23C-206ENST00000521179 MAP2K5Q13163 448 aa12.34□□□□□ -0.43
TVP23C-206ENST00000521179 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
TVP23C-206ENST00000521179 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
TVP23C-206ENST00000521179 HRO43593 1189 aa12.32□□□□□ -0.44
TVP23C-206ENST00000521179 IRF6O14896 467 aa12.31□□□□□ -0.44
TVP23C-206ENST00000521179 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
TVP23C-206ENST00000521179 ADGRG1Q9Y653 693 aa12.31□□□□□ -0.44
TVP23C-206ENST00000521179 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
TVP23C-206ENST00000521179 TATDN2Q93075 761 aa12.3□□□□□ -0.44
TVP23C-206ENST00000521179 C3orf80F5H4A9 247 aa12.29□□□□□ -0.44
TVP23C-206ENST00000521179 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
TVP23C-206ENST00000521179 OATP04181 439 aa12.28□□□□□ -0.44
TVP23C-206ENST00000521179 NUDT18Q6ZVK8 323 aa12.27□□□□□ -0.45
TVP23C-206ENST00000521179 EYA1Q99502 592 aa12.27□□□□□ -0.45
TVP23C-206ENST00000521179 SLC24A3Q9HC58 644 aa12.27□□□□□ -0.45
TVP23C-206ENST00000521179 PNMA3Q9UL41 463 aa12.27□□□□□ -0.45
TVP23C-206ENST00000521179 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
TVP23C-206ENST00000521179 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
TVP23C-206ENST00000521179 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
TVP23C-206ENST00000521179 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
TVP23C-206ENST00000521179 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
TVP23C-206ENST00000521179 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
TVP23C-206ENST00000521179 AK7Q96M32 723 aa12.25□□□□□ -0.45
TVP23C-206ENST00000521179 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
TVP23C-206ENST00000521179 SMAPO00193 183 aa12.23□□□□□ -0.45
TVP23C-206ENST00000521179 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
TVP23C-206ENST00000521179 MRPL50Q8N5N7 158 aaKnown RBP12.21□□□□□ -0.45
TVP23C-206ENST00000521179 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
TVP23C-206ENST00000521179 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
TVP23C-206ENST00000521179 PHOX2BQ99453 314 aa12.2□□□□□ -0.46
TVP23C-206ENST00000521179 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
TVP23C-206ENST00000521179 TRIM66O15016 1216 aa12.19□□□□□ -0.46
TVP23C-206ENST00000521179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
TVP23C-206ENST00000521179 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
TVP23C-206ENST00000521179 DNAJB2P25686 324 aa12.16□□□□□ -0.46
TVP23C-206ENST00000521179 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
TVP23C-206ENST00000521179 NACADO15069 1562 aa12.16□□□□□ -0.46
TVP23C-206ENST00000521179 AMHR2Q16671 573 aa12.15□□□□□ -0.46
TVP23C-206ENST00000521179 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
TVP23C-206ENST00000521179 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
TVP23C-206ENST00000521179 GOLGA8CPA6NN73 597 aa12.12□□□□□ -0.47
TVP23C-206ENST00000521179 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
TVP23C-206ENST00000521179 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
TVP23C-206ENST00000521179 PDE4DQ08499 809 aa12.1□□□□□ -0.47
TVP23C-206ENST00000521179 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
TVP23C-206ENST00000521179 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms