RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.12
AP3B1-204ENST00000519295 TAF7LQ5H9L4 462 aa8.08□□□□□ -1.12
AP3B1-204ENST00000519295 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
AP3B1-204ENST00000519295 PLEKHH2Q8IVE3 1493 aa8.08□□□□□ -1.12
AP3B1-204ENST00000519295 CNTLNQ9NXG0 1405 aa8.08□□□□□ -1.12
AP3B1-204ENST00000519295 FBXO3Q9UK99 471 aa8.07□□□□□ -1.12
AP3B1-204ENST00000519295 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
AP3B1-204ENST00000519295 SUPT6HQ7KZ85 1726 aaKnown RBP8.07□□□□□ -1.12
AP3B1-204ENST00000519295 PRDM15P57071 1507 aaPredicted RBP8.06□□□□□ -1.12
AP3B1-204ENST00000519295 PIK3C2BO00750 1634 aa8.06□□□□□ -1.12
AP3B1-204ENST00000519295 CENPBP07199 599 aaPredicted RBP8.05□□□□□ -1.12
AP3B1-204ENST00000519295 FBLN2P98095 1184 aa8.05□□□□□ -1.12
AP3B1-204ENST00000519295 CLTCQ00610 1675 aaKnown RBP8.05□□□□□ -1.12
AP3B1-204ENST00000519295 UGGT1Q9NYU2 1555 aa8.05□□□□□ -1.12
AP3B1-204ENST00000519295 DNMT1P26358 1616 aaKnown RBP8.05□□□□□ -1.12
AP3B1-204ENST00000519295 ATP7AQ04656 1500 aa8.05□□□□□ -1.12
AP3B1-204ENST00000519295 UBR1Q8IWV7 1749 aa8.04□□□□□ -1.12
AP3B1-204ENST00000519295 RANGAP1P46060 587 aaPredicted RBP8.04□□□□□ -1.12
AP3B1-204ENST00000519295 SHANK2Q9UPX8 1470 aa8.04□□□□□ -1.12
AP3B1-204ENST00000519295 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
AP3B1-204ENST00000519295 MBD5Q9P267 1494 aa8.03□□□□□ -1.12
AP3B1-204ENST00000519295 IGSF3O75054 1194 aa8.03□□□□□ -1.12
AP3B1-204ENST00000519295 CEP170BQ9Y4F5 1589 aaPredicted RBP8.03□□□□□ -1.12
AP3B1-204ENST00000519295 STRCP1A6NGW2 1772 aa8.03□□□□□ -1.12
AP3B1-204ENST00000519295 NCOA1Q15788 1441 aa8.03□□□□□ -1.12
AP3B1-204ENST00000519295 CDK13Q14004 1512 aaKnown RBP8.02□□□□□ -1.12
AP3B1-204ENST00000519295 CEP162Q5TB80 1403 aa8.02□□□□□ -1.13
AP3B1-204ENST00000519295 CAMSAP1Q5T5Y3 1602 aa8.02□□□□□ -1.13
AP3B1-204ENST00000519295 NEUROD1Q13562 356 aa8.02□□□□□ -1.13
AP3B1-204ENST00000519295 GCC2Q8IWJ2 1684 aa8.01□□□□□ -1.13
AP3B1-204ENST00000519295 CPS1P31327 1500 aa8.01□□□□□ -1.13
AP3B1-204ENST00000519295 TRHP20396 242 aaPredicted RBP8.01□□□□□ -1.13
AP3B1-204ENST00000519295 IQGAP3Q86VI3 1631 aa8.01□□□□□ -1.13
AP3B1-204ENST00000519295 SLIT1O75093 1534 aa8□□□□□ -1.13
AP3B1-204ENST00000519295 PRAG1Q86YV5 1406 aa8□□□□□ -1.13
AP3B1-204ENST00000519295 NPM1P06748 294 aaKnown RBP eCLIP8□□□□□ -1.13
AP3B1-204ENST00000519295 BRD2P25440 801 aaKnown RBP8□□□□□ -1.13
AP3B1-204ENST00000519295 UNC13BO14795 1591 aa7.99□□□□□ -1.13
AP3B1-204ENST00000519295 GPATCH8Q9UKJ3 1502 aaKnown RBP7.99□□□□□ -1.13
AP3B1-204ENST00000519295 IQGAP1P46940 1657 aa7.98□□□□□ -1.13
AP3B1-204ENST00000519295 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
AP3B1-204ENST00000519295 ARHGAP23Q9P227 1491 aa7.98□□□□□ -1.13
AP3B1-204ENST00000519295 EFCAB6Q5THR3 1501 aa7.97□□□□□ -1.13
AP3B1-204ENST00000519295 YEATS2Q9ULM3 1422 aa7.97□□□□□ -1.13
AP3B1-204ENST00000519295 ARHGAP31Q2M1Z3 1444 aa7.97□□□□□ -1.13
AP3B1-204ENST00000519295 PZPP20742 1482 aa7.97□□□□□ -1.13
AP3B1-204ENST00000519295 PTPRKQ15262 1439 aa7.96□□□□□ -1.13
AP3B1-204ENST00000519295 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
AP3B1-204ENST00000519295 DIP2AQ14689 1571 aa7.95□□□□□ -1.14
AP3B1-204ENST00000519295 TET3O43151 1660 aa7.94□□□□□ -1.14
AP3B1-204ENST00000519295 A2ML1A8K2U0 1454 aa7.94□□□□□ -1.14
AP3B1-204ENST00000519295 SYCP2Q9BX26 1530 aa7.94□□□□□ -1.14
AP3B1-204ENST00000519295 ADGRL2O95490 1459 aa7.94□□□□□ -1.14
AP3B1-204ENST00000519295 NLRP1Q9C000 1473 aa7.93□□□□□ -1.14
AP3B1-204ENST00000519295 CLIP1P30622 1438 aa7.93□□□□□ -1.14
AP3B1-204ENST00000519295 TRAPPC8Q9Y2L5 1435 aa7.93□□□□□ -1.14
AP3B1-204ENST00000519295 CEP152O94986 1710 aa7.92□□□□□ -1.14
AP3B1-204ENST00000519295 FBXO41Q8TF61 875 aa7.91□□□□□ -1.14
AP3B1-204ENST00000519295 CHD2O14647 1828 aaKnown RBP7.91□□□□□ -1.14
AP3B1-204ENST00000519295 ARHGAP5Q13017 1502 aa7.91□□□□□ -1.14
AP3B1-204ENST00000519295 UBTFP17480 764 aaKnown RBP7.91□□□□□ -1.14
AP3B1-204ENST00000519295 ABCC3O15438 1527 aa7.91□□□□□ -1.14
AP3B1-204ENST00000519295 SHPRHQ149N8 1683 aa7.9□□□□□ -1.14
AP3B1-204ENST00000519295 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.15
AP3B1-204ENST00000519295 BCANQ96GW7 911 aa7.89□□□□□ -1.15
AP3B1-204ENST00000519295 CCDC136Q96JN2 1154 aa7.89□□□□□ -1.15
AP3B1-204ENST00000519295 MIA2Q96PC5 1412 aa7.89□□□□□ -1.15
AP3B1-204ENST00000519295 PLCB2Q00722 1185 aa7.88□□□□□ -1.15
AP3B1-204ENST00000519295 IFT172Q9UG01 1749 aa7.88□□□□□ -1.15
AP3B1-204ENST00000519295 SCAPERQ9BY12 1400 aa7.88□□□□□ -1.15
AP3B1-204ENST00000519295 ERICH6BQ5W0A0 696 aa7.88□□□□□ -1.15
AP3B1-204ENST00000519295 XRN1Q8IZH2 1706 aaKnown RBP7.88□□□□□ -1.15
AP3B1-204ENST00000519295 A2MP01023 1474 aa7.87□□□□□ -1.15
AP3B1-204ENST00000519295 DUOX2Q9NRD8 1548 aa7.87□□□□□ -1.15
AP3B1-204ENST00000519295 NEFLP07196 543 aa7.86□□□□□ -1.15
AP3B1-204ENST00000519295 RNF216Q9NWF9 866 aaPredicted RBP7.86□□□□□ -1.15
AP3B1-204ENST00000519295 FOXD1Q16676 465 aa7.86□□□□□ -1.15
AP3B1-204ENST00000519295 C14orf37Q86TY3 774 aa7.86□□□□□ -1.15
AP3B1-204ENST00000519295 ERBINQ96RT1 1412 aa7.86□□□□□ -1.15
AP3B1-204ENST00000519295 KNDC1Q76NI1 1749 aa7.86□□□□□ -1.15
AP3B1-204ENST00000519295 RPRD2Q5VT52 1461 aaKnown RBP7.86□□□□□ -1.15
AP3B1-204ENST00000519295 CCDC141Q6ZP82 1450 aa7.85□□□□□ -1.15
AP3B1-204ENST00000519295 COL22A1Q8NFW1 1626 aaPredicted RBP7.85□□□□□ -1.15
AP3B1-204ENST00000519295 NHSL1Q5SYE7 1610 aa7.85□□□□□ -1.15
AP3B1-204ENST00000519295 KCNG1Q9UIX4 513 aa7.85□□□□□ -1.15
AP3B1-204ENST00000519295 UHRF1BP1Q6BDS2 1440 aa7.84□□□□□ -1.15
AP3B1-204ENST00000519295 NRXN3Q9Y4C0 1643 aa7.84□□□□□ -1.15
AP3B1-204ENST00000519295 TMEM131LA2VDJ0 1609 aa7.84□□□□□ -1.15
AP3B1-204ENST00000519295 ADGRB3O60242 1522 aa7.83□□□□□ -1.16
AP3B1-204ENST00000519295 NCOA3Q9Y6Q9 1424 aa7.83□□□□□ -1.16
AP3B1-204ENST00000519295 AHDC1Q5TGY3 1603 aaPredicted RBP7.83□□□□□ -1.16
AP3B1-204ENST00000519295 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.82□□□□□ -1.16
AP3B1-204ENST00000519295 MARF1Q9Y4F3 1742 aaKnown RBP7.82□□□□□ -1.16
AP3B1-204ENST00000519295 MED1Q15648 1581 aaPredicted RBP7.82□□□□□ -1.16
AP3B1-204ENST00000519295 ZMYND15Q9H091 742 aa7.82□□□□□ -1.16
AP3B1-204ENST00000519295 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
AP3B1-204ENST00000519295 SETBP1Q9Y6X0 1596 aa7.81□□□□□ -1.16
AP3B1-204ENST00000519295 ERVK-7P63135 1459 aa7.8□□□□□ -1.16
AP3B1-204ENST00000519295 NKTRP30414 1462 aaKnown RBP7.8□□□□□ -1.16
AP3B1-204ENST00000519295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.8□□□□□ -1.165e-6■■■□□ 14.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms