RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PDCD7Q8N8D1 485 aaKnown RBP8.6□□□□□ -1.03
HMGB1P23-201ENST00000518743 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
HMGB1P23-201ENST00000518743 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
HMGB1P23-201ENST00000518743 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
HMGB1P23-201ENST00000518743 FANCD2Q9BXW9 1451 aa8.58□□□□□ -1.04
HMGB1P23-201ENST00000518743 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
HMGB1P23-201ENST00000518743 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
HMGB1P23-201ENST00000518743 DPY19L2Q6NUT2 758 aa8.58□□□□□ -1.04
HMGB1P23-201ENST00000518743 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
HMGB1P23-201ENST00000518743 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P23-201ENST00000518743 ZNF316A6NFI3 1004 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P23-201ENST00000518743 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
HMGB1P23-201ENST00000518743 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
HMGB1P23-201ENST00000518743 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
HMGB1P23-201ENST00000518743 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
HMGB1P23-201ENST00000518743 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
HMGB1P23-201ENST00000518743 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
HMGB1P23-201ENST00000518743 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
HMGB1P23-201ENST00000518743 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
HMGB1P23-201ENST00000518743 EIF4G3O43432 1585 aaKnown RBP8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 NUTM2FA1L443 756 aa8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 SUPT5HO00267 1087 aaKnown RBP8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 TBC1D12O60347 775 aa8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 HIC1Q14526 733 aa8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 TMEM121BQ9BXQ6 578 aaPredicted RBP8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 KDM6BO15054 1643 aa8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
HMGB1P23-201ENST00000518743 GNPATO15228 680 aa8.53□□□□□ -1.04
HMGB1P23-201ENST00000518743 FCHSD2O94868 740 aa8.53□□□□□ -1.04
HMGB1P23-201ENST00000518743 AMHR2Q16671 573 aa8.53□□□□□ -1.04
HMGB1P23-201ENST00000518743 L3MBTL3Q96JM7 780 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P23-201ENST00000518743 IFT140Q96RY7 1462 aa8.52□□□□□ -1.05
HMGB1P23-201ENST00000518743 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
HMGB1P23-201ENST00000518743 IRF6O14896 467 aa8.52□□□□□ -1.05
HMGB1P23-201ENST00000518743 PTGER2P43116 358 aa8.52□□□□□ -1.05
HMGB1P23-201ENST00000518743 FLIIQ13045 1269 aa8.52□□□□□ -1.05
HMGB1P23-201ENST00000518743 GPR37O15354 613 aa8.51□□□□□ -1.05
HMGB1P23-201ENST00000518743 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
HMGB1P23-201ENST00000518743 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
HMGB1P23-201ENST00000518743 KIF3CO14782 793 aa8.5□□□□□ -1.05
HMGB1P23-201ENST00000518743 SLAIN1Q8ND83 568 aa8.5□□□□□ -1.05
HMGB1P23-201ENST00000518743 CCDC102AQ96A19 550 aa8.5□□□□□ -1.05
HMGB1P23-201ENST00000518743 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
HMGB1P23-201ENST00000518743 CLASP1Q7Z460 1538 aa8.46□□□□□ -1.05
HMGB1P23-201ENST00000518743 OSBPP22059 807 aa8.46□□□□□ -1.06
HMGB1P23-201ENST00000518743 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
HMGB1P23-201ENST00000518743 OXER1Q8TDS5 423 aa8.46□□□□□ -1.06
HMGB1P23-201ENST00000518743 FAM117AQ9C073 453 aa8.46□□□□□ -1.06
HMGB1P23-201ENST00000518743 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.46□□□□□ -1.06
HMGB1P23-201ENST00000518743 SYNJ1O43426 1573 aa8.45□□□□□ -1.06
HMGB1P23-201ENST00000518743 FAM69CQ0P6D2 419 aa8.45□□□□□ -1.06
HMGB1P23-201ENST00000518743 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P23-201ENST00000518743 PARP9Q8IXQ6 854 aa8.44□□□□□ -1.06
HMGB1P23-201ENST00000518743 FAM163AQ96GL9 167 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P23-201ENST00000518743 TSPOAP1O95153 1857 aa8.43□□□□□ -1.06
HMGB1P23-201ENST00000518743 UPF1Q92900 1129 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMGB1P23-201ENST00000518743 AQRO60306 1485 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMGB1P23-201ENST00000518743 PEG3Q9GZU2 1588 aa8.41□□□□□ -1.06
HMGB1P23-201ENST00000518743 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P23-201ENST00000518743 EVI5O60447 810 aa8.4□□□□□ -1.06
HMGB1P23-201ENST00000518743 PTGDRQ13258 359 aa8.4□□□□□ -1.06
HMGB1P23-201ENST00000518743 DDX12PQ92771 950 aa8.4□□□□□ -1.06
HMGB1P23-201ENST00000518743 EPAS1Q99814 870 aa8.4□□□□□ -1.06
HMGB1P23-201ENST00000518743 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
HMGB1P23-201ENST00000518743 CLCN1P35523 988 aa8.39□□□□□ -1.07
HMGB1P23-201ENST00000518743 CHMP7Q8WUX9 453 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P23-201ENST00000518743 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P23-201ENST00000518743 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
HMGB1P23-201ENST00000518743 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
HMGB1P23-201ENST00000518743 PHF14O94880 888 aa8.35□□□□□ -1.07
HMGB1P23-201ENST00000518743 SLC34A2O95436 690 aa8.35□□□□□ -1.07
HMGB1P23-201ENST00000518743 TMEM92Q6UXU6 159 aa8.35□□□□□ -1.07
HMGB1P23-201ENST00000518743 ANO8Q9HCE9 1232 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P23-201ENST00000518743 A6NJR5 290 aa8.34□□□□□ -1.07
HMGB1P23-201ENST00000518743 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
HMGB1P23-201ENST00000518743 CERKQ8TCT0 537 aa8.34□□□□□ -1.07
HMGB1P23-201ENST00000518743 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
HMGB1P23-201ENST00000518743 ABCC10Q5T3U5 1492 aa8.33□□□□□ -1.08
HMGB1P23-201ENST00000518743 EN1Q05925 392 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P23-201ENST00000518743 SNAPC4Q5SXM2 1469 aa8.32□□□□□ -1.08
HMGB1P23-201ENST00000518743 POTEMA6NI47 508 aa8.32□□□□□ -1.08
HMGB1P23-201ENST00000518743 ST18O60284 1047 aa8.32□□□□□ -1.08
HMGB1P23-201ENST00000518743 FECHP22830 423 aa8.32□□□□□ -1.08
HMGB1P23-201ENST00000518743 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
HMGB1P23-201ENST00000518743 CFTRP13569 1480 aa8.32□□□□□ -1.08
HMGB1P23-201ENST00000518743 MAP3K7O43318 606 aa8.31□□□□□ -1.08
HMGB1P23-201ENST00000518743 OATP04181 439 aa8.31□□□□□ -1.08
HMGB1P23-201ENST00000518743 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
HMGB1P23-201ENST00000518743 DIP2BQ9P265 1576 aa8.31□□□□□ -1.08
HMGB1P23-201ENST00000518743 TOP2BQ02880 1626 aa8.3□□□□□ -1.08
HMGB1P23-201ENST00000518743 UBTFP17480 764 aaKnown RBP8.3□□□□□ -1.08
HMGB1P23-201ENST00000518743 DIXDC1Q155Q3 683 aa8.3□□□□□ -1.08
HMGB1P23-201ENST00000518743 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
HMGB1P23-201ENST00000518743 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
HMGB1P23-201ENST00000518743 TYW1BQ6NUM6 668 aa8.29□□□□□ -1.08
HMGB1P23-201ENST00000518743 MROH2BQ7Z745 1585 aa8.29□□□□□ -1.08
HMGB1P23-201ENST00000518743 APBB1O00213 710 aa8.28□□□□□ -1.08
HMGB1P23-201ENST00000518743 SNPHO15079 494 aa8.28□□□□□ -1.08
HMGB1P23-201ENST00000518743 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P23-201ENST00000518743 MS4A1P11836 297 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms