RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TPRNQ4KMQ1 711 aa15.42■□□□□ 0.06
PCDHGA6-201ENST00000517434 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
PCDHGA6-201ENST00000517434 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
PCDHGA6-201ENST00000517434 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
PCDHGA6-201ENST00000517434 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA6-201ENST00000517434 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCDHGA6-201ENST00000517434 FRAT1Q92837 279 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA6-201ENST00000517434 STK31Q9BXU1 1019 aa15.39■□□□□ 0.05
PCDHGA6-201ENST00000517434 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
PCDHGA6-201ENST00000517434 EVC2Q86UK5 1308 aa15.39■□□□□ 0.05
PCDHGA6-201ENST00000517434 SLKQ9H2G2 1235 aaPredicted RBP15.38■□□□□ 0.05
PCDHGA6-201ENST00000517434 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
PCDHGA6-201ENST00000517434 EVA1CP58658 441 aa15.37■□□□□ 0.05
PCDHGA6-201ENST00000517434 FGD1P98174 961 aa15.37■□□□□ 0.05
PCDHGA6-201ENST00000517434 POGZQ7Z3K3 1410 aa15.37■□□□□ 0.05
PCDHGA6-201ENST00000517434 ATF3P18847 181 aa15.37■□□□□ 0.05
PCDHGA6-201ENST00000517434 KCNJ4P48050 445 aa15.37■□□□□ 0.05
PCDHGA6-201ENST00000517434 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
PCDHGA6-201ENST00000517434 FOXD1Q16676 465 aa15.36■□□□□ 0.05
PCDHGA6-201ENST00000517434 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
PCDHGA6-201ENST00000517434 MEX3CQ5U5Q3 659 aaKnown RBP15.36■□□□□ 0.05
PCDHGA6-201ENST00000517434 SPRYD3Q8NCJ5 442 aa15.36■□□□□ 0.05
PCDHGA6-201ENST00000517434 GOLGA6L4A6NEF3 574 aa15.35■□□□□ 0.05
PCDHGA6-201ENST00000517434 KIF21BO75037 1637 aa15.34■□□□□ 0.05
PCDHGA6-201ENST00000517434 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
PCDHGA6-201ENST00000517434 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
PCDHGA6-201ENST00000517434 COG3Q96JB2 828 aa15.33■□□□□ 0.05
PCDHGA6-201ENST00000517434 CUX1P39880 1505 aa15.33■□□□□ 0.04
PCDHGA6-201ENST00000517434 ZNF330Q9Y3S2 320 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA6-201ENST00000517434 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 NUTM2DQ5VT03 806 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA6-201ENST00000517434 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
PCDHGA6-201ENST00000517434 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA6-201ENST00000517434 MCCP23508 829 aa15.3■□□□□ 0.04
PCDHGA6-201ENST00000517434 G3V3G9 751 aa15.29■□□□□ 0.04
PCDHGA6-201ENST00000517434 PSME1Q06323 249 aa15.29■□□□□ 0.04
PCDHGA6-201ENST00000517434 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
PCDHGA6-201ENST00000517434 C1orf141Q5JVX7 400 aa15.29■□□□□ 0.04
PCDHGA6-201ENST00000517434 DHX57Q6P158 1386 aaKnown RBP15.29■□□□□ 0.04
PCDHGA6-201ENST00000517434 KIF15Q9NS87 1388 aa15.29■□□□□ 0.04
PCDHGA6-201ENST00000517434 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
PCDHGA6-201ENST00000517434 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
PCDHGA6-201ENST00000517434 PODXL2Q9NZ53 605 aa15.28■□□□□ 0.04
PCDHGA6-201ENST00000517434 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
PCDHGA6-201ENST00000517434 TOPBP1Q92547 1522 aa15.27■□□□□ 0.03
PCDHGA6-201ENST00000517434 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
PCDHGA6-201ENST00000517434 HMMRO75330 724 aa15.25■□□□□ 0.03
PCDHGA6-201ENST00000517434 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
PCDHGA6-201ENST00000517434 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
PCDHGA6-201ENST00000517434 GORABQ5T7V8 394 aa15.25■□□□□ 0.03
PCDHGA6-201ENST00000517434 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
PCDHGA6-201ENST00000517434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 A0A0U1RQG5 324 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 ARHGAP5Q13017 1502 aa15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 NESP48681 1621 aa15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 CASKIN1Q8WXD9 1431 aa15.24■□□□□ 0.03
PCDHGA6-201ENST00000517434 DDX11L8A8MPP1 907 aa15.23■□□□□ 0.03
PCDHGA6-201ENST00000517434 FYCO1Q9BQS8 1478 aa15.23■□□□□ 0.03
PCDHGA6-201ENST00000517434 TEFQ10587 303 aa15.22■□□□□ 0.03
PCDHGA6-201ENST00000517434 KIAA1211Q6ZU35 1233 aa15.21■□□□□ 0.03
PCDHGA6-201ENST00000517434 MAP7D2Q96T17 732 aa15.21■□□□□ 0.03
PCDHGA6-201ENST00000517434 ZNF771Q7L3S4 317 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA6-201ENST00000517434 GOLGA6L1Q8N7Z2 621 aa15.21■□□□□ 0.03
PCDHGA6-201ENST00000517434 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
PCDHGA6-201ENST00000517434 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.02
PCDHGA6-201ENST00000517434 ISY1Q9ULR0 285 aaKnown RBP15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 TTC5Q8N0Z6 440 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 SLC52A1Q9NWF4 448 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 MIA2Q96PC5 1412 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
PCDHGA6-201ENST00000517434 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 FAM13BQ9NYF5 915 aa15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 ANKRD50Q9ULJ7 1429 aa15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 PDE4AP27815 886 aa15.19■□□□□ 0.02
PCDHGA6-201ENST00000517434 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA6-201ENST00000517434 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
PCDHGA6-201ENST00000517434 NAP1L2Q9ULW6 460 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA6-201ENST00000517434 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA6-201ENST00000517434 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
PCDHGA6-201ENST00000517434 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA6-201ENST00000517434 MTERF4Q7Z6M4 381 aaKnown RBP15.17■□□□□ 0.02
PCDHGA6-201ENST00000517434 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
PCDHGA6-201ENST00000517434 SKOR2Q2VWA4 1001 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA6-201ENST00000517434 RWDD1Q9H446 243 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms