RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 PPP1R3GB7ZBB8 358 aa7.31□□□□□ -1.24
SNORA40.14-201ENST00000516543 TYW1BQ6NUM6 668 aa7.31□□□□□ -1.24
SNORA40.14-201ENST00000516543 MRPL50Q8N5N7 158 aaKnown RBP7.3□□□□□ -1.24
SNORA40.14-201ENST00000516543 RBM33Q96EV2 1170 aaKnown RBP7.3□□□□□ -1.24
SNORA40.14-201ENST00000516543 C6orf132Q5T0Z8 1188 aa7.29□□□□□ -1.24
SNORA40.14-201ENST00000516543 THSD4Q6ZMP0 1018 aa7.29□□□□□ -1.24
SNORA40.14-201ENST00000516543 WNT2BQ93097 391 aa7.28□□□□□ -1.24
SNORA40.14-201ENST00000516543 FBXW7Q969H0 707 aa7.28□□□□□ -1.24
SNORA40.14-201ENST00000516543 GOLGA8CPA6NN73 597 aa7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 PRIM1P49642 420 aaKnown RBP7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 PDIA6Q15084 440 aa7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 TSR1Q2NL82 804 aaKnown RBP7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 EPAS1Q99814 870 aa7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 NBPF3Q9H094 633 aa7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 KIAA1468Q9P260 1216 aa7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 RABGEF1Q9UJ41 708 aa7.26□□□□□ -1.25
SNORA40.14-201ENST00000516543 NBR1Q14596 966 aa7.25□□□□□ -1.25
SNORA40.14-201ENST00000516543 E2F4Q16254 413 aa7.25□□□□□ -1.25
SNORA40.14-201ENST00000516543 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
SNORA40.14-201ENST00000516543 BCAMP50895 628 aa7.23□□□□□ -1.25
SNORA40.14-201ENST00000516543 EN1Q05925 392 aaPredicted RBP7.23□□□□□ -1.25
SNORA40.14-201ENST00000516543 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
SNORA40.14-201ENST00000516543 TRIM6-TRIM34B2RNG4 842 aa7.21□□□□□ -1.26
SNORA40.14-201ENST00000516543 MAP3K7O43318 606 aa7.21□□□□□ -1.26
SNORA40.14-201ENST00000516543 WDR70Q9NW82 654 aa7.21□□□□□ -1.26
SNORA40.14-201ENST00000516543 TSKSQ9UJT2 592 aa7.21□□□□□ -1.26
SNORA40.14-201ENST00000516543 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
SNORA40.14-201ENST00000516543 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
SNORA40.14-201ENST00000516543 TSHZ2Q9NRE2 1034 aa7.2□□□□□ -1.26
SNORA40.14-201ENST00000516543 C3orf80F5H4A9 247 aa7.19□□□□□ -1.26
SNORA40.14-201ENST00000516543 ANKK1Q8NFD2 765 aa7.19□□□□□ -1.26
SNORA40.14-201ENST00000516543 FAM198AQ9UFP1 575 aa7.19□□□□□ -1.26
SNORA40.14-201ENST00000516543 ARIH1Q9Y4X5 557 aaPredicted RBP7.19□□□□□ -1.26
SNORA40.14-201ENST00000516543 ONECUT3O60422 494 aaPredicted RBP7.18□□□□□ -1.26
SNORA40.14-201ENST00000516543 LAPTM4BQ86VI4 370 aa7.18□□□□□ -1.26
SNORA40.14-201ENST00000516543 CDHR5Q9HBB8 845 aa7.18□□□□□ -1.26
SNORA40.14-201ENST00000516543 SOWAHBA6NEL2 793 aa7.17□□□□□ -1.26
SNORA40.14-201ENST00000516543 SMAPO00193 183 aa7.17□□□□□ -1.26
SNORA40.14-201ENST00000516543 OSBPP22059 807 aa7.17□□□□□ -1.26
SNORA40.14-201ENST00000516543 WBP1LQ9NX94 342 aa7.16□□□□□ -1.26
SNORA40.14-201ENST00000516543 FAM98CQ17RN3 349 aaKnown RBP7.15□□□□□ -1.26
SNORA40.14-201ENST00000516543 CDCA7LQ96GN5 454 aa7.15□□□□□ -1.26
SNORA40.14-201ENST00000516543 PRSS12P56730 875 aa7.13□□□□□ -1.27
SNORA40.14-201ENST00000516543 IFFO2Q5TF58 517 aa7.12□□□□□ -1.27
SNORA40.14-201ENST00000516543 PACS2Q86VP3 889 aa7.12□□□□□ -1.27
SNORA40.14-201ENST00000516543 KCNV2Q8TDN2 545 aa7.12□□□□□ -1.27
SNORA40.14-201ENST00000516543 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.12□□□□□ -1.27
SNORA40.14-201ENST00000516543 HPS5Q9UPZ3 1129 aa7.12□□□□□ -1.27
SNORA40.14-201ENST00000516543 A0A0G2JS52 829 aa7.11□□□□□ -1.27
SNORA40.14-201ENST00000516543 MLLT3P42568 568 aaPredicted RBP7.11□□□□□ -1.27
SNORA40.14-201ENST00000516543 ITGBL1O95965 494 aaPredicted RBP7.1□□□□□ -1.27
SNORA40.14-201ENST00000516543 TATDN2Q93075 761 aa7.1□□□□□ -1.27
SNORA40.14-201ENST00000516543 LRCH3Q96II8 777 aa7.1□□□□□ -1.27
SNORA40.14-201ENST00000516543 NPDC1Q9NQX5 325 aaPredicted RBP7.1□□□□□ -1.27
SNORA40.14-201ENST00000516543 PNMA3Q9UL41 463 aa7.1□□□□□ -1.27
SNORA40.14-201ENST00000516543 SAMD7Q7Z3H4 446 aa7.09□□□□□ -1.27
SNORA40.14-201ENST00000516543 TSR3Q9UJK0 312 aaKnown RBP7.09□□□□□ -1.27
SNORA40.14-201ENST00000516543 NUDT18Q6ZVK8 323 aa7.08□□□□□ -1.28
SNORA40.14-201ENST00000516543 CERKQ8TCT0 537 aa7.08□□□□□ -1.28
SNORA40.14-201ENST00000516543 PADI6Q6TGC4 694 aa7.07□□□□□ -1.28
SNORA40.14-201ENST00000516543 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
SNORA40.14-201ENST00000516543 NBPF26B4DH59 902 aa7.05□□□□□ -1.28
SNORA40.14-201ENST00000516543 PPP4CP60510 307 aa7.05□□□□□ -1.28
SNORA40.14-201ENST00000516543 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
SNORA40.14-201ENST00000516543 TTC13Q8NBP0 860 aa7.05□□□□□ -1.28
SNORA40.14-201ENST00000516543 KCNC4Q03721 635 aa7.04□□□□□ -1.28
SNORA40.14-201ENST00000516543 RBM27Q9P2N5 1060 aaKnown RBP7.03□□□□□ -1.28
SNORA40.14-201ENST00000516543 RNF40O75150 1001 aa7.02□□□□□ -1.29
SNORA40.14-201ENST00000516543 TJAP1Q5JTD0 557 aa7.01□□□□□ -1.29
SNORA40.14-201ENST00000516543 SWT1Q5T5J6 900 aaKnown RBP7.01□□□□□ -1.29
SNORA40.14-201ENST00000516543 SEMA3EO15041 775 aa7□□□□□ -1.29
SNORA40.14-201ENST00000516543 RGS20O76081 388 aa7□□□□□ -1.29
SNORA40.14-201ENST00000516543 APLP1P51693 650 aa7□□□□□ -1.29
SNORA40.14-201ENST00000516543 PTGDRQ13258 359 aa7□□□□□ -1.29
SNORA40.14-201ENST00000516543 ZNF516Q92618 1163 aa7□□□□□ -1.29
SNORA40.14-201ENST00000516543 EYA1Q99502 592 aa7□□□□□ -1.29
SNORA40.14-201ENST00000516543 FAM161AQ3B820 660 aa6.99□□□□□ -1.29
SNORA40.14-201ENST00000516543 MTRQ99707 1265 aa6.99□□□□□ -1.29
SNORA40.14-201ENST00000516543 IRX2Q9BZI1 471 aaPredicted RBP6.98□□□□□ -1.29
SNORA40.14-201ENST00000516543 NUTM2FA1L443 756 aa6.97□□□□□ -1.29
SNORA40.14-201ENST00000516543 PLCB2Q00722 1185 aa6.97□□□□□ -1.29
SNORA40.14-201ENST00000516543 HDGFP51858 240 aaKnown RBP6.96□□□□□ -1.3
SNORA40.14-201ENST00000516543 NKX2-3Q8TAU0 364 aa6.96□□□□□ -1.3
SNORA40.14-201ENST00000516543 COPS2P61201 443 aa6.94□□□□□ -1.3
SNORA40.14-201ENST00000516543 IL21Q9HBE4 155 aa6.94□□□□□ -1.3
SNORA40.14-201ENST00000516543 ADGRG1Q9Y653 693 aa6.94□□□□□ -1.3
SNORA40.14-201ENST00000516543 RBM26Q5T8P6 1007 aaKnown RBP6.93□□□□□ -1.3
SNORA40.14-201ENST00000516543 PPP1R18Q6NYC8 613 aa6.93□□□□□ -1.3
SNORA40.14-201ENST00000516543 P3H3Q8IVL6 736 aa6.93□□□□□ -1.3
SNORA40.14-201ENST00000516543 SLF2Q8IX21 1173 aa6.93□□□□□ -1.3
SNORA40.14-201ENST00000516543 RCCD1A6NED2 376 aa6.91□□□□□ -1.3
SNORA40.14-201ENST00000516543 TESPA1A2RU30 521 aaPredicted RBP6.9□□□□□ -1.3
SNORA40.14-201ENST00000516543 FECHP22830 423 aa6.9□□□□□ -1.3
SNORA40.14-201ENST00000516543 DNAJB2P25686 324 aa6.9□□□□□ -1.3
SNORA40.14-201ENST00000516543 RBM46Q8TBY0 533 aaKnown RBP6.9□□□□□ -1.3
SNORA40.14-201ENST00000516543 TMEM134Q9H6X4 195 aa6.9□□□□□ -1.3
SNORA40.14-201ENST00000516543 FCHSD2O94868 740 aa6.89□□□□□ -1.31
SNORA40.14-201ENST00000516543 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
SNORA40.14-201ENST00000516543 PRKD2Q9BZL6 878 aa6.89□□□□□ -1.31
SNORA40.14-201ENST00000516543 KDM2AQ9Y2K7 1162 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms