RNA–Protein interactions for RNA: ENST00000515860.1

LINC00500-201, long intergenic non-protein coding RNA 500, humanhuman

TSL 4 BASIC

Gene LINC00500, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00500-201ENST00000515860 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
LINC00500-201ENST00000515860 KHSRPQ92945 711 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00500-201ENST00000515860 NUDT7P0C024 238 aa11.99□□□□□ -0.49
LINC00500-201ENST00000515860 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
LINC00500-201ENST00000515860 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
LINC00500-201ENST00000515860 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
LINC00500-201ENST00000515860 KRI1Q8N9T8 703 aaKnown RBP11.98□□□□□ -0.49
LINC00500-201ENST00000515860 FCHSD2O94868 740 aa11.97□□□□□ -0.49
LINC00500-201ENST00000515860 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
LINC00500-201ENST00000515860 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00500-201ENST00000515860 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
LINC00500-201ENST00000515860 FOSBP53539 338 aa11.95□□□□□ -0.5
LINC00500-201ENST00000515860 HIC1Q14526 733 aa11.95□□□□□ -0.5
LINC00500-201ENST00000515860 AK7Q96M32 723 aa11.95□□□□□ -0.5
LINC00500-201ENST00000515860 MAP3K7O43318 606 aa11.94□□□□□ -0.5
LINC00500-201ENST00000515860 PTGDRQ13258 359 aa11.94□□□□□ -0.5
LINC00500-201ENST00000515860 GNPATO15228 680 aa11.93□□□□□ -0.5
LINC00500-201ENST00000515860 PBX2P40425 430 aa11.93□□□□□ -0.5
LINC00500-201ENST00000515860 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
LINC00500-201ENST00000515860 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
LINC00500-201ENST00000515860 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
LINC00500-201ENST00000515860 MAP2K5Q13163 448 aa11.9□□□□□ -0.5
LINC00500-201ENST00000515860 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.5
LINC00500-201ENST00000515860 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
LINC00500-201ENST00000515860 MINK1Q8N4C8 1332 aaPredicted RBP11.89□□□□□ -0.51
LINC00500-201ENST00000515860 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
LINC00500-201ENST00000515860 TSR1Q2NL82 804 aaKnown RBP11.88□□□□□ -0.51
LINC00500-201ENST00000515860 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
LINC00500-201ENST00000515860 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
LINC00500-201ENST00000515860 FECHP22830 423 aa11.86□□□□□ -0.51
LINC00500-201ENST00000515860 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
LINC00500-201ENST00000515860 IRF6O14896 467 aa11.85□□□□□ -0.51
LINC00500-201ENST00000515860 C6orf132Q5T0Z8 1188 aa11.85□□□□□ -0.51
LINC00500-201ENST00000515860 TRIM66O15016 1216 aa11.84□□□□□ -0.51
LINC00500-201ENST00000515860 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
LINC00500-201ENST00000515860 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
LINC00500-201ENST00000515860 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
LINC00500-201ENST00000515860 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
LINC00500-201ENST00000515860 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
LINC00500-201ENST00000515860 PDE4DQ08499 809 aa11.79□□□□□ -0.52
LINC00500-201ENST00000515860 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
LINC00500-201ENST00000515860 POTEEQ6S8J3 1075 aa11.78□□□□□ -0.52
LINC00500-201ENST00000515860 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
LINC00500-201ENST00000515860 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
LINC00500-201ENST00000515860 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
LINC00500-201ENST00000515860 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
LINC00500-201ENST00000515860 AMHR2Q16671 573 aa11.75□□□□□ -0.53
LINC00500-201ENST00000515860 ADGRD1Q6QNK2 874 aa11.75□□□□□ -0.53
LINC00500-201ENST00000515860 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
LINC00500-201ENST00000515860 PLA2G2EQ9NZK7 142 aa11.74□□□□□ -0.53
LINC00500-201ENST00000515860 PTPREP23469 700 aa11.73□□□□□ -0.53
LINC00500-201ENST00000515860 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
LINC00500-201ENST00000515860 PRSS12P56730 875 aa11.72□□□□□ -0.53
LINC00500-201ENST00000515860 TTC13Q8NBP0 860 aa11.72□□□□□ -0.53
LINC00500-201ENST00000515860 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
LINC00500-201ENST00000515860 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
LINC00500-201ENST00000515860 COL9A1P20849 921 aa11.71□□□□□ -0.53
LINC00500-201ENST00000515860 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
LINC00500-201ENST00000515860 TK2O00142 265 aa11.68□□□□□ -0.54
LINC00500-201ENST00000515860 OATP04181 439 aa11.68□□□□□ -0.54
LINC00500-201ENST00000515860 PARP9Q8IXQ6 854 aa11.68□□□□□ -0.54
LINC00500-201ENST00000515860 ADGRG1Q9Y653 693 aa11.68□□□□□ -0.54
LINC00500-201ENST00000515860 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
LINC00500-201ENST00000515860 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
LINC00500-201ENST00000515860 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
LINC00500-201ENST00000515860 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
LINC00500-201ENST00000515860 DAXXQ9UER7 740 aaPredicted RBP11.66□□□□□ -0.54
LINC00500-201ENST00000515860 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
LINC00500-201ENST00000515860 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
LINC00500-201ENST00000515860 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
LINC00500-201ENST00000515860 PHOX2BQ99453 314 aa11.64□□□□□ -0.55
LINC00500-201ENST00000515860 CLCN1P35523 988 aa11.63□□□□□ -0.55
LINC00500-201ENST00000515860 PSEN2P49810 448 aa11.63□□□□□ -0.55
LINC00500-201ENST00000515860 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
LINC00500-201ENST00000515860 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
LINC00500-201ENST00000515860 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
LINC00500-201ENST00000515860 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
LINC00500-201ENST00000515860 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
LINC00500-201ENST00000515860 HRO43593 1189 aa11.61□□□□□ -0.55
LINC00500-201ENST00000515860 GIGYF2Q6Y7W6 1299 aaKnown RBP11.61□□□□□ -0.55
LINC00500-201ENST00000515860 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
LINC00500-201ENST00000515860 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
LINC00500-201ENST00000515860 MDM2Q00987 491 aaPredicted RBP11.6□□□□□ -0.55
LINC00500-201ENST00000515860 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
LINC00500-201ENST00000515860 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
LINC00500-201ENST00000515860 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
LINC00500-201ENST00000515860 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
LINC00500-201ENST00000515860 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
LINC00500-201ENST00000515860 PACS2Q86VP3 889 aa11.58□□□□□ -0.56
LINC00500-201ENST00000515860 DDRGK1Q96HY6 314 aa11.58□□□□□ -0.56
LINC00500-201ENST00000515860 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
LINC00500-201ENST00000515860 FAM117AQ9C073 453 aa11.58□□□□□ -0.56
LINC00500-201ENST00000515860 PROX2Q3B8N5 592 aa11.57□□□□□ -0.56
LINC00500-201ENST00000515860 EYA1Q99502 592 aa11.57□□□□□ -0.56
LINC00500-201ENST00000515860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.56□□□□□ -0.56
LINC00500-201ENST00000515860 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
LINC00500-201ENST00000515860 NLRP7Q8WX94 980 aa11.56□□□□□ -0.56
LINC00500-201ENST00000515860 GTF3C3Q9Y5Q9 886 aa11.56□□□□□ -0.56
LINC00500-201ENST00000515860 MS4A1P11836 297 aa11.55□□□□□ -0.56
LINC00500-201ENST00000515860 TATDN2Q93075 761 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms