RNA–Protein interactions for RNA: ENST00000515728.1

LINC01216-201, Transcript of long intergenic non-protein coding RNA 1216, humanhuman

TSL 5 BASIC

Gene LINC01216, Length 824 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01216-201ENST00000515728 CAMK2BQ13554 666 aa13.91□□□□□ -0.18
LINC01216-201ENST00000515728 SPRYD3Q8NCJ5 442 aa13.91□□□□□ -0.18
LINC01216-201ENST00000515728 ONECUT3O60422 494 aaPredicted RBP13.89□□□□□ -0.19
LINC01216-201ENST00000515728 ANKK1Q8NFD2 765 aa13.89□□□□□ -0.19
LINC01216-201ENST00000515728 LAPTM4BQ86VI4 370 aa13.88□□□□□ -0.19
LINC01216-201ENST00000515728 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
LINC01216-201ENST00000515728 DPYSL4O14531 572 aa13.85□□□□□ -0.19
LINC01216-201ENST00000515728 RGS20O76081 388 aa13.85□□□□□ -0.19
LINC01216-201ENST00000515728 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
LINC01216-201ENST00000515728 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
LINC01216-201ENST00000515728 WDR70Q9NW82 654 aa13.83□□□□□ -0.2
LINC01216-201ENST00000515728 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
LINC01216-201ENST00000515728 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
LINC01216-201ENST00000515728 COL9A1P20849 921 aa13.79□□□□□ -0.2
LINC01216-201ENST00000515728 PROX2Q3B8N5 592 aa13.79□□□□□ -0.2
LINC01216-201ENST00000515728 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
LINC01216-201ENST00000515728 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
LINC01216-201ENST00000515728 PACS2Q86VP3 889 aa13.75□□□□□ -0.21
LINC01216-201ENST00000515728 DDX12PQ92771 950 aa13.75□□□□□ -0.21
LINC01216-201ENST00000515728 SOWAHBA6NEL2 793 aa13.73□□□□□ -0.21
LINC01216-201ENST00000515728 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
LINC01216-201ENST00000515728 ZFRQ96KR1 1074 aaKnown RBP13.73□□□□□ -0.21
LINC01216-201ENST00000515728 MAP3K7O43318 606 aa13.72□□□□□ -0.21
LINC01216-201ENST00000515728 E2F4Q16254 413 aa13.72□□□□□ -0.21
LINC01216-201ENST00000515728 NBR1Q14596 966 aa13.71□□□□□ -0.21
LINC01216-201ENST00000515728 PDIA6Q15084 440 aa13.71□□□□□ -0.21
LINC01216-201ENST00000515728 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
LINC01216-201ENST00000515728 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
LINC01216-201ENST00000515728 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
LINC01216-201ENST00000515728 A0A0G2JS52 829 aa13.68□□□□□ -0.22
LINC01216-201ENST00000515728 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
LINC01216-201ENST00000515728 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
LINC01216-201ENST00000515728 BCAMP50895 628 aa13.67□□□□□ -0.22
LINC01216-201ENST00000515728 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
LINC01216-201ENST00000515728 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
LINC01216-201ENST00000515728 SEPT9Q9UHD8 586 aaPredicted RBP13.65□□□□□ -0.22
LINC01216-201ENST00000515728 TSR3Q9UJK0 312 aaKnown RBP13.64□□□□□ -0.23
LINC01216-201ENST00000515728 ITGBL1O95965 494 aaPredicted RBP13.63□□□□□ -0.23
LINC01216-201ENST00000515728 HDGFP51858 240 aaKnown RBP13.63□□□□□ -0.23
LINC01216-201ENST00000515728 ARIH1Q9Y4X5 557 aaPredicted RBP13.63□□□□□ -0.23
LINC01216-201ENST00000515728 KCNC4Q03721 635 aa13.61□□□□□ -0.23
LINC01216-201ENST00000515728 IRX2Q9BZI1 471 aaPredicted RBP13.6□□□□□ -0.23
LINC01216-201ENST00000515728 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
LINC01216-201ENST00000515728 WBP1LQ9NX94 342 aa13.59□□□□□ -0.23
LINC01216-201ENST00000515728 PPP4CP60510 307 aa13.58□□□□□ -0.24
LINC01216-201ENST00000515728 HPS5Q9UPZ3 1129 aa13.58□□□□□ -0.24
LINC01216-201ENST00000515728 PRSS12P56730 875 aa13.57□□□□□ -0.24
LINC01216-201ENST00000515728 TSR1Q2NL82 804 aaKnown RBP13.56□□□□□ -0.24
LINC01216-201ENST00000515728 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
LINC01216-201ENST00000515728 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
LINC01216-201ENST00000515728 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
LINC01216-201ENST00000515728 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
LINC01216-201ENST00000515728 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
LINC01216-201ENST00000515728 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
LINC01216-201ENST00000515728 TATDN2Q93075 761 aa13.49□□□□□ -0.25
LINC01216-201ENST00000515728 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
LINC01216-201ENST00000515728 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
LINC01216-201ENST00000515728 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
LINC01216-201ENST00000515728 OSBPP22059 807 aa13.43□□□□□ -0.26
LINC01216-201ENST00000515728 SMAPO00193 183 aa13.42□□□□□ -0.26
LINC01216-201ENST00000515728 NUDT18Q6ZVK8 323 aa13.4□□□□□ -0.26
LINC01216-201ENST00000515728 RNF40O75150 1001 aa13.39□□□□□ -0.27
LINC01216-201ENST00000515728 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
LINC01216-201ENST00000515728 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
LINC01216-201ENST00000515728 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
LINC01216-201ENST00000515728 SLF2Q8IX21 1173 aa13.37□□□□□ -0.27
LINC01216-201ENST00000515728 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
LINC01216-201ENST00000515728 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
LINC01216-201ENST00000515728 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
LINC01216-201ENST00000515728 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
LINC01216-201ENST00000515728 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
LINC01216-201ENST00000515728 GGCXP38435 758 aa13.31□□□□□ -0.28
LINC01216-201ENST00000515728 MTRQ99707 1265 aa13.31□□□□□ -0.28
LINC01216-201ENST00000515728 PADI6Q6TGC4 694 aa13.3□□□□□ -0.28
LINC01216-201ENST00000515728 Q6ZNB5 142 aa13.3□□□□□ -0.28
LINC01216-201ENST00000515728 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
LINC01216-201ENST00000515728 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
LINC01216-201ENST00000515728 NPDC1Q9NQX5 325 aaPredicted RBP13.26□□□□□ -0.29
LINC01216-201ENST00000515728 SWT1Q5T5J6 900 aaKnown RBP13.25□□□□□ -0.29
LINC01216-201ENST00000515728 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
LINC01216-201ENST00000515728 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.23□□□□□ -0.29
LINC01216-201ENST00000515728 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
LINC01216-201ENST00000515728 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
LINC01216-201ENST00000515728 PRKD2Q9BZL6 878 aa13.22□□□□□ -0.29
LINC01216-201ENST00000515728 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
LINC01216-201ENST00000515728 APLP1P51693 650 aa13.21□□□□□ -0.29
LINC01216-201ENST00000515728 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
LINC01216-201ENST00000515728 GFRA3O60609 400 aa13.2□□□□□ -0.3
LINC01216-201ENST00000515728 EYA1Q99502 592 aa13.2□□□□□ -0.3
LINC01216-201ENST00000515728 DNAJB2P25686 324 aa13.19□□□□□ -0.3
LINC01216-201ENST00000515728 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
LINC01216-201ENST00000515728 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
LINC01216-201ENST00000515728 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
LINC01216-201ENST00000515728 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
LINC01216-201ENST00000515728 PTGDRQ13258 359 aa13.16□□□□□ -0.3
LINC01216-201ENST00000515728 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
LINC01216-201ENST00000515728 PCDHB3Q9Y5E6 796 aa13.16□□□□□ -0.3
LINC01216-201ENST00000515728 COPS2P61201 443 aa13.15□□□□□ -0.3
LINC01216-201ENST00000515728 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
LINC01216-201ENST00000515728 RSPH4AQ5TD94 716 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms