RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 LMTK3Q96Q04 1460 aa20.33■□□□□ 0.85
ABCC3-216ENST00000515585 DIP2CQ9Y2E4 1556 aa20.3■□□□□ 0.84
ABCC3-216ENST00000515585 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
ABCC3-216ENST00000515585 VWDEQ8N2E2 1590 aa20.29■□□□□ 0.84
ABCC3-216ENST00000515585 RNF17Q9BXT8 1623 aaKnown RBP20.29■□□□□ 0.84
ABCC3-216ENST00000515585 MPHOSPH9Q99550 1183 aa20.28■□□□□ 0.84
ABCC3-216ENST00000515585 FAM135AQ9P2D6 1515 aa20.27■□□□□ 0.84
ABCC3-216ENST00000515585 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.84
ABCC3-216ENST00000515585 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.83
ABCC3-216ENST00000515585 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
ABCC3-216ENST00000515585 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
ABCC3-216ENST00000515585 A2MP01023 1474 aa20.24■□□□□ 0.83
ABCC3-216ENST00000515585 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
ABCC3-216ENST00000515585 NUP155O75694 1391 aa20.21■□□□□ 0.83
ABCC3-216ENST00000515585 PTPRMP28827 1452 aa20.21■□□□□ 0.83
ABCC3-216ENST00000515585 SOCS7O14512 581 aa20.2■□□□□ 0.82
ABCC3-216ENST00000515585 RAPGEF3O95398 923 aa20.2■□□□□ 0.82
ABCC3-216ENST00000515585 TET3O43151 1660 aa20.19■□□□□ 0.82
ABCC3-216ENST00000515585 ILDR2Q71H61 639 aa20.19■□□□□ 0.82
ABCC3-216ENST00000515585 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
ABCC3-216ENST00000515585 SIN3AQ96ST3 1273 aa20.17■□□□□ 0.82
ABCC3-216ENST00000515585 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
ABCC3-216ENST00000515585 YEATS2Q9ULM3 1422 aa20.17■□□□□ 0.82
ABCC3-216ENST00000515585 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
ABCC3-216ENST00000515585 E9PCH4 1651 aa20.16■□□□□ 0.82
ABCC3-216ENST00000515585 RPRD2Q5VT52 1461 aaKnown RBP20.16■□□□□ 0.82
ABCC3-216ENST00000515585 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
ABCC3-216ENST00000515585 ATP10AO60312 1499 aa20.15■□□□□ 0.82
ABCC3-216ENST00000515585 CERKQ8TCT0 537 aa20.13■□□□□ 0.81
ABCC3-216ENST00000515585 AGLP35573 1532 aa20.12■□□□□ 0.81
ABCC3-216ENST00000515585 CEP152O94986 1710 aa20.12■□□□□ 0.81
ABCC3-216ENST00000515585 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
ABCC3-216ENST00000515585 DISP3Q9P2K9 1392 aa20.11■□□□□ 0.81
ABCC3-216ENST00000515585 PKD2Q13563 968 aa20.11■□□□□ 0.81
ABCC3-216ENST00000515585 PLA2R1Q13018 1463 aa20.1■□□□□ 0.81
ABCC3-216ENST00000515585 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
ABCC3-216ENST00000515585 EFCAB6Q5THR3 1501 aa20.09■□□□□ 0.81
ABCC3-216ENST00000515585 SPHKAPQ2M3C7 1700 aa20.09■□□□□ 0.81
ABCC3-216ENST00000515585 HSPA2P54652 639 aa20.08■□□□□ 0.81
ABCC3-216ENST00000515585 FOXD1Q16676 465 aa20.08■□□□□ 0.81
ABCC3-216ENST00000515585 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
ABCC3-216ENST00000515585 KIF3BO15066 747 aa20.06■□□□□ 0.8
ABCC3-216ENST00000515585 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
ABCC3-216ENST00000515585 PTPRTO14522 1441 aa20.05■□□□□ 0.8
ABCC3-216ENST00000515585 ABCC3O15438 1527 aa20.05■□□□□ 0.8
ABCC3-216ENST00000515585 TRPM2O94759 1503 aa20.04■□□□□ 0.8
ABCC3-216ENST00000515585 CAMSAP1Q5T5Y3 1602 aa20.04■□□□□ 0.8
ABCC3-216ENST00000515585 KANK1Q14678 1352 aa20.03■□□□□ 0.8
ABCC3-216ENST00000515585 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
ABCC3-216ENST00000515585 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
ABCC3-216ENST00000515585 NEURL4Q96JN8 1562 aa20■□□□□ 0.79
ABCC3-216ENST00000515585 TONSLQ96HA7 1378 aa20■□□□□ 0.79
ABCC3-216ENST00000515585 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
ABCC3-216ENST00000515585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.79
ABCC3-216ENST00000515585 ARHGAP31Q2M1Z3 1444 aa19.97■□□□□ 0.79
ABCC3-216ENST00000515585 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
ABCC3-216ENST00000515585 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
ABCC3-216ENST00000515585 NPATQ14207 1427 aa19.93■□□□□ 0.78
ABCC3-216ENST00000515585 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
ABCC3-216ENST00000515585 PIK3C2BO00750 1634 aa19.92■□□□□ 0.78
ABCC3-216ENST00000515585 MADDQ8WXG6 1647 aa19.92■□□□□ 0.78
ABCC3-216ENST00000515585 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
ABCC3-216ENST00000515585 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
ABCC3-216ENST00000515585 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
ABCC3-216ENST00000515585 NOS1P29475 1434 aa19.9■□□□□ 0.78
ABCC3-216ENST00000515585 UHRF1BP1Q6BDS2 1440 aa19.9■□□□□ 0.78
ABCC3-216ENST00000515585 KIF1BO60333 1816 aa19.89■□□□□ 0.77
ABCC3-216ENST00000515585 PREX1Q8TCU6 1659 aa19.89■□□□□ 0.77
ABCC3-216ENST00000515585 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
ABCC3-216ENST00000515585 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
ABCC3-216ENST00000515585 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
ABCC3-216ENST00000515585 IFT172Q9UG01 1749 aa19.88■□□□□ 0.77
ABCC3-216ENST00000515585 SYNMO15061 1565 aa19.87■□□□□ 0.77
ABCC3-216ENST00000515585 GGT6Q6P531 493 aa19.87■□□□□ 0.77
ABCC3-216ENST00000515585 MROH2AA6NES4 1674 aa19.85■□□□□ 0.77
ABCC3-216ENST00000515585 UGGT1Q9NYU2 1555 aa19.84■□□□□ 0.77
ABCC3-216ENST00000515585 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.77
ABCC3-216ENST00000515585 ADGRB3O60242 1522 aa19.83■□□□□ 0.77
ABCC3-216ENST00000515585 SPATA31D1Q6ZQQ2 1576 aa19.8■□□□□ 0.76
ABCC3-216ENST00000515585 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
ABCC3-216ENST00000515585 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
ABCC3-216ENST00000515585 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
ABCC3-216ENST00000515585 TRPM1Q7Z4N2 1603 aa19.8■□□□□ 0.76
ABCC3-216ENST00000515585 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
ABCC3-216ENST00000515585 MLECQ14165 292 aa19.79■□□□□ 0.76
ABCC3-216ENST00000515585 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
ABCC3-216ENST00000515585 ERVK-7P63135 1459 aa19.78■□□□□ 0.76
ABCC3-216ENST00000515585 PPLO60437 1756 aa19.77■□□□□ 0.76
ABCC3-216ENST00000515585 LAMC1P11047 1609 aa19.76■□□□□ 0.75
ABCC3-216ENST00000515585 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
ABCC3-216ENST00000515585 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
ABCC3-216ENST00000515585 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
ABCC3-216ENST00000515585 MYOM2P54296 1465 aa19.73■□□□□ 0.75
ABCC3-216ENST00000515585 FER1L4A9Z1Z3 1794 aa19.73■□□□□ 0.75
ABCC3-216ENST00000515585 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
ABCC3-216ENST00000515585 NRXN1Q9ULB1 1477 aa19.72■□□□□ 0.75
ABCC3-216ENST00000515585 STAC3Q96MF2 364 aa19.71■□□□□ 0.75
ABCC3-216ENST00000515585 KDM5AP29375 1690 aaKnown RBP19.69■□□□□ 0.74
ABCC3-216ENST00000515585 POLR1AO95602 1720 aaPredicted RBP19.69■□□□□ 0.74
ABCC3-216ENST00000515585 CEBPAP49715 358 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms