RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
TRIO-222ENST00000515144 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
TRIO-222ENST00000515144 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
TRIO-222ENST00000515144 MCCP23508 829 aa18.22■□□□□ 0.51
TRIO-222ENST00000515144 L3MBTL2Q969R5 705 aa18.22■□□□□ 0.51
TRIO-222ENST00000515144 RAD21O60216 631 aa18.21■□□□□ 0.51
TRIO-222ENST00000515144 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
TRIO-222ENST00000515144 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
TRIO-222ENST00000515144 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
TRIO-222ENST00000515144 VPS53Q5VIR6 699 aa18.2■□□□□ 0.5
TRIO-222ENST00000515144 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
TRIO-222ENST00000515144 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
TRIO-222ENST00000515144 COG3Q96JB2 828 aa18.2■□□□□ 0.5
TRIO-222ENST00000515144 IPO8O15397 1037 aaKnown RBP18.2■□□□□ 0.5
TRIO-222ENST00000515144 NESP48681 1621 aa18.2■□□□□ 0.5
TRIO-222ENST00000515144 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
TRIO-222ENST00000515144 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
TRIO-222ENST00000515144 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
TRIO-222ENST00000515144 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
TRIO-222ENST00000515144 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
TRIO-222ENST00000515144 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
TRIO-222ENST00000515144 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
TRIO-222ENST00000515144 HSCBQ8IWL3 235 aa18.16■□□□□ 0.5
TRIO-222ENST00000515144 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
TRIO-222ENST00000515144 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.5
TRIO-222ENST00000515144 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
TRIO-222ENST00000515144 PANK3Q9H999 370 aa18.14■□□□□ 0.49
TRIO-222ENST00000515144 VGFO15240 615 aaPredicted RBP18.14■□□□□ 0.49
TRIO-222ENST00000515144 PDE4CQ08493 712 aa18.14■□□□□ 0.49
TRIO-222ENST00000515144 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
TRIO-222ENST00000515144 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
TRIO-222ENST00000515144 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
TRIO-222ENST00000515144 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
TRIO-222ENST00000515144 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
TRIO-222ENST00000515144 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
TRIO-222ENST00000515144 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
TRIO-222ENST00000515144 DRC7Q8IY82 874 aa18.11■□□□□ 0.49
TRIO-222ENST00000515144 TEFQ10587 303 aa18.11■□□□□ 0.49
TRIO-222ENST00000515144 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
TRIO-222ENST00000515144 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
TRIO-222ENST00000515144 CREBRFQ8IUR6 639 aa18.1■□□□□ 0.49
TRIO-222ENST00000515144 STRN4Q9NRL3 753 aa18.1■□□□□ 0.49
TRIO-222ENST00000515144 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
TRIO-222ENST00000515144 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.49
TRIO-222ENST00000515144 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
TRIO-222ENST00000515144 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
TRIO-222ENST00000515144 FAM177BA6PVY3 158 aa18.06■□□□□ 0.48
TRIO-222ENST00000515144 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
TRIO-222ENST00000515144 RALBP1Q15311 655 aa18.06■□□□□ 0.48
TRIO-222ENST00000515144 HMOX1P09601 288 aa18.06■□□□□ 0.48
TRIO-222ENST00000515144 PMFBP1Q8TBY8 1022 aa18.06■□□□□ 0.48
TRIO-222ENST00000515144 PRM3Q9NNZ6 103 aa18.05■□□□□ 0.48
TRIO-222ENST00000515144 VPS37DQ86XT2 251 aa18.05■□□□□ 0.48
TRIO-222ENST00000515144 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
TRIO-222ENST00000515144 MFAP1P55081 439 aaKnown RBP18.04■□□□□ 0.48
TRIO-222ENST00000515144 TRIM34Q9BYJ4 488 aa18.04■□□□□ 0.48
TRIO-222ENST00000515144 GOLGA6L6A8MZA4 724 aa18.04■□□□□ 0.48
TRIO-222ENST00000515144 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
TRIO-222ENST00000515144 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
TRIO-222ENST00000515144 FOXD4L5Q5VV16 416 aaPredicted RBP18.03■□□□□ 0.48
TRIO-222ENST00000515144 RASSF8Q8NHQ8 419 aa18.03■□□□□ 0.48
TRIO-222ENST00000515144 FOXD4L4Q8WXT5 416 aaPredicted RBP18.03■□□□□ 0.48
TRIO-222ENST00000515144 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
TRIO-222ENST00000515144 RTN4Q9NQC3 1192 aaKnown RBP18.02■□□□□ 0.47
TRIO-222ENST00000515144 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
TRIO-222ENST00000515144 AIMP1Q12904 312 aaKnown RBP18.01■□□□□ 0.47
TRIO-222ENST00000515144 NLRP2Q9NX02 1062 aa18.01■□□□□ 0.47
TRIO-222ENST00000515144 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
TRIO-222ENST00000515144 C9orf78Q9NZ63 289 aaPredicted RBP18■□□□□ 0.47
TRIO-222ENST00000515144 ABTB2Q8N961 1025 aa18■□□□□ 0.47
TRIO-222ENST00000515144 MARCH6O60337 910 aa18■□□□□ 0.47
TRIO-222ENST00000515144 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
TRIO-222ENST00000515144 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
TRIO-222ENST00000515144 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
TRIO-222ENST00000515144 PLIN1O60240 522 aa17.98■□□□□ 0.47
TRIO-222ENST00000515144 PROSER2Q86WR7 435 aaPredicted RBP17.98■□□□□ 0.47
TRIO-222ENST00000515144 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
TRIO-222ENST00000515144 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
TRIO-222ENST00000515144 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
TRIO-222ENST00000515144 GZF1Q9H116 711 aaPredicted RBP17.97■□□□□ 0.47
TRIO-222ENST00000515144 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
TRIO-222ENST00000515144 HMMRO75330 724 aa17.96■□□□□ 0.47
TRIO-222ENST00000515144 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRIO-222ENST00000515144 FOXD4L6Q3SYB3 417 aaPredicted RBP17.96■□□□□ 0.46
TRIO-222ENST00000515144 FOXD4L3Q6VB84 417 aaPredicted RBP17.96■□□□□ 0.46
TRIO-222ENST00000515144 CWC22Q9HCG8 908 aaKnown RBP17.96■□□□□ 0.46
TRIO-222ENST00000515144 FYB1O15117 783 aa17.95■□□□□ 0.46
TRIO-222ENST00000515144 XPCQ01831 940 aaPredicted RBP17.95■□□□□ 0.46
TRIO-222ENST00000515144 SLKQ9H2G2 1235 aaPredicted RBP17.95■□□□□ 0.46
TRIO-222ENST00000515144 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
TRIO-222ENST00000515144 RAPGEF4Q8WZA2 1011 aa17.95■□□□□ 0.46
TRIO-222ENST00000515144 APPP05067 770 aa17.95■□□□□ 0.46
TRIO-222ENST00000515144 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
TRIO-222ENST00000515144 RAPGEF3O95398 923 aa17.94■□□□□ 0.46
TRIO-222ENST00000515144 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
TRIO-222ENST00000515144 NOL10Q9BSC4 688 aaKnown RBP17.94■□□□□ 0.46
TRIO-222ENST00000515144 NEXNQ0ZGT2 675 aa17.94■□□□□ 0.46
TRIO-222ENST00000515144 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
TRIO-222ENST00000515144 NLRP6P59044 892 aa17.93■□□□□ 0.46
TRIO-222ENST00000515144 ANKRD45Q5TZF3 282 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms