RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDHBP3-201ENST00000514909 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
LDHBP3-201ENST00000514909 FECHP22830 423 aa14.28□□□□□ -0.12
LDHBP3-201ENST00000514909 PTGDRQ13258 359 aa14.28□□□□□ -0.12
LDHBP3-201ENST00000514909 POTEB3A0JP26 581 aa14.27□□□□□ -0.13
LDHBP3-201ENST00000514909 POTEBQ6S5H4 581 aa14.27□□□□□ -0.13
LDHBP3-201ENST00000514909 DDX12PQ92771 950 aa14.27□□□□□ -0.13
LDHBP3-201ENST00000514909 TTLL12Q14166 644 aaPredicted RBP14.26□□□□□ -0.13
LDHBP3-201ENST00000514909 ONECUT3O60422 494 aaPredicted RBP14.25□□□□□ -0.13
LDHBP3-201ENST00000514909 HOXB3P14651 431 aaPredicted RBP14.25□□□□□ -0.13
LDHBP3-201ENST00000514909 EMP3P54852 163 aa14.25□□□□□ -0.13
LDHBP3-201ENST00000514909 SPNS2Q8IVW8 549 aa14.25□□□□□ -0.13
LDHBP3-201ENST00000514909 EVI5O60447 810 aa14.23□□□□□ -0.13
LDHBP3-201ENST00000514909 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
LDHBP3-201ENST00000514909 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
LDHBP3-201ENST00000514909 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
LDHBP3-201ENST00000514909 MMRN1Q13201 1228 aa14.21□□□□□ -0.13
LDHBP3-201ENST00000514909 C1orf115Q9H7X2 142 aa14.2□□□□□ -0.14
LDHBP3-201ENST00000514909 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
LDHBP3-201ENST00000514909 PCMTD1Q96MG8 357 aaPredicted RBP14.19□□□□□ -0.14
LDHBP3-201ENST00000514909 HS3ST6Q96QI5 342 aa14.19□□□□□ -0.14
LDHBP3-201ENST00000514909 MS4A1P11836 297 aa14.18□□□□□ -0.14
LDHBP3-201ENST00000514909 A6NJR5 290 aa14.17□□□□□ -0.14
LDHBP3-201ENST00000514909 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
LDHBP3-201ENST00000514909 KRTAP3-2Q9BYR7 98 aa14.17□□□□□ -0.14
LDHBP3-201ENST00000514909 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
LDHBP3-201ENST00000514909 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
LDHBP3-201ENST00000514909 SH3D19Q5HYK7 790 aa14.16□□□□□ -0.14
LDHBP3-201ENST00000514909 TMUB1Q9BVT8 246 aa14.16□□□□□ -0.14
LDHBP3-201ENST00000514909 EPAS1Q99814 870 aa14.14□□□□□ -0.15
LDHBP3-201ENST00000514909 PODXL2Q9NZ53 605 aa14.14□□□□□ -0.15
LDHBP3-201ENST00000514909 SLC34A2O95436 690 aa14.13□□□□□ -0.15
LDHBP3-201ENST00000514909 CLCN1P35523 988 aa14.13□□□□□ -0.15
LDHBP3-201ENST00000514909 EN1Q05925 392 aaPredicted RBP14.13□□□□□ -0.15
LDHBP3-201ENST00000514909 REPIN1Q9BWE0 567 aaKnown RBP14.12□□□□□ -0.15
LDHBP3-201ENST00000514909 PHF14O94880 888 aa14.11□□□□□ -0.15
LDHBP3-201ENST00000514909 NPDC1Q9NQX5 325 aaPredicted RBP14.11□□□□□ -0.15
LDHBP3-201ENST00000514909 HOXB1P14653 301 aaPredicted RBP14.1□□□□□ -0.15
LDHBP3-201ENST00000514909 APBB1O00213 710 aa14.09□□□□□ -0.15
LDHBP3-201ENST00000514909 GPCPD1Q9NPB8 672 aa14.09□□□□□ -0.15
LDHBP3-201ENST00000514909 ARID3AQ99856 593 aa14.07□□□□□ -0.16
LDHBP3-201ENST00000514909 CDHR5Q9HBB8 845 aa14.07□□□□□ -0.16
LDHBP3-201ENST00000514909 MCM6Q14566 821 aa14.06□□□□□ -0.16
LDHBP3-201ENST00000514909 DOK7Q18PE1 504 aa14.06□□□□□ -0.16
LDHBP3-201ENST00000514909 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
LDHBP3-201ENST00000514909 SKIV2LQ15477 1246 aaKnown RBP14.05□□□□□ -0.16
LDHBP3-201ENST00000514909 TRAK2O60296 914 aa14.04□□□□□ -0.16
LDHBP3-201ENST00000514909 ZNF710Q8N1W2 664 aa14.04□□□□□ -0.16
LDHBP3-201ENST00000514909 MAP3K7O43318 606 aa14.02□□□□□ -0.17
LDHBP3-201ENST00000514909 MDM2Q00987 491 aaPredicted RBP14.01□□□□□ -0.17
LDHBP3-201ENST00000514909 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
LDHBP3-201ENST00000514909 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
LDHBP3-201ENST00000514909 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
LDHBP3-201ENST00000514909 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
LDHBP3-201ENST00000514909 PHOX2BQ99453 314 aa13.99□□□□□ -0.17
LDHBP3-201ENST00000514909 FBXW7Q969H0 707 aa13.98□□□□□ -0.17
LDHBP3-201ENST00000514909 PCDHGA10Q9Y5H3 936 aa13.98□□□□□ -0.17
LDHBP3-201ENST00000514909 FAM217BQ9NTX9 383 aaPredicted RBP13.97□□□□□ -0.17
LDHBP3-201ENST00000514909 OATP04181 439 aa13.96□□□□□ -0.17
LDHBP3-201ENST00000514909 CERKQ8TCT0 537 aa13.96□□□□□ -0.17
LDHBP3-201ENST00000514909 ERBB3P21860 1342 aa13.95□□□□□ -0.18
LDHBP3-201ENST00000514909 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
LDHBP3-201ENST00000514909 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
LDHBP3-201ENST00000514909 GPR153Q6NV75 609 aa13.94□□□□□ -0.18
LDHBP3-201ENST00000514909 METTL3Q86U44 580 aaKnown RBP13.94□□□□□ -0.18
LDHBP3-201ENST00000514909 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
LDHBP3-201ENST00000514909 TSR1Q2NL82 804 aaKnown RBP13.93□□□□□ -0.18
LDHBP3-201ENST00000514909 CCDC82Q8N4S0 544 aa13.93□□□□□ -0.18
LDHBP3-201ENST00000514909 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
LDHBP3-201ENST00000514909 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
LDHBP3-201ENST00000514909 RBM33Q96EV2 1170 aaKnown RBP13.92□□□□□ -0.18
LDHBP3-201ENST00000514909 RBM27Q9P2N5 1060 aaKnown RBP13.92□□□□□ -0.18
LDHBP3-201ENST00000514909 HRCP23327 699 aa13.91□□□□□ -0.18
LDHBP3-201ENST00000514909 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
LDHBP3-201ENST00000514909 VARS2Q5ST30 1063 aaKnown RBP13.9□□□□□ -0.18
LDHBP3-201ENST00000514909 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
LDHBP3-201ENST00000514909 PXYLP1Q8TE99 480 aa13.89□□□□□ -0.19
LDHBP3-201ENST00000514909 PCDHGA4Q9Y5G9 962 aa13.89□□□□□ -0.19
LDHBP3-201ENST00000514909 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
LDHBP3-201ENST00000514909 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
LDHBP3-201ENST00000514909 ADGRG1Q9Y653 693 aa13.88□□□□□ -0.19
LDHBP3-201ENST00000514909 RAD21O60216 631 aa13.87□□□□□ -0.19
LDHBP3-201ENST00000514909 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
LDHBP3-201ENST00000514909 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
LDHBP3-201ENST00000514909 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
LDHBP3-201ENST00000514909 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
LDHBP3-201ENST00000514909 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
LDHBP3-201ENST00000514909 PDIA4P13667 645 aaKnown RBP13.85□□□□□ -0.19
LDHBP3-201ENST00000514909 PADI6Q6TGC4 694 aa13.85□□□□□ -0.19
LDHBP3-201ENST00000514909 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
LDHBP3-201ENST00000514909 FOSBP53539 338 aa13.84□□□□□ -0.19
LDHBP3-201ENST00000514909 POLR3EQ9NVU0 708 aa13.83□□□□□ -0.2
LDHBP3-201ENST00000514909 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
LDHBP3-201ENST00000514909 C6orf132Q5T0Z8 1188 aa13.81□□□□□ -0.2
LDHBP3-201ENST00000514909 ZNF687Q8N1G0 1237 aa13.81□□□□□ -0.2
LDHBP3-201ENST00000514909 POM121Q96HA1 1249 aa13.81□□□□□ -0.2
LDHBP3-201ENST00000514909 SERPINA10Q9UK55 444 aa13.81□□□□□ -0.2
LDHBP3-201ENST00000514909 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
LDHBP3-201ENST00000514909 TBC1D2Q9BYX2 928 aa13.79□□□□□ -0.2
LDHBP3-201ENST00000514909 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms