RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 DPYSL4O14531 572 aa11.84□□□□□ -0.51
SNX2-212ENST00000514030 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
SNX2-212ENST00000514030 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
SNX2-212ENST00000514030 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
SNX2-212ENST00000514030 COL9A1P20849 921 aa11.8□□□□□ -0.52
SNX2-212ENST00000514030 LAPTM4BQ86VI4 370 aa11.79□□□□□ -0.52
SNX2-212ENST00000514030 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
SNX2-212ENST00000514030 SPRYD3Q8NCJ5 442 aa11.78□□□□□ -0.52
SNX2-212ENST00000514030 C6orf132Q5T0Z8 1188 aa11.77□□□□□ -0.53
SNX2-212ENST00000514030 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
SNX2-212ENST00000514030 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
SNX2-212ENST00000514030 DDX12PQ92771 950 aa11.74□□□□□ -0.53
SNX2-212ENST00000514030 RBM33Q96EV2 1170 aaKnown RBP11.74□□□□□ -0.53
SNX2-212ENST00000514030 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
SNX2-212ENST00000514030 RGS20O76081 388 aa11.73□□□□□ -0.53
SNX2-212ENST00000514030 NBR1Q14596 966 aa11.72□□□□□ -0.53
SNX2-212ENST00000514030 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
SNX2-212ENST00000514030 PDIA6Q15084 440 aa11.71□□□□□ -0.53
SNX2-212ENST00000514030 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
SNX2-212ENST00000514030 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
SNX2-212ENST00000514030 SOWAHBA6NEL2 793 aa11.7□□□□□ -0.54
SNX2-212ENST00000514030 SPDYE16A6NNV3 312 aaPredicted RBP11.7□□□□□ -0.54
SNX2-212ENST00000514030 BCAMP50895 628 aa11.7□□□□□ -0.54
SNX2-212ENST00000514030 A0A0G2JS52 829 aa11.69□□□□□ -0.54
SNX2-212ENST00000514030 MAP3K7O43318 606 aa11.69□□□□□ -0.54
SNX2-212ENST00000514030 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
SNX2-212ENST00000514030 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
SNX2-212ENST00000514030 SEPT9Q9UHD8 586 aaPredicted RBP11.69□□□□□ -0.54
SNX2-212ENST00000514030 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
SNX2-212ENST00000514030 E2F4Q16254 413 aa11.66□□□□□ -0.54
SNX2-212ENST00000514030 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
SNX2-212ENST00000514030 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
SNX2-212ENST00000514030 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
SNX2-212ENST00000514030 LRCH3Q96II8 777 aa11.64□□□□□ -0.55
SNX2-212ENST00000514030 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
SNX2-212ENST00000514030 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
SNX2-212ENST00000514030 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
SNX2-212ENST00000514030 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
SNX2-212ENST00000514030 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
SNX2-212ENST00000514030 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
SNX2-212ENST00000514030 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
SNX2-212ENST00000514030 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
SNX2-212ENST00000514030 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.56
SNX2-212ENST00000514030 GRXCR2A6NFK2 248 aa11.57□□□□□ -0.56
SNX2-212ENST00000514030 KCNC4Q03721 635 aa11.57□□□□□ -0.56
SNX2-212ENST00000514030 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
SNX2-212ENST00000514030 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
SNX2-212ENST00000514030 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
SNX2-212ENST00000514030 PRSS12P56730 875 aa11.55□□□□□ -0.56
SNX2-212ENST00000514030 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
SNX2-212ENST00000514030 PPP4CP60510 307 aa11.53□□□□□ -0.56
SNX2-212ENST00000514030 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
SNX2-212ENST00000514030 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
SNX2-212ENST00000514030 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
SNX2-212ENST00000514030 SMAPO00193 183 aa11.48□□□□□ -0.57
SNX2-212ENST00000514030 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
SNX2-212ENST00000514030 TATDN2Q93075 761 aa11.47□□□□□ -0.57
SNX2-212ENST00000514030 RNF40O75150 1001 aa11.45□□□□□ -0.58
SNX2-212ENST00000514030 OSBPP22059 807 aa11.45□□□□□ -0.58
SNX2-212ENST00000514030 CDHR5Q9HBB8 845 aa11.45□□□□□ -0.58
SNX2-212ENST00000514030 PRIM1P49642 420 aaKnown RBP11.44□□□□□ -0.58
SNX2-212ENST00000514030 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
SNX2-212ENST00000514030 FAM198AQ9UFP1 575 aa11.43□□□□□ -0.58
SNX2-212ENST00000514030 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
SNX2-212ENST00000514030 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
SNX2-212ENST00000514030 IL21Q9HBE4 155 aa11.38□□□□□ -0.59
SNX2-212ENST00000514030 PADI6Q6TGC4 694 aa11.37□□□□□ -0.59
SNX2-212ENST00000514030 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
SNX2-212ENST00000514030 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
SNX2-212ENST00000514030 MTRQ99707 1265 aa11.36□□□□□ -0.59
SNX2-212ENST00000514030 C3orf80F5H4A9 247 aa11.35□□□□□ -0.59
SNX2-212ENST00000514030 Q6ZNB5 142 aa11.35□□□□□ -0.59
SNX2-212ENST00000514030 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
SNX2-212ENST00000514030 LAPTM4AQ15012 233 aa11.34□□□□□ -0.59
SNX2-212ENST00000514030 TTC13Q8NBP0 860 aa11.32□□□□□ -0.6
SNX2-212ENST00000514030 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
SNX2-212ENST00000514030 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
SNX2-212ENST00000514030 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
SNX2-212ENST00000514030 APLP1P51693 650 aa11.29□□□□□ -0.6
SNX2-212ENST00000514030 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
SNX2-212ENST00000514030 GGCXP38435 758 aa11.27□□□□□ -0.61
SNX2-212ENST00000514030 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
SNX2-212ENST00000514030 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
SNX2-212ENST00000514030 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
SNX2-212ENST00000514030 TSHZ2Q9NRE2 1034 aa11.27□□□□□ -0.61
SNX2-212ENST00000514030 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
SNX2-212ENST00000514030 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
SNX2-212ENST00000514030 COPS2P61201 443 aa11.24□□□□□ -0.61
SNX2-212ENST00000514030 ZNF516Q92618 1163 aa11.24□□□□□ -0.61
SNX2-212ENST00000514030 EYA1Q99502 592 aa11.24□□□□□ -0.61
SNX2-212ENST00000514030 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
SNX2-212ENST00000514030 GFRA3O60609 400 aa11.23□□□□□ -0.61
SNX2-212ENST00000514030 DNAJB2P25686 324 aa11.23□□□□□ -0.61
SNX2-212ENST00000514030 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
SNX2-212ENST00000514030 PTGDRQ13258 359 aa11.22□□□□□ -0.61
SNX2-212ENST00000514030 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
SNX2-212ENST00000514030 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
SNX2-212ENST00000514030 ZPR1O75312 459 aa11.18□□□□□ -0.62
SNX2-212ENST00000514030 NRG2O14511 850 aaPredicted RBP11.17□□□□□ -0.62
SNX2-212ENST00000514030 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms