RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 MFAP1P55081 439 aaKnown RBP9.63□□□□□ -0.87
CHD1-208ENST00000512392 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
CHD1-208ENST00000512392 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
CHD1-208ENST00000512392 TMCO4Q5TGY1 634 aa9.62□□□□□ -0.87
CHD1-208ENST00000512392 ZMYND10O75800 440 aa9.61□□□□□ -0.87
CHD1-208ENST00000512392 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
CHD1-208ENST00000512392 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
CHD1-208ENST00000512392 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
CHD1-208ENST00000512392 BRD2P25440 801 aaKnown RBP9.59□□□□□ -0.87
CHD1-208ENST00000512392 PDIA6Q15084 440 aa9.59□□□□□ -0.87
CHD1-208ENST00000512392 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
CHD1-208ENST00000512392 EVI5O60447 810 aa9.56□□□□□ -0.88
CHD1-208ENST00000512392 USP35Q9P2H5 1018 aa9.56□□□□□ -0.88
CHD1-208ENST00000512392 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
CHD1-208ENST00000512392 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
CHD1-208ENST00000512392 UBE2Q2Q8WVN8 375 aa9.55□□□□□ -0.88
CHD1-208ENST00000512392 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
CHD1-208ENST00000512392 E9PSI1 815 aa9.55□□□□□ -0.88
CHD1-208ENST00000512392 SEMA3EO15041 775 aa9.55□□□□□ -0.88
CHD1-208ENST00000512392 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
CHD1-208ENST00000512392 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
CHD1-208ENST00000512392 KDM4FA0A1W2PPD8 638 aa9.54□□□□□ -0.88
CHD1-208ENST00000512392 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
CHD1-208ENST00000512392 PTGER2P43116 358 aa9.53□□□□□ -0.88
CHD1-208ENST00000512392 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
CHD1-208ENST00000512392 CLUAP1Q96AJ1 413 aa9.52□□□□□ -0.89
CHD1-208ENST00000512392 TRAK2O60296 914 aa9.51□□□□□ -0.89
CHD1-208ENST00000512392 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
CHD1-208ENST00000512392 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
CHD1-208ENST00000512392 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
CHD1-208ENST00000512392 KHSRPQ92945 711 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD1-208ENST00000512392 NUDT7P0C024 238 aa9.5□□□□□ -0.89
CHD1-208ENST00000512392 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
CHD1-208ENST00000512392 IRF5Q13568 498 aa9.48□□□□□ -0.89
CHD1-208ENST00000512392 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
CHD1-208ENST00000512392 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
CHD1-208ENST00000512392 ST18O60284 1047 aa9.46□□□□□ -0.89
CHD1-208ENST00000512392 DDX12PQ92771 950 aa9.46□□□□□ -0.9
CHD1-208ENST00000512392 FAM163AQ96GL9 167 aaPredicted RBP9.46□□□□□ -0.9
CHD1-208ENST00000512392 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
CHD1-208ENST00000512392 PHF14O94880 888 aa9.44□□□□□ -0.9
CHD1-208ENST00000512392 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
CHD1-208ENST00000512392 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
CHD1-208ENST00000512392 AK7Q96M32 723 aa9.44□□□□□ -0.9
CHD1-208ENST00000512392 EPAS1Q99814 870 aa9.44□□□□□ -0.9
CHD1-208ENST00000512392 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
CHD1-208ENST00000512392 LHX6Q9UPM6 363 aa9.43□□□□□ -0.9
CHD1-208ENST00000512392 PSDA5PKW4 1024 aaPredicted RBP9.43□□□□□ -0.9
CHD1-208ENST00000512392 FOSBP53539 338 aa9.43□□□□□ -0.9
CHD1-208ENST00000512392 FLIIQ13045 1269 aa9.43□□□□□ -0.9
CHD1-208ENST00000512392 A6NJR5 290 aa9.42□□□□□ -0.9
CHD1-208ENST00000512392 OSBPP22059 807 aa9.42□□□□□ -0.9
CHD1-208ENST00000512392 FAM117AQ9C073 453 aa9.42□□□□□ -0.9
CHD1-208ENST00000512392 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
CHD1-208ENST00000512392 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
CHD1-208ENST00000512392 TYW1BQ6NUM6 668 aa9.41□□□□□ -0.9
CHD1-208ENST00000512392 ZNF454Q8N9F8 522 aa9.4□□□□□ -0.9
CHD1-208ENST00000512392 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
CHD1-208ENST00000512392 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
CHD1-208ENST00000512392 EMP3P54852 163 aa9.38□□□□□ -0.91
CHD1-208ENST00000512392 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
CHD1-208ENST00000512392 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
CHD1-208ENST00000512392 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
CHD1-208ENST00000512392 ZDHHC16Q969W1 377 aa9.37□□□□□ -0.91
CHD1-208ENST00000512392 ERBB3P21860 1342 aa9.37□□□□□ -0.91
CHD1-208ENST00000512392 EN1Q05925 392 aaPredicted RBP9.36□□□□□ -0.91
CHD1-208ENST00000512392 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
CHD1-208ENST00000512392 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
CHD1-208ENST00000512392 PDE4DQ08499 809 aa9.35□□□□□ -0.91
CHD1-208ENST00000512392 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
CHD1-208ENST00000512392 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
CHD1-208ENST00000512392 CWC22Q9HCG8 908 aaKnown RBP9.34□□□□□ -0.91
CHD1-208ENST00000512392 TRIM66O15016 1216 aa9.33□□□□□ -0.92
CHD1-208ENST00000512392 PDE4CQ08493 712 aa9.33□□□□□ -0.92
CHD1-208ENST00000512392 RBM33Q96EV2 1170 aaKnown RBP9.33□□□□□ -0.92
CHD1-208ENST00000512392 MAP3K7O43318 606 aa9.33□□□□□ -0.92
CHD1-208ENST00000512392 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
CHD1-208ENST00000512392 ADAM33Q9BZ11 813 aa9.33□□□□□ -0.92
CHD1-208ENST00000512392 NUTM2FA1L443 756 aa9.32□□□□□ -0.92
CHD1-208ENST00000512392 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
CHD1-208ENST00000512392 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
CHD1-208ENST00000512392 BCL2L12Q9HB09 334 aa9.32□□□□□ -0.92
CHD1-208ENST00000512392 C6orf132Q5T0Z8 1188 aa9.31□□□□□ -0.92
CHD1-208ENST00000512392 TAF7LQ5H9L4 462 aa9.3□□□□□ -0.92
CHD1-208ENST00000512392 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
CHD1-208ENST00000512392 SERPINA10Q9UK55 444 aa9.29□□□□□ -0.92
CHD1-208ENST00000512392 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
CHD1-208ENST00000512392 HS3ST6Q96QI5 342 aa9.28□□□□□ -0.92
CHD1-208ENST00000512392 FCHSD2O94868 740 aa9.28□□□□□ -0.92
CHD1-208ENST00000512392 PTPREP23469 700 aa9.28□□□□□ -0.92
CHD1-208ENST00000512392 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
CHD1-208ENST00000512392 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
CHD1-208ENST00000512392 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
CHD1-208ENST00000512392 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
CHD1-208ENST00000512392 PTGDRQ13258 359 aa9.26□□□□□ -0.93
CHD1-208ENST00000512392 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
CHD1-208ENST00000512392 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
CHD1-208ENST00000512392 GPR37O15354 613 aa9.26□□□□□ -0.93
CHD1-208ENST00000512392 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
CHD1-208ENST00000512392 NPDC1Q9NQX5 325 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms