RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 FBXW7Q969H0 707 aa11.33□□□□□ -0.6
AC012055.1-201ENST00000511346 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
AC012055.1-201ENST00000511346 COL9A1P20849 921 aa11.29□□□□□ -0.6
AC012055.1-201ENST00000511346 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
AC012055.1-201ENST00000511346 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
AC012055.1-201ENST00000511346 DPYSL4O14531 572 aa11.27□□□□□ -0.61
AC012055.1-201ENST00000511346 EPAS1Q99814 870 aa11.27□□□□□ -0.61
AC012055.1-201ENST00000511346 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
AC012055.1-201ENST00000511346 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
AC012055.1-201ENST00000511346 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
AC012055.1-201ENST00000511346 C6orf132Q5T0Z8 1188 aa11.23□□□□□ -0.61
AC012055.1-201ENST00000511346 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
AC012055.1-201ENST00000511346 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
AC012055.1-201ENST00000511346 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
AC012055.1-201ENST00000511346 RGS20O76081 388 aa11.2□□□□□ -0.62
AC012055.1-201ENST00000511346 DDX12PQ92771 950 aa11.18□□□□□ -0.62
AC012055.1-201ENST00000511346 A0A0G2JS52 829 aa11.17□□□□□ -0.62
AC012055.1-201ENST00000511346 SOWAHBA6NEL2 793 aa11.17□□□□□ -0.62
AC012055.1-201ENST00000511346 TRIM6-TRIM34B2RNG4 842 aa11.17□□□□□ -0.62
AC012055.1-201ENST00000511346 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
AC012055.1-201ENST00000511346 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
AC012055.1-201ENST00000511346 ZFRQ96KR1 1074 aaKnown RBP11.17□□□□□ -0.62
AC012055.1-201ENST00000511346 BCAMP50895 628 aa11.16□□□□□ -0.62
AC012055.1-201ENST00000511346 PDIA6Q15084 440 aa11.14□□□□□ -0.63
AC012055.1-201ENST00000511346 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
AC012055.1-201ENST00000511346 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
AC012055.1-201ENST00000511346 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
AC012055.1-201ENST00000511346 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
AC012055.1-201ENST00000511346 ITGBL1O95965 494 aaPredicted RBP11.12□□□□□ -0.63
AC012055.1-201ENST00000511346 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
AC012055.1-201ENST00000511346 NBR1Q14596 966 aa11.11□□□□□ -0.63
AC012055.1-201ENST00000511346 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
AC012055.1-201ENST00000511346 MAP3K7O43318 606 aa11.09□□□□□ -0.63
AC012055.1-201ENST00000511346 WBP1LQ9NX94 342 aa11.09□□□□□ -0.63
AC012055.1-201ENST00000511346 E2F4Q16254 413 aa11.08□□□□□ -0.64
AC012055.1-201ENST00000511346 TSR1Q2NL82 804 aaKnown RBP11.08□□□□□ -0.64
AC012055.1-201ENST00000511346 PACS2Q86VP3 889 aa11.07□□□□□ -0.64
AC012055.1-201ENST00000511346 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.07□□□□□ -0.64
AC012055.1-201ENST00000511346 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
AC012055.1-201ENST00000511346 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
AC012055.1-201ENST00000511346 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
AC012055.1-201ENST00000511346 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
AC012055.1-201ENST00000511346 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
AC012055.1-201ENST00000511346 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
AC012055.1-201ENST00000511346 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
AC012055.1-201ENST00000511346 KCNC4Q03721 635 aa11.02□□□□□ -0.65
AC012055.1-201ENST00000511346 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
AC012055.1-201ENST00000511346 CDCA7LQ96GN5 454 aa11.01□□□□□ -0.65
AC012055.1-201ENST00000511346 PRIM1P49642 420 aaKnown RBP11□□□□□ -0.65
AC012055.1-201ENST00000511346 PRSS12P56730 875 aa11□□□□□ -0.65
AC012055.1-201ENST00000511346 GRXCR2A6NFK2 248 aa10.99□□□□□ -0.65
AC012055.1-201ENST00000511346 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
AC012055.1-201ENST00000511346 FAM198AQ9UFP1 575 aa10.98□□□□□ -0.65
AC012055.1-201ENST00000511346 SMAPO00193 183 aa10.96□□□□□ -0.65
AC012055.1-201ENST00000511346 PPP4CP60510 307 aa10.96□□□□□ -0.65
AC012055.1-201ENST00000511346 OSBPP22059 807 aa10.95□□□□□ -0.66
AC012055.1-201ENST00000511346 SAMD7Q7Z3H4 446 aa10.95□□□□□ -0.66
AC012055.1-201ENST00000511346 NBPF26B4DH59 902 aa10.94□□□□□ -0.66
AC012055.1-201ENST00000511346 TATDN2Q93075 761 aa10.94□□□□□ -0.66
AC012055.1-201ENST00000511346 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
AC012055.1-201ENST00000511346 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
AC012055.1-201ENST00000511346 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
AC012055.1-201ENST00000511346 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
AC012055.1-201ENST00000511346 RBM27Q9P2N5 1060 aaKnown RBP10.91□□□□□ -0.66
AC012055.1-201ENST00000511346 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
AC012055.1-201ENST00000511346 NUDT18Q6ZVK8 323 aa10.88□□□□□ -0.67
AC012055.1-201ENST00000511346 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
AC012055.1-201ENST00000511346 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
AC012055.1-201ENST00000511346 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
AC012055.1-201ENST00000511346 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
AC012055.1-201ENST00000511346 MTRQ99707 1265 aa10.84□□□□□ -0.67
AC012055.1-201ENST00000511346 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
AC012055.1-201ENST00000511346 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
AC012055.1-201ENST00000511346 RNF40O75150 1001 aa10.81□□□□□ -0.68
AC012055.1-201ENST00000511346 Q6ZNB5 142 aa10.8□□□□□ -0.68
AC012055.1-201ENST00000511346 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
AC012055.1-201ENST00000511346 APLP1P51693 650 aa10.79□□□□□ -0.68
AC012055.1-201ENST00000511346 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
AC012055.1-201ENST00000511346 SWT1Q5T5J6 900 aaKnown RBP10.78□□□□□ -0.68
AC012055.1-201ENST00000511346 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
AC012055.1-201ENST00000511346 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
AC012055.1-201ENST00000511346 LAPTM4AQ15012 233 aa10.77□□□□□ -0.69
AC012055.1-201ENST00000511346 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
AC012055.1-201ENST00000511346 PPP1R18Q6NYC8 613 aa10.76□□□□□ -0.69
AC012055.1-201ENST00000511346 EYA1Q99502 592 aa10.75□□□□□ -0.69
AC012055.1-201ENST00000511346 PRKD2Q9BZL6 878 aa10.75□□□□□ -0.69
AC012055.1-201ENST00000511346 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
AC012055.1-201ENST00000511346 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
AC012055.1-201ENST00000511346 GFRA3O60609 400 aa10.72□□□□□ -0.69
AC012055.1-201ENST00000511346 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
AC012055.1-201ENST00000511346 V9GY48 417 aaPredicted RBP10.72□□□□□ -0.69
AC012055.1-201ENST00000511346 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
AC012055.1-201ENST00000511346 COPS2P61201 443 aa10.69□□□□□ -0.7
AC012055.1-201ENST00000511346 PTGDRQ13258 359 aa10.69□□□□□ -0.7
AC012055.1-201ENST00000511346 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
AC012055.1-201ENST00000511346 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
AC012055.1-201ENST00000511346 PRR14Q9BWN1 585 aa10.68□□□□□ -0.7
AC012055.1-201ENST00000511346 ZPR1O75312 459 aa10.66□□□□□ -0.7
AC012055.1-201ENST00000511346 DNAJB2P25686 324 aa10.66□□□□□ -0.7
AC012055.1-201ENST00000511346 GGCXP38435 758 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms