RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CCDC144AA2RUR9 1427 aa19.18■□□□□ 0.66
USP38-202ENST00000510377 PRG4Q92954 1404 aaPredicted RBP19.18■□□□□ 0.66
USP38-202ENST00000510377 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
USP38-202ENST00000510377 MIA2Q96PC5 1412 aa19.18■□□□□ 0.66
USP38-202ENST00000510377 APAF1O14727 1248 aa19.18■□□□□ 0.66
USP38-202ENST00000510377 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
USP38-202ENST00000510377 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
USP38-202ENST00000510377 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
USP38-202ENST00000510377 CENPQQ7L2Z9 268 aaPredicted RBP19.17■□□□□ 0.66
USP38-202ENST00000510377 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
USP38-202ENST00000510377 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
USP38-202ENST00000510377 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
USP38-202ENST00000510377 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
USP38-202ENST00000510377 MLECQ14165 292 aa19.15■□□□□ 0.66
USP38-202ENST00000510377 C20orf194Q5TEA3 1177 aa19.15■□□□□ 0.66
USP38-202ENST00000510377 RPRD2Q5VT52 1461 aaKnown RBP19.14■□□□□ 0.66
USP38-202ENST00000510377 ABCC5O15440 1437 aa19.14■□□□□ 0.65
USP38-202ENST00000510377 COG6Q9Y2V7 657 aa19.14■□□□□ 0.65
USP38-202ENST00000510377 CFAP43Q8NDM7 1665 aa19.11■□□□□ 0.65
USP38-202ENST00000510377 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
USP38-202ENST00000510377 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
USP38-202ENST00000510377 SAFB2Q14151 953 aaKnown RBP eCLIP19.1■□□□□ 0.65
USP38-202ENST00000510377 NAP1L5Q96NT1 182 aaPredicted RBP19.1■□□□□ 0.65
USP38-202ENST00000510377 PTPRGP23470 1445 aa19.09■□□□□ 0.65
USP38-202ENST00000510377 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
USP38-202ENST00000510377 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
USP38-202ENST00000510377 SNAPC4Q5SXM2 1469 aa19.08■□□□□ 0.65
USP38-202ENST00000510377 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
USP38-202ENST00000510377 CENPJQ9HC77 1338 aaPredicted RBP19.07■□□□□ 0.64
USP38-202ENST00000510377 HECW1Q76N89 1606 aa19.05■□□□□ 0.64
USP38-202ENST00000510377 ROCK1Q13464 1354 aa19.05■□□□□ 0.64
USP38-202ENST00000510377 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
USP38-202ENST00000510377 PANK1Q8TE04 598 aa19.04■□□□□ 0.64
USP38-202ENST00000510377 BCAR3O75815 825 aa19.03■□□□□ 0.64
USP38-202ENST00000510377 MFAP1P55081 439 aaKnown RBP19.03■□□□□ 0.64
USP38-202ENST00000510377 ANP32BQ92688 251 aaKnown RBP19.03■□□□□ 0.64
USP38-202ENST00000510377 UGGT2Q9NYU1 1516 aa19.03■□□□□ 0.64
USP38-202ENST00000510377 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
USP38-202ENST00000510377 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.64
USP38-202ENST00000510377 TRIM44Q96DX7 344 aaPredicted RBP19.02■□□□□ 0.63
USP38-202ENST00000510377 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
USP38-202ENST00000510377 CUL7Q14999 1698 aa19.01■□□□□ 0.63
USP38-202ENST00000510377 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
USP38-202ENST00000510377 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
USP38-202ENST00000510377 GGT6Q6P531 493 aa19.01■□□□□ 0.63
USP38-202ENST00000510377 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
USP38-202ENST00000510377 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
USP38-202ENST00000510377 NCLP19338 710 aaKnown RBP18.99■□□□□ 0.63
USP38-202ENST00000510377 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
USP38-202ENST00000510377 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
USP38-202ENST00000510377 TROQ12816 1431 aaPredicted RBP18.99■□□□□ 0.63
USP38-202ENST00000510377 C9orf84Q5VXU9 1444 aa18.98■□□□□ 0.63
USP38-202ENST00000510377 MAPK8IP3Q9UPT6 1336 aa18.98■□□□□ 0.63
USP38-202ENST00000510377 E9PSI1 815 aa18.97■□□□□ 0.63
USP38-202ENST00000510377 KIF3BO15066 747 aa18.97■□□□□ 0.63
USP38-202ENST00000510377 NUTM2DQ5VT03 806 aaPredicted RBP18.97■□□□□ 0.63
USP38-202ENST00000510377 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
USP38-202ENST00000510377 TRAK1Q9UPV9 953 aa18.96■□□□□ 0.63
USP38-202ENST00000510377 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
USP38-202ENST00000510377 L1TD1Q5T7N2 865 aaKnown RBP18.96■□□□□ 0.63
USP38-202ENST00000510377 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
USP38-202ENST00000510377 HSCBQ8IWL3 235 aa18.96■□□□□ 0.63
USP38-202ENST00000510377 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
USP38-202ENST00000510377 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
USP38-202ENST00000510377 GLIPR1L2Q4G1C9 344 aa18.93■□□□□ 0.62
USP38-202ENST00000510377 CAMSAP2Q08AD1 1489 aa18.93■□□□□ 0.62
USP38-202ENST00000510377 PMFBP1Q8TBY8 1022 aa18.93■□□□□ 0.62
USP38-202ENST00000510377 IQGAP2Q13576 1575 aa18.93■□□□□ 0.62
USP38-202ENST00000510377 SMC4Q9NTJ3 1288 aa18.93■□□□□ 0.62
USP38-202ENST00000510377 STK26Q9P289 416 aa18.92■□□□□ 0.62
USP38-202ENST00000510377 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
USP38-202ENST00000510377 PLB1Q6P1J6 1458 aa18.91■□□□□ 0.62
USP38-202ENST00000510377 KDM6BO15054 1643 aa18.9■□□□□ 0.62
USP38-202ENST00000510377 GOLGA6L3A6NEY3 463 aa18.9■□□□□ 0.62
USP38-202ENST00000510377 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
USP38-202ENST00000510377 TPRNQ4KMQ1 711 aa18.89■□□□□ 0.62
USP38-202ENST00000510377 SPAG9O60271 1321 aaKnown RBP18.89■□□□□ 0.61
USP38-202ENST00000510377 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
USP38-202ENST00000510377 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
USP38-202ENST00000510377 SRPK2P78362 688 aaKnown RBP18.88■□□□□ 0.61
USP38-202ENST00000510377 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
USP38-202ENST00000510377 TEX14Q8IWB6 1497 aa18.88■□□□□ 0.61
USP38-202ENST00000510377 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
USP38-202ENST00000510377 TCOF1Q13428 1488 aaKnown RBP18.87■□□□□ 0.61
USP38-202ENST00000510377 FAM69CQ0P6D2 419 aa18.87■□□□□ 0.61
USP38-202ENST00000510377 CTTNBP2Q8WZ74 1663 aa18.87■□□□□ 0.61
USP38-202ENST00000510377 ERBINQ96RT1 1412 aa18.87■□□□□ 0.61
USP38-202ENST00000510377 KANK1Q14678 1352 aa18.86■□□□□ 0.61
USP38-202ENST00000510377 PRKCSHP14314 528 aaPredicted RBP18.86■□□□□ 0.61
USP38-202ENST00000510377 CFAP70Q5T0N1 1121 aa18.86■□□□□ 0.61
USP38-202ENST00000510377 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
USP38-202ENST00000510377 GOLGA6L22H0YM25 854 aa18.85■□□□□ 0.61
USP38-202ENST00000510377 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
USP38-202ENST00000510377 DUSP27Q5VZP5 1158 aa18.85■□□□□ 0.61
USP38-202ENST00000510377 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
USP38-202ENST00000510377 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
USP38-202ENST00000510377 SPATA31E1Q6ZUB1 1445 aa18.84■□□□□ 0.61
USP38-202ENST00000510377 APBB1O00213 710 aa18.84■□□□□ 0.61
USP38-202ENST00000510377 POGKQ9P215 609 aa18.84■□□□□ 0.61
USP38-202ENST00000510377 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms