RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 SCUBE2Q9NQ36 999 aa6.41□□□□□ -1.38
CALCOCO2-216ENST00000509784 AMHR2Q16671 573 aa6.4□□□□□ -1.38
CALCOCO2-216ENST00000509784 ZNF454Q8N9F8 522 aa6.4□□□□□ -1.38
CALCOCO2-216ENST00000509784 RIMBP2O15034 1052 aa6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 FOSBP53539 338 aa6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 TTLL12Q14166 644 aaPredicted RBP6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 PARP9Q8IXQ6 854 aa6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 ZNF710Q8N1W2 664 aa6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 FAM117AQ9C073 453 aa6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 DAXXQ9UER7 740 aaPredicted RBP6.39□□□□□ -1.39
CALCOCO2-216ENST00000509784 MAMSTRQ6ZN01 415 aa6.38□□□□□ -1.39
CALCOCO2-216ENST00000509784 ZDHHC16Q969W1 377 aa6.38□□□□□ -1.39
CALCOCO2-216ENST00000509784 C6orf132Q5T0Z8 1188 aa6.37□□□□□ -1.39
CALCOCO2-216ENST00000509784 GPR153Q6NV75 609 aa6.37□□□□□ -1.39
CALCOCO2-216ENST00000509784 C14orf37Q86TY3 774 aa6.37□□□□□ -1.39
CALCOCO2-216ENST00000509784 ZSWIM6Q9HCJ5 1215 aa6.37□□□□□ -1.39
CALCOCO2-216ENST00000509784 ERICH6Q7L0X2 663 aa6.36□□□□□ -1.39
CALCOCO2-216ENST00000509784 ADAM33Q9BZ11 813 aa6.36□□□□□ -1.39
CALCOCO2-216ENST00000509784 FAM161AQ3B820 660 aa6.35□□□□□ -1.39
CALCOCO2-216ENST00000509784 LHX6Q9UPM6 363 aa6.35□□□□□ -1.39
CALCOCO2-216ENST00000509784 PLEKHG3A1L390 1219 aa6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 PADI6Q6TGC4 694 aa6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 GIGYF2Q6Y7W6 1299 aaKnown RBP6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 CERKQ8TCT0 537 aa6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 DDRGK1Q96HY6 314 aa6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 PHOX2BQ99453 314 aa6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 REPIN1Q9BWE0 567 aaKnown RBP6.34□□□□□ -1.39
CALCOCO2-216ENST00000509784 MDM2Q00987 491 aaPredicted RBP6.33□□□□□ -1.4
CALCOCO2-216ENST00000509784 MS4A1P11836 297 aa6.32□□□□□ -1.4
CALCOCO2-216ENST00000509784 CLCN1P35523 988 aa6.32□□□□□ -1.4
CALCOCO2-216ENST00000509784 PPP4R3BQ5MIZ7 849 aa6.32□□□□□ -1.4
CALCOCO2-216ENST00000509784 SNPHO15079 494 aa6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 OATP04181 439 aa6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 PRSS12P56730 875 aa6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 METTL3Q86U44 580 aaKnown RBP6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 NLRP7Q8WX94 980 aa6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 GPCPD1Q9NPB8 672 aa6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 ADGRG1Q9Y653 693 aa6.31□□□□□ -1.4
CALCOCO2-216ENST00000509784 COL9A1P20849 921 aa6.3□□□□□ -1.4
CALCOCO2-216ENST00000509784 CDCA7LQ96GN5 454 aa6.3□□□□□ -1.4
CALCOCO2-216ENST00000509784 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
CALCOCO2-216ENST00000509784 PSDA5PKW4 1024 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-216ENST00000509784 HOXB1P14653 301 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-216ENST00000509784 SSTR3P32745 418 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-216ENST00000509784 TTC13Q8NBP0 860 aa6.29□□□□□ -1.4
CALCOCO2-216ENST00000509784 PXYLP1Q8TE99 480 aa6.29□□□□□ -1.4
CALCOCO2-216ENST00000509784 BCL2L12Q9HB09 334 aa6.29□□□□□ -1.4
CALCOCO2-216ENST00000509784 PTPREP23469 700 aa6.28□□□□□ -1.4
CALCOCO2-216ENST00000509784 RBM27Q9P2N5 1060 aaKnown RBP6.28□□□□□ -1.4
CALCOCO2-216ENST00000509784 RBM46Q8TBY0 533 aaKnown RBP6.27□□□□□ -1.41
CALCOCO2-216ENST00000509784 FAM198AQ9UFP1 575 aa6.27□□□□□ -1.41
CALCOCO2-216ENST00000509784 PPP1R3GB7ZBB8 358 aa6.26□□□□□ -1.41
CALCOCO2-216ENST00000509784 OTUD5Q96G74 571 aa6.26□□□□□ -1.41
CALCOCO2-216ENST00000509784 FAM217BQ9NTX9 383 aaPredicted RBP6.26□□□□□ -1.41
CALCOCO2-216ENST00000509784 TSKSQ9UJT2 592 aa6.26□□□□□ -1.41
CALCOCO2-216ENST00000509784 PCMTD1Q96MG8 357 aaPredicted RBP6.25□□□□□ -1.41
CALCOCO2-216ENST00000509784 KCNK17Q96T54 332 aa6.25□□□□□ -1.41
CALCOCO2-216ENST00000509784 BEGAINQ9BUH8 593 aa6.25□□□□□ -1.41
CALCOCO2-216ENST00000509784 NUDT18Q6ZVK8 323 aa6.24□□□□□ -1.41
CALCOCO2-216ENST00000509784 GOPCQ9HD26 462 aa6.24□□□□□ -1.41
CALCOCO2-216ENST00000509784 ATP1B4Q9UN42 357 aaPredicted RBP6.24□□□□□ -1.41
CALCOCO2-216ENST00000509784 RCCD1A6NED2 376 aa6.23□□□□□ -1.41
CALCOCO2-216ENST00000509784 C3orf80F5H4A9 247 aa6.23□□□□□ -1.41
CALCOCO2-216ENST00000509784 PACS2Q86VP3 889 aa6.23□□□□□ -1.41
CALCOCO2-216ENST00000509784 EYA1Q99502 592 aa6.23□□□□□ -1.41
CALCOCO2-216ENST00000509784 PLSCR2Q9NRY7 297 aa6.23□□□□□ -1.41
CALCOCO2-216ENST00000509784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 TRIM6-TRIM34B2RNG4 842 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 PROX2Q3B8N5 592 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 SH3D19Q5HYK7 790 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 TATDN2Q93075 761 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 KCNH8Q96L42 1107 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 RSPH6AQ9H0K4 717 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 PNMA3Q9UL41 463 aa6.22□□□□□ -1.41
CALCOCO2-216ENST00000509784 NBPF26B4DH59 902 aa6.21□□□□□ -1.42
CALCOCO2-216ENST00000509784 SMAPO00193 183 aa6.21□□□□□ -1.42
CALCOCO2-216ENST00000509784 SUPT5HO00267 1087 aaKnown RBP6.21□□□□□ -1.42
CALCOCO2-216ENST00000509784 LHX8Q68G74 356 aa6.21□□□□□ -1.42
CALCOCO2-216ENST00000509784 POLR3EQ9NVU0 708 aa6.21□□□□□ -1.42
CALCOCO2-216ENST00000509784 ERBB3P21860 1342 aa6.21□□□□□ -1.42
CALCOCO2-216ENST00000509784 PSEN2P49810 448 aa6.2□□□□□ -1.42
CALCOCO2-216ENST00000509784 SKIV2LQ15477 1246 aaKnown RBP6.2□□□□□ -1.42
CALCOCO2-216ENST00000509784 VARS2Q5ST30 1063 aaKnown RBP6.2□□□□□ -1.42
CALCOCO2-216ENST00000509784 DNAJB2P25686 324 aa6.19□□□□□ -1.42
CALCOCO2-216ENST00000509784 MYSM1Q5VVJ2 828 aa6.19□□□□□ -1.42
CALCOCO2-216ENST00000509784 PROCA1Q8NCQ7 364 aaPredicted RBP6.19□□□□□ -1.42
CALCOCO2-216ENST00000509784 TBC1D2Q9BYX2 928 aa6.19□□□□□ -1.42
CALCOCO2-216ENST00000509784 KIAA1468Q9P260 1216 aa6.19□□□□□ -1.42
CALCOCO2-216ENST00000509784 DDX11L8A8MPP1 907 aa6.18□□□□□ -1.42
CALCOCO2-216ENST00000509784 ZMYND15Q9H091 742 aa6.18□□□□□ -1.42
CALCOCO2-216ENST00000509784 ARHGAP33O14559 1287 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 ST18O60284 1047 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 ONECUT3O60422 494 aaPredicted RBP6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 CD46P15529 392 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 SULF1Q8IWU6 871 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 MARVELD3Q96A59 401 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 ZBED2Q9BTP6 218 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 TMEM134Q9H6X4 195 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 AXIN2Q9Y2T1 843 aa6.17□□□□□ -1.42
CALCOCO2-216ENST00000509784 CLK2P49760 499 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms