RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 EPAS1Q99814 870 aa10.23□□□□□ -0.77
SEC31A-229ENST00000509691 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
SEC31A-229ENST00000509691 COL9A1P20849 921 aa10.22□□□□□ -0.77
SEC31A-229ENST00000509691 NBPF3Q9H094 633 aa10.22□□□□□ -0.77
SEC31A-229ENST00000509691 PTPN5P54829 565 aa10.21□□□□□ -0.77
SEC31A-229ENST00000509691 DDX12PQ92771 950 aa10.21□□□□□ -0.77
SEC31A-229ENST00000509691 WDR70Q9NW82 654 aa10.21□□□□□ -0.77
SEC31A-229ENST00000509691 E2F4Q16254 413 aa10.2□□□□□ -0.78
SEC31A-229ENST00000509691 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
SEC31A-229ENST00000509691 C6orf132Q5T0Z8 1188 aa10.19□□□□□ -0.78
SEC31A-229ENST00000509691 WNT2BQ93097 391 aa10.19□□□□□ -0.78
SEC31A-229ENST00000509691 PDIA6Q15084 440 aa10.18□□□□□ -0.78
SEC31A-229ENST00000509691 THSD4Q6ZMP0 1018 aa10.18□□□□□ -0.78
SEC31A-229ENST00000509691 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
SEC31A-229ENST00000509691 RABGEF1Q9UJ41 708 aa10.18□□□□□ -0.78
SEC31A-229ENST00000509691 SPDYE16A6NNV3 312 aaPredicted RBP10.17□□□□□ -0.78
SEC31A-229ENST00000509691 NBR1Q14596 966 aa10.16□□□□□ -0.78
SEC31A-229ENST00000509691 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
SEC31A-229ENST00000509691 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
SEC31A-229ENST00000509691 MAP3K7O43318 606 aa10.12□□□□□ -0.79
SEC31A-229ENST00000509691 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
SEC31A-229ENST00000509691 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
SEC31A-229ENST00000509691 LAPTM4BQ86VI4 370 aa10.11□□□□□ -0.79
SEC31A-229ENST00000509691 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
SEC31A-229ENST00000509691 TSR1Q2NL82 804 aaKnown RBP10.1□□□□□ -0.79
SEC31A-229ENST00000509691 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
SEC31A-229ENST00000509691 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
SEC31A-229ENST00000509691 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
SEC31A-229ENST00000509691 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
SEC31A-229ENST00000509691 BCAMP50895 628 aa10.05□□□□□ -0.8
SEC31A-229ENST00000509691 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
SEC31A-229ENST00000509691 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
SEC31A-229ENST00000509691 FAM98CQ17RN3 349 aaKnown RBP10.04□□□□□ -0.8
SEC31A-229ENST00000509691 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
SEC31A-229ENST00000509691 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
SEC31A-229ENST00000509691 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
SEC31A-229ENST00000509691 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
SEC31A-229ENST00000509691 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
SEC31A-229ENST00000509691 OSBPP22059 807 aa10□□□□□ -0.81
SEC31A-229ENST00000509691 PRSS12P56730 875 aa10□□□□□ -0.81
SEC31A-229ENST00000509691 IFFO2Q5TF58 517 aa10□□□□□ -0.81
SEC31A-229ENST00000509691 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
SEC31A-229ENST00000509691 CDHR5Q9HBB8 845 aa9.98□□□□□ -0.81
SEC31A-229ENST00000509691 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.98□□□□□ -0.81
SEC31A-229ENST00000509691 WBP1LQ9NX94 342 aa9.97□□□□□ -0.81
SEC31A-229ENST00000509691 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
SEC31A-229ENST00000509691 FAM198AQ9UFP1 575 aa9.96□□□□□ -0.82
SEC31A-229ENST00000509691 SMAPO00193 183 aa9.95□□□□□ -0.82
SEC31A-229ENST00000509691 ARHGEF1Q92888 912 aaKnown RBP9.95□□□□□ -0.82
SEC31A-229ENST00000509691 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
SEC31A-229ENST00000509691 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
SEC31A-229ENST00000509691 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
SEC31A-229ENST00000509691 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
SEC31A-229ENST00000509691 TATDN2Q93075 761 aa9.94□□□□□ -0.82
SEC31A-229ENST00000509691 A0A0G2JS52 829 aa9.93□□□□□ -0.82
SEC31A-229ENST00000509691 ITGBL1O95965 494 aaPredicted RBP9.93□□□□□ -0.82
SEC31A-229ENST00000509691 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
SEC31A-229ENST00000509691 C3orf80F5H4A9 247 aa9.91□□□□□ -0.82
SEC31A-229ENST00000509691 SAMD7Q7Z3H4 446 aa9.91□□□□□ -0.82
SEC31A-229ENST00000509691 RBM27Q9P2N5 1060 aaKnown RBP9.91□□□□□ -0.82
SEC31A-229ENST00000509691 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
SEC31A-229ENST00000509691 PPP4CP60510 307 aa9.9□□□□□ -0.82
SEC31A-229ENST00000509691 NUDT18Q6ZVK8 323 aa9.9□□□□□ -0.82
SEC31A-229ENST00000509691 RGS20O76081 388 aa9.89□□□□□ -0.83
SEC31A-229ENST00000509691 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
SEC31A-229ENST00000509691 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
SEC31A-229ENST00000509691 KCNC4Q03721 635 aa9.87□□□□□ -0.83
SEC31A-229ENST00000509691 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
SEC31A-229ENST00000509691 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
SEC31A-229ENST00000509691 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
SEC31A-229ENST00000509691 RNF40O75150 1001 aa9.84□□□□□ -0.83
SEC31A-229ENST00000509691 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
SEC31A-229ENST00000509691 PTGDRQ13258 359 aa9.8□□□□□ -0.84
SEC31A-229ENST00000509691 SWT1Q5T5J6 900 aaKnown RBP9.79□□□□□ -0.84
SEC31A-229ENST00000509691 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
SEC31A-229ENST00000509691 SEMA3EO15041 775 aa9.78□□□□□ -0.84
SEC31A-229ENST00000509691 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
SEC31A-229ENST00000509691 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
SEC31A-229ENST00000509691 EYA1Q99502 592 aa9.77□□□□□ -0.85
SEC31A-229ENST00000509691 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
SEC31A-229ENST00000509691 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
SEC31A-229ENST00000509691 MTRQ99707 1265 aa9.76□□□□□ -0.85
SEC31A-229ENST00000509691 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
SEC31A-229ENST00000509691 APLP1P51693 650 aa9.75□□□□□ -0.85
SEC31A-229ENST00000509691 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
SEC31A-229ENST00000509691 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
SEC31A-229ENST00000509691 FCHSD2O94868 740 aa9.71□□□□□ -0.86
SEC31A-229ENST00000509691 DNAJB2P25686 324 aa9.71□□□□□ -0.86
SEC31A-229ENST00000509691 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
SEC31A-229ENST00000509691 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
SEC31A-229ENST00000509691 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
SEC31A-229ENST00000509691 FAM161AQ3B820 660 aa9.69□□□□□ -0.86
SEC31A-229ENST00000509691 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
SEC31A-229ENST00000509691 COPS2P61201 443 aa9.68□□□□□ -0.86
SEC31A-229ENST00000509691 SMYD5Q6GMV2 418 aa9.68□□□□□ -0.86
SEC31A-229ENST00000509691 TMEM134Q9H6X4 195 aa9.68□□□□□ -0.86
SEC31A-229ENST00000509691 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
SEC31A-229ENST00000509691 RCCD1A6NED2 376 aa9.66□□□□□ -0.86
SEC31A-229ENST00000509691 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
SEC31A-229ENST00000509691 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms