RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
GYPB-210ENST00000508841 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
GYPB-210ENST00000508841 PLA2G2EQ9NZK7 142 aa13.1□□□□□ -0.31
GYPB-210ENST00000508841 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
GYPB-210ENST00000508841 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
GYPB-210ENST00000508841 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
GYPB-210ENST00000508841 TYW1BQ6NUM6 668 aa13.07□□□□□ -0.32
GYPB-210ENST00000508841 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
GYPB-210ENST00000508841 HCSTQ9UBK5 93 aa13.06□□□□□ -0.32
GYPB-210ENST00000508841 LHX6Q9UPM6 363 aa13.06□□□□□ -0.32
GYPB-210ENST00000508841 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
GYPB-210ENST00000508841 FCHSD2O94868 740 aa13.05□□□□□ -0.32
GYPB-210ENST00000508841 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
GYPB-210ENST00000508841 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
GYPB-210ENST00000508841 HIC1Q14526 733 aa13.03□□□□□ -0.32
GYPB-210ENST00000508841 GPR37O15354 613 aa13.02□□□□□ -0.33
GYPB-210ENST00000508841 MAP3K7O43318 606 aa13.02□□□□□ -0.33
GYPB-210ENST00000508841 FOSBP53539 338 aa13.02□□□□□ -0.33
GYPB-210ENST00000508841 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
GYPB-210ENST00000508841 SLC24A3Q9HC58 644 aa13.02□□□□□ -0.33
GYPB-210ENST00000508841 AK7Q96M32 723 aa13□□□□□ -0.33
GYPB-210ENST00000508841 GNPATO15228 680 aa12.99□□□□□ -0.33
GYPB-210ENST00000508841 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
GYPB-210ENST00000508841 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
GYPB-210ENST00000508841 PTGDRQ13258 359 aa12.98□□□□□ -0.33
GYPB-210ENST00000508841 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
GYPB-210ENST00000508841 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
GYPB-210ENST00000508841 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
GYPB-210ENST00000508841 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
GYPB-210ENST00000508841 MAP2K5Q13163 448 aa12.96□□□□□ -0.33
GYPB-210ENST00000508841 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
GYPB-210ENST00000508841 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
GYPB-210ENST00000508841 ARHGAP33O14559 1287 aa12.94□□□□□ -0.34
GYPB-210ENST00000508841 C6orf132Q5T0Z8 1188 aa12.91□□□□□ -0.34
GYPB-210ENST00000508841 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
GYPB-210ENST00000508841 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
GYPB-210ENST00000508841 IRF6O14896 467 aa12.88□□□□□ -0.35
GYPB-210ENST00000508841 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
GYPB-210ENST00000508841 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
GYPB-210ENST00000508841 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
GYPB-210ENST00000508841 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
GYPB-210ENST00000508841 TK2O00142 265 aa12.86□□□□□ -0.35
GYPB-210ENST00000508841 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
GYPB-210ENST00000508841 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
GYPB-210ENST00000508841 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
GYPB-210ENST00000508841 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
GYPB-210ENST00000508841 TRIM66O15016 1216 aa12.84□□□□□ -0.35
GYPB-210ENST00000508841 PTPREP23469 700 aa12.84□□□□□ -0.35
GYPB-210ENST00000508841 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
GYPB-210ENST00000508841 HRO43593 1189 aa12.83□□□□□ -0.36
GYPB-210ENST00000508841 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
GYPB-210ENST00000508841 PSEN2P49810 448 aa12.82□□□□□ -0.36
GYPB-210ENST00000508841 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
GYPB-210ENST00000508841 FECHP22830 423 aa12.81□□□□□ -0.36
GYPB-210ENST00000508841 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
GYPB-210ENST00000508841 PDE4DQ08499 809 aa12.8□□□□□ -0.36
GYPB-210ENST00000508841 AMHR2Q16671 573 aa12.79□□□□□ -0.36
GYPB-210ENST00000508841 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
GYPB-210ENST00000508841 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
GYPB-210ENST00000508841 PRSS12P56730 875 aa12.78□□□□□ -0.36
GYPB-210ENST00000508841 OATP04181 439 aa12.77□□□□□ -0.37
GYPB-210ENST00000508841 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
GYPB-210ENST00000508841 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
GYPB-210ENST00000508841 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
GYPB-210ENST00000508841 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
GYPB-210ENST00000508841 COL9A1P20849 921 aa12.71□□□□□ -0.37
GYPB-210ENST00000508841 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
GYPB-210ENST00000508841 KCNK17Q96T54 332 aa12.7□□□□□ -0.38
GYPB-210ENST00000508841 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
GYPB-210ENST00000508841 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
GYPB-210ENST00000508841 PTPN5P54829 565 aa12.69□□□□□ -0.38
GYPB-210ENST00000508841 TTLL12Q14166 644 aaPredicted RBP12.69□□□□□ -0.38
GYPB-210ENST00000508841 CLCN1P35523 988 aa12.68□□□□□ -0.38
GYPB-210ENST00000508841 METTL3Q86U44 580 aaKnown RBP12.68□□□□□ -0.38
GYPB-210ENST00000508841 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
GYPB-210ENST00000508841 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
GYPB-210ENST00000508841 NBPF26B4DH59 902 aa12.67□□□□□ -0.38
GYPB-210ENST00000508841 PARP9Q8IXQ6 854 aa12.67□□□□□ -0.38
GYPB-210ENST00000508841 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
GYPB-210ENST00000508841 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
GYPB-210ENST00000508841 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
GYPB-210ENST00000508841 RGS20O76081 388 aa12.64□□□□□ -0.39
GYPB-210ENST00000508841 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
GYPB-210ENST00000508841 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
GYPB-210ENST00000508841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
GYPB-210ENST00000508841 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
GYPB-210ENST00000508841 ZBED2Q9BTP6 218 aa12.62□□□□□ -0.39
GYPB-210ENST00000508841 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
GYPB-210ENST00000508841 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
GYPB-210ENST00000508841 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
GYPB-210ENST00000508841 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
GYPB-210ENST00000508841 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
GYPB-210ENST00000508841 FAM198AQ9UFP1 575 aa12.6□□□□□ -0.39
GYPB-210ENST00000508841 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
GYPB-210ENST00000508841 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
GYPB-210ENST00000508841 TATDN2Q93075 761 aa12.59□□□□□ -0.39
GYPB-210ENST00000508841 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
GYPB-210ENST00000508841 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
GYPB-210ENST00000508841 PHOX2BQ99453 314 aa12.58□□□□□ -0.4
GYPB-210ENST00000508841 EYA1Q99502 592 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms