RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 CDHR5Q9HBB8 845 aa16.94■□□□□ 0.3
CHD1-205ENST00000508756 C6orf132Q5T0Z8 1188 aa16.93■□□□□ 0.3
CHD1-205ENST00000508756 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
CHD1-205ENST00000508756 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
CHD1-205ENST00000508756 KCNK17Q96T54 332 aa16.91■□□□□ 0.3
CHD1-205ENST00000508756 AXIN2Q9Y2T1 843 aa16.91■□□□□ 0.3
CHD1-205ENST00000508756 PTPREP23469 700 aa16.89■□□□□ 0.29
CHD1-205ENST00000508756 GPIHBP1Q8IV16 184 aa16.88■□□□□ 0.29
CHD1-205ENST00000508756 PSEN2P49810 448 aa16.87■□□□□ 0.29
CHD1-205ENST00000508756 COL9A1P20849 921 aa16.86■□□□□ 0.29
CHD1-205ENST00000508756 ARHGAP33O14559 1287 aa16.84■□□□□ 0.29
CHD1-205ENST00000508756 GPR37O15354 613 aa16.83■□□□□ 0.28
CHD1-205ENST00000508756 PBX2P40425 430 aa16.83■□□□□ 0.28
CHD1-205ENST00000508756 NPDC1Q9NQX5 325 aaPredicted RBP16.82■□□□□ 0.28
CHD1-205ENST00000508756 PPP1R3GB7ZBB8 358 aa16.81■□□□□ 0.28
CHD1-205ENST00000508756 PTGDRQ13258 359 aa16.81■□□□□ 0.28
CHD1-205ENST00000508756 DMRTA1Q5VZB9 504 aa16.81■□□□□ 0.28
CHD1-205ENST00000508756 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
CHD1-205ENST00000508756 FCHSD2O94868 740 aa16.78■□□□□ 0.28
CHD1-205ENST00000508756 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
CHD1-205ENST00000508756 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
CHD1-205ENST00000508756 KRTAP3-3Q9BYR6 98 aa16.75■□□□□ 0.27
CHD1-205ENST00000508756 KRTAP3-2Q9BYR7 98 aa16.75■□□□□ 0.27
CHD1-205ENST00000508756 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
CHD1-205ENST00000508756 LSM11P83369 360 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHD1-205ENST00000508756 PROX2Q3B8N5 592 aa16.72■□□□□ 0.27
CHD1-205ENST00000508756 ZBED2Q9BTP6 218 aa16.72■□□□□ 0.27
CHD1-205ENST00000508756 HIC1Q14526 733 aa16.71■□□□□ 0.27
CHD1-205ENST00000508756 PRSS12P56730 875 aa16.7■□□□□ 0.26
CHD1-205ENST00000508756 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
CHD1-205ENST00000508756 GNPATO15228 680 aa16.69■□□□□ 0.26
CHD1-205ENST00000508756 FECHP22830 423 aa16.69■□□□□ 0.26
CHD1-205ENST00000508756 PADI6Q6TGC4 694 aa16.69■□□□□ 0.26
CHD1-205ENST00000508756 PLSCR2Q9NRY7 297 aa16.69■□□□□ 0.26
CHD1-205ENST00000508756 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
CHD1-205ENST00000508756 ANKRD13DQ6ZTN6 518 aa16.66■□□□□ 0.26
CHD1-205ENST00000508756 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
CHD1-205ENST00000508756 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
CHD1-205ENST00000508756 ZMYND10O75800 440 aa16.65■□□□□ 0.26
CHD1-205ENST00000508756 VPS9D1Q9Y2B5 631 aa16.65■□□□□ 0.26
CHD1-205ENST00000508756 TRIM6-TRIM34B2RNG4 842 aa16.64■□□□□ 0.25
CHD1-205ENST00000508756 SLC4A5Q9BY07 1137 aa16.64■□□□□ 0.25
CHD1-205ENST00000508756 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
CHD1-205ENST00000508756 TTC13Q8NBP0 860 aa16.63■□□□□ 0.25
CHD1-205ENST00000508756 ADGRD1Q6QNK2 874 aa16.62■□□□□ 0.25
CHD1-205ENST00000508756 BARGINQ6ZT62 677 aa16.61■□□□□ 0.25
CHD1-205ENST00000508756 TK2O00142 265 aa16.6■□□□□ 0.25
CHD1-205ENST00000508756 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
CHD1-205ENST00000508756 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
CHD1-205ENST00000508756 C3orf80F5H4A9 247 aa16.58■□□□□ 0.24
CHD1-205ENST00000508756 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
CHD1-205ENST00000508756 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
CHD1-205ENST00000508756 RABGEF1Q9UJ41 708 aa16.56■□□□□ 0.24
CHD1-205ENST00000508756 MAP2K5Q13163 448 aa16.55■□□□□ 0.24
CHD1-205ENST00000508756 PACS2Q86VP3 889 aa16.55■□□□□ 0.24
CHD1-205ENST00000508756 KRI1Q8N9T8 703 aaKnown RBP16.54■□□□□ 0.24
CHD1-205ENST00000508756 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
CHD1-205ENST00000508756 SMAPO00193 183 aa16.52■□□□□ 0.24
CHD1-205ENST00000508756 HRO43593 1189 aa16.52■□□□□ 0.24
CHD1-205ENST00000508756 PCDH10Q9P2E7 1040 aa16.52■□□□□ 0.24
CHD1-205ENST00000508756 NUDT18Q6ZVK8 323 aa16.51■□□□□ 0.23
CHD1-205ENST00000508756 TATDN2Q93075 761 aa16.51■□□□□ 0.23
CHD1-205ENST00000508756 SEPT9Q9UHD8 586 aaPredicted RBP16.51■□□□□ 0.23
CHD1-205ENST00000508756 PNMA3Q9UL41 463 aa16.51■□□□□ 0.23
CHD1-205ENST00000508756 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
CHD1-205ENST00000508756 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
CHD1-205ENST00000508756 BHMG1C9JSJ3 638 aaPredicted RBP16.5■□□□□ 0.23
CHD1-205ENST00000508756 IRF6O14896 467 aa16.5■□□□□ 0.23
CHD1-205ENST00000508756 SLC24A3Q9HC58 644 aa16.5■□□□□ 0.23
CHD1-205ENST00000508756 CCDC102AQ96A19 550 aa16.49■□□□□ 0.23
CHD1-205ENST00000508756 NBPF3Q9H094 633 aa16.47■□□□□ 0.23
CHD1-205ENST00000508756 EYA1Q99502 592 aa16.45■□□□□ 0.22
CHD1-205ENST00000508756 METTL3Q86U44 580 aaKnown RBP16.44■□□□□ 0.22
CHD1-205ENST00000508756 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
CHD1-205ENST00000508756 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
CHD1-205ENST00000508756 OATP04181 439 aa16.42■□□□□ 0.22
CHD1-205ENST00000508756 PXYLP1Q8TE99 480 aa16.42■□□□□ 0.22
CHD1-205ENST00000508756 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
CHD1-205ENST00000508756 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
CHD1-205ENST00000508756 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
CHD1-205ENST00000508756 AK7Q96M32 723 aa16.39■□□□□ 0.21
CHD1-205ENST00000508756 LAPTM4BQ86VI4 370 aa16.38■□□□□ 0.21
CHD1-205ENST00000508756 NLRP7Q8WX94 980 aa16.38■□□□□ 0.21
CHD1-205ENST00000508756 RCCD1A6NED2 376 aa16.36■□□□□ 0.21
CHD1-205ENST00000508756 TRIM66O15016 1216 aa16.34■□□□□ 0.21
CHD1-205ENST00000508756 SPNS2Q8IVW8 549 aa16.34■□□□□ 0.21
CHD1-205ENST00000508756 ZFRQ96KR1 1074 aaKnown RBP16.34■□□□□ 0.21
CHD1-205ENST00000508756 GOLGA8CPA6NN73 597 aa16.32■□□□□ 0.2
CHD1-205ENST00000508756 DNAJB2P25686 324 aa16.32■□□□□ 0.2
CHD1-205ENST00000508756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
CHD1-205ENST00000508756 TMEM134Q9H6X4 195 aa16.29■□□□□ 0.2
CHD1-205ENST00000508756 SWT1Q5T5J6 900 aaKnown RBP16.28■□□□□ 0.2
CHD1-205ENST00000508756 SAMD7Q7Z3H4 446 aa16.28■□□□□ 0.2
CHD1-205ENST00000508756 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
CHD1-205ENST00000508756 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.2
CHD1-205ENST00000508756 AMHR2Q16671 573 aa16.26■□□□□ 0.19
CHD1-205ENST00000508756 WNT2BQ93097 391 aa16.26■□□□□ 0.19
CHD1-205ENST00000508756 ANKK1Q8NFD2 765 aa16.25■□□□□ 0.19
CHD1-205ENST00000508756 PDE4DQ08499 809 aa16.24■□□□□ 0.19
CHD1-205ENST00000508756 KCTD12Q96CX2 325 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms