RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 PLEKHH2Q8IVE3 1493 aa6.59□□□□□ -1.35
APC-208ENST00000508624 HDGFP51858 240 aaKnown RBP6.59□□□□□ -1.35
APC-208ENST00000508624 EFCAB2Q5VUJ9 269 aa6.59□□□□□ -1.35
APC-208ENST00000508624 GAPVD1Q14C86 1478 aa6.58□□□□□ -1.36
APC-208ENST00000508624 BIVM-ERCC5R4GMW8 1640 aa6.58□□□□□ -1.36
APC-208ENST00000508624 POGKQ9P215 609 aa6.58□□□□□ -1.36
APC-208ENST00000508624 HDGFL2Q7Z4V5 671 aaPredicted RBP6.58□□□□□ -1.36
APC-208ENST00000508624 HMMRO75330 724 aa6.58□□□□□ -1.36
APC-208ENST00000508624 MTERF4Q7Z6M4 381 aaKnown RBP6.58□□□□□ -1.36
APC-208ENST00000508624 GOLGA6L4A6NEF3 574 aa6.57□□□□□ -1.36
APC-208ENST00000508624 CDK11BP21127 795 aaKnown RBP6.57□□□□□ -1.36
APC-208ENST00000508624 MAP7D2Q96T17 732 aa6.57□□□□□ -1.36
APC-208ENST00000508624 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
APC-208ENST00000508624 KCNH8Q96L42 1107 aa6.57□□□□□ -1.36
APC-208ENST00000508624 WDR97A6NE52 1622 aa6.57□□□□□ -1.36
APC-208ENST00000508624 KIF7Q2M1P5 1343 aa6.57□□□□□ -1.36
APC-208ENST00000508624 U2SURPO15042 1029 aaKnown RBP6.57□□□□□ -1.36
APC-208ENST00000508624 ST18O60284 1047 aa6.57□□□□□ -1.36
APC-208ENST00000508624 HSP90AA2PQ14568 343 aaPredicted RBP6.56□□□□□ -1.36
APC-208ENST00000508624 CHMP5Q9NZZ3 219 aa6.56□□□□□ -1.36
APC-208ENST00000508624 TDRD9Q8NDG6 1382 aaKnown RBP6.56□□□□□ -1.36
APC-208ENST00000508624 CC2D2AQ9P2K1 1620 aa6.56□□□□□ -1.36
APC-208ENST00000508624 CHMP4CQ96CF2 233 aa6.56□□□□□ -1.36
APC-208ENST00000508624 ROCK1Q13464 1354 aa6.56□□□□□ -1.36
APC-208ENST00000508624 TERF2IPQ9NYB0 399 aa6.56□□□□□ -1.36
APC-208ENST00000508624 ST20-MTHFSA0A0A6YYL1 179 aa6.55□□□□□ -1.36
APC-208ENST00000508624 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
APC-208ENST00000508624 THOC2Q8NI27 1593 aaKnown RBP6.55□□□□□ -1.36
APC-208ENST00000508624 FOXD1Q16676 465 aa6.55□□□□□ -1.36
APC-208ENST00000508624 KIAA1211Q6ZU35 1233 aa6.55□□□□□ -1.36
APC-208ENST00000508624 EXOC6Q8TAG9 804 aa6.55□□□□□ -1.36
APC-208ENST00000508624 AKNAQ7Z591 1439 aa6.55□□□□□ -1.36
APC-208ENST00000508624 SMC4Q9NTJ3 1288 aa6.54□□□□□ -1.36
APC-208ENST00000508624 PRDM2Q13029 1718 aa6.54□□□□□ -1.36
APC-208ENST00000508624 ZKSCAN2Q63HK3 967 aa6.54□□□□□ -1.36
APC-208ENST00000508624 ITPRIPQ8IWB1 547 aa6.54□□□□□ -1.36
APC-208ENST00000508624 CRBNQ96SW2 442 aa6.54□□□□□ -1.36
APC-208ENST00000508624 ATP6V1DQ9Y5K8 247 aa6.54□□□□□ -1.36
APC-208ENST00000508624 DDX19BQ9UMR2 479 aa6.54□□□□□ -1.36
APC-208ENST00000508624 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.54□□□□□ -1.36
APC-208ENST00000508624 KIAA1107Q9UPP5 1409 aa6.54□□□□□ -1.36
APC-208ENST00000508624 U2AF1L5P0DN76 240 aaPredicted RBP6.54□□□□□ -1.36
APC-208ENST00000508624 U2AF1Q01081 240 aaKnown RBP eCLIP6.54□□□□□ -1.36
APC-208ENST00000508624 FAM43AQ8N2R8 423 aa6.53□□□□□ -1.36
APC-208ENST00000508624 DNMBPQ6XZF7 1577 aa6.53□□□□□ -1.36
APC-208ENST00000508624 KCNJ4P48050 445 aa6.53□□□□□ -1.36
APC-208ENST00000508624 MRE11P49959 708 aa6.53□□□□□ -1.36
APC-208ENST00000508624 PANK3Q9H999 370 aa6.53□□□□□ -1.36
APC-208ENST00000508624 ANKRD50Q9ULJ7 1429 aa6.53□□□□□ -1.36
APC-208ENST00000508624 NUCB2P80303 420 aa6.53□□□□□ -1.36
APC-208ENST00000508624 CT47B1P0C2W7 299 aaPredicted RBP6.52□□□□□ -1.37
APC-208ENST00000508624 PDE3AQ14432 1141 aa6.52□□□□□ -1.37
APC-208ENST00000508624 KIF16BQ96L93 1317 aa6.52□□□□□ -1.37
APC-208ENST00000508624 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
APC-208ENST00000508624 TPM4P67936 248 aa6.52□□□□□ -1.37
APC-208ENST00000508624 SRPK2P78362 688 aaKnown RBP6.52□□□□□ -1.37
APC-208ENST00000508624 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
APC-208ENST00000508624 KIF3AQ9Y496 699 aa6.52□□□□□ -1.37
APC-208ENST00000508624 SPAG9O60271 1321 aaKnown RBP6.52□□□□□ -1.37
APC-208ENST00000508624 TPM2P07951 284 aa6.52□□□□□ -1.37
APC-208ENST00000508624 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
APC-208ENST00000508624 OS9Q13438 667 aaPredicted RBP6.51□□□□□ -1.37
APC-208ENST00000508624 RTF1Q92541 710 aaKnown RBP6.51□□□□□ -1.37
APC-208ENST00000508624 PTPN23Q9H3S7 1636 aa6.51□□□□□ -1.37
APC-208ENST00000508624 CCDC34Q96HJ3 373 aa6.51□□□□□ -1.37
APC-208ENST00000508624 PCF11O94913 1555 aaKnown RBP6.51□□□□□ -1.37
APC-208ENST00000508624 REC8O95072 547 aa6.51□□□□□ -1.37
APC-208ENST00000508624 BACH2Q9BYV9 841 aa6.51□□□□□ -1.37
APC-208ENST00000508624 FGD1P98174 961 aa6.51□□□□□ -1.37
APC-208ENST00000508624 DRC7Q8IY82 874 aa6.5□□□□□ -1.37
APC-208ENST00000508624 NAIPQ13075 1403 aa6.5□□□□□ -1.37
APC-208ENST00000508624 PLCB2Q00722 1185 aa6.5□□□□□ -1.37
APC-208ENST00000508624 RUNDC1Q96C34 613 aa6.5□□□□□ -1.37
APC-208ENST00000508624 GZF1Q9H116 711 aaPredicted RBP6.5□□□□□ -1.37
APC-208ENST00000508624 EVC2Q86UK5 1308 aa6.5□□□□□ -1.37
APC-208ENST00000508624 GRIN2BQ13224 1484 aa6.5□□□□□ -1.37
APC-208ENST00000508624 CLUAP1Q96AJ1 413 aa6.49□□□□□ -1.37
APC-208ENST00000508624 DDX49Q9Y6V7 483 aaKnown RBP6.49□□□□□ -1.37
APC-208ENST00000508624 TPM3P06753 285 aa6.49□□□□□ -1.37
APC-208ENST00000508624 STK31Q9BXU1 1019 aa6.49□□□□□ -1.37
APC-208ENST00000508624 API5Q9BZZ5 524 aaKnown RBP6.49□□□□□ -1.37
APC-208ENST00000508624 CIZ1Q9ULV3 898 aaPredicted RBP6.49□□□□□ -1.37
APC-208ENST00000508624 CFAP43Q8NDM7 1665 aa6.49□□□□□ -1.37
APC-208ENST00000508624 PNISRQ8TF01 805 aaKnown RBP6.49□□□□□ -1.37
APC-208ENST00000508624 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
APC-208ENST00000508624 ABCA10Q8WWZ4 1543 aa6.48□□□□□ -1.37
APC-208ENST00000508624 SENP3-EIF4A1A0A087X0R7 540 aa6.48□□□□□ -1.37
APC-208ENST00000508624 DZIP1LQ8IYY4 767 aaKnown RBP6.48□□□□□ -1.37
APC-208ENST00000508624 JPH4Q96JJ6 628 aa6.48□□□□□ -1.37
APC-208ENST00000508624 TROQ12816 1431 aaPredicted RBP6.48□□□□□ -1.37
APC-208ENST00000508624 MCM2P49736 904 aa6.48□□□□□ -1.37
APC-208ENST00000508624 DAPK1P53355 1430 aa6.47□□□□□ -1.37
APC-208ENST00000508624 KIF21AQ7Z4S6 1674 aa6.47□□□□□ -1.37
APC-208ENST00000508624 IL27Q8NEV9 243 aa6.47□□□□□ -1.37
APC-208ENST00000508624 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
APC-208ENST00000508624 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.47□□□□□ -1.37
APC-208ENST00000508624 MBD3O95983 291 aa6.47□□□□□ -1.37
APC-208ENST00000508624 HNRNPMP52272 730 aaKnown RBP eCLIP6.47□□□□□ -1.37
APC-208ENST00000508624 C22orf23Q9BZE7 217 aa6.47□□□□□ -1.37
APC-208ENST00000508624 VGFO15240 615 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms