RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
SMARCA5-202ENST00000508573 CAMK2BQ13554 666 aa9.42□□□□□ -0.9
SMARCA5-202ENST00000508573 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
SMARCA5-202ENST00000508573 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
SMARCA5-202ENST00000508573 SPRYD3Q8NCJ5 442 aa9.39□□□□□ -0.91
SMARCA5-202ENST00000508573 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
SMARCA5-202ENST00000508573 EPAS1Q99814 870 aa9.39□□□□□ -0.91
SMARCA5-202ENST00000508573 KIAA1468Q9P260 1216 aa9.39□□□□□ -0.91
SMARCA5-202ENST00000508573 DDX12PQ92771 950 aa9.38□□□□□ -0.91
SMARCA5-202ENST00000508573 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
SMARCA5-202ENST00000508573 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
SMARCA5-202ENST00000508573 BCAMP50895 628 aa9.33□□□□□ -0.92
SMARCA5-202ENST00000508573 ONECUT3O60422 494 aaPredicted RBP9.32□□□□□ -0.92
SMARCA5-202ENST00000508573 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
SMARCA5-202ENST00000508573 ZFRQ96KR1 1074 aaKnown RBP9.32□□□□□ -0.92
SMARCA5-202ENST00000508573 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
SMARCA5-202ENST00000508573 SEPT9Q9UHD8 586 aaPredicted RBP9.32□□□□□ -0.92
SMARCA5-202ENST00000508573 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SMARCA5-202ENST00000508573 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
SMARCA5-202ENST00000508573 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
SMARCA5-202ENST00000508573 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
SMARCA5-202ENST00000508573 NBR1Q14596 966 aa9.29□□□□□ -0.92
SMARCA5-202ENST00000508573 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
SMARCA5-202ENST00000508573 MAP3K7O43318 606 aa9.28□□□□□ -0.92
SMARCA5-202ENST00000508573 SPDYE16A6NNV3 312 aaPredicted RBP9.27□□□□□ -0.93
SMARCA5-202ENST00000508573 E2F4Q16254 413 aa9.27□□□□□ -0.93
SMARCA5-202ENST00000508573 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
SMARCA5-202ENST00000508573 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
SMARCA5-202ENST00000508573 WBP1LQ9NX94 342 aa9.27□□□□□ -0.93
SMARCA5-202ENST00000508573 A0A0G2JS52 829 aa9.26□□□□□ -0.93
SMARCA5-202ENST00000508573 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
SMARCA5-202ENST00000508573 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
SMARCA5-202ENST00000508573 PDIA6Q15084 440 aa9.26□□□□□ -0.93
SMARCA5-202ENST00000508573 PACS2Q86VP3 889 aa9.26□□□□□ -0.93
SMARCA5-202ENST00000508573 FAM98CQ17RN3 349 aaKnown RBP9.25□□□□□ -0.93
SMARCA5-202ENST00000508573 RGS20O76081 388 aa9.24□□□□□ -0.93
SMARCA5-202ENST00000508573 RTN4Q9NQC3 1192 aaKnown RBP9.24□□□□□ -0.93
SMARCA5-202ENST00000508573 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
SMARCA5-202ENST00000508573 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
SMARCA5-202ENST00000508573 NYAP1Q6ZVC0 841 aa9.22□□□□□ -0.93
SMARCA5-202ENST00000508573 LRCH3Q96II8 777 aa9.22□□□□□ -0.93
SMARCA5-202ENST00000508573 HPS5Q9UPZ3 1129 aa9.22□□□□□ -0.93
SMARCA5-202ENST00000508573 SMAPO00193 183 aa9.21□□□□□ -0.94
SMARCA5-202ENST00000508573 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
SMARCA5-202ENST00000508573 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
SMARCA5-202ENST00000508573 ITGBL1O95965 494 aaPredicted RBP9.2□□□□□ -0.94
SMARCA5-202ENST00000508573 PRSS12P56730 875 aa9.2□□□□□ -0.94
SMARCA5-202ENST00000508573 KCNC4Q03721 635 aa9.2□□□□□ -0.94
SMARCA5-202ENST00000508573 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
SMARCA5-202ENST00000508573 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
SMARCA5-202ENST00000508573 PPP4CP60510 307 aa9.18□□□□□ -0.94
SMARCA5-202ENST00000508573 CERKQ8TCT0 537 aa9.17□□□□□ -0.94
SMARCA5-202ENST00000508573 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
SMARCA5-202ENST00000508573 ARIH1Q9Y4X5 557 aaPredicted RBP9.17□□□□□ -0.94
SMARCA5-202ENST00000508573 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
SMARCA5-202ENST00000508573 OSBPP22059 807 aa9.15□□□□□ -0.94
SMARCA5-202ENST00000508573 SAMD7Q7Z3H4 446 aa9.15□□□□□ -0.94
SMARCA5-202ENST00000508573 TATDN2Q93075 761 aa9.15□□□□□ -0.94
SMARCA5-202ENST00000508573 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
SMARCA5-202ENST00000508573 HDGFP51858 240 aaKnown RBP9.13□□□□□ -0.95
SMARCA5-202ENST00000508573 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
SMARCA5-202ENST00000508573 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
SMARCA5-202ENST00000508573 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
SMARCA5-202ENST00000508573 RNF40O75150 1001 aa9.08□□□□□ -0.96
SMARCA5-202ENST00000508573 TJAP1Q5JTD0 557 aa9.07□□□□□ -0.96
SMARCA5-202ENST00000508573 TSHZ2Q9NRE2 1034 aa9.07□□□□□ -0.96
SMARCA5-202ENST00000508573 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
SMARCA5-202ENST00000508573 PADI6Q6TGC4 694 aa9.04□□□□□ -0.96
SMARCA5-202ENST00000508573 MTRQ99707 1265 aa9.04□□□□□ -0.96
SMARCA5-202ENST00000508573 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
SMARCA5-202ENST00000508573 RBM27Q9P2N5 1060 aaKnown RBP9.03□□□□□ -0.96
SMARCA5-202ENST00000508573 SWT1Q5T5J6 900 aaKnown RBP9.02□□□□□ -0.97
SMARCA5-202ENST00000508573 Q6ZNB5 142 aa9.02□□□□□ -0.97
SMARCA5-202ENST00000508573 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
SMARCA5-202ENST00000508573 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
SMARCA5-202ENST00000508573 APLP1P51693 650 aa9.01□□□□□ -0.97
SMARCA5-202ENST00000508573 TTC13Q8NBP0 860 aa9.01□□□□□ -0.97
SMARCA5-202ENST00000508573 ARHGEF1Q92888 912 aaKnown RBP9.01□□□□□ -0.97
SMARCA5-202ENST00000508573 PPP1R18Q6NYC8 613 aa9□□□□□ -0.97
SMARCA5-202ENST00000508573 GFRA3O60609 400 aa8.98□□□□□ -0.97
SMARCA5-202ENST00000508573 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
SMARCA5-202ENST00000508573 PRKD2Q9BZL6 878 aa8.98□□□□□ -0.97
SMARCA5-202ENST00000508573 COPS2P61201 443 aa8.97□□□□□ -0.97
SMARCA5-202ENST00000508573 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
SMARCA5-202ENST00000508573 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
SMARCA5-202ENST00000508573 NECTIN2Q92692 538 aa8.97□□□□□ -0.97
SMARCA5-202ENST00000508573 EYA1Q99502 592 aa8.97□□□□□ -0.97
SMARCA5-202ENST00000508573 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
SMARCA5-202ENST00000508573 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
SMARCA5-202ENST00000508573 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
SMARCA5-202ENST00000508573 LAPTM4AQ15012 233 aa8.93□□□□□ -0.98
SMARCA5-202ENST00000508573 PTGDRQ13258 359 aa8.92□□□□□ -0.98
SMARCA5-202ENST00000508573 RBM46Q8TBY0 533 aaKnown RBP8.91□□□□□ -0.98
SMARCA5-202ENST00000508573 GGCXP38435 758 aa8.9□□□□□ -0.98
SMARCA5-202ENST00000508573 FAM161AQ3B820 660 aa8.9□□□□□ -0.98
SMARCA5-202ENST00000508573 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
SMARCA5-202ENST00000508573 ZPR1O75312 459 aa8.89□□□□□ -0.99
SMARCA5-202ENST00000508573 DNAJB2P25686 324 aa8.89□□□□□ -0.99
SMARCA5-202ENST00000508573 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
SMARCA5-202ENST00000508573 PCDHB3Q9Y5E6 796 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms