RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
SKI-204ENST00000508416 ROCK1Q13464 1354 aa16■□□□□ 0.15
SKI-204ENST00000508416 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
SKI-204ENST00000508416 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
SKI-204ENST00000508416 ERBINQ96RT1 1412 aa16■□□□□ 0.15
SKI-204ENST00000508416 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
SKI-204ENST00000508416 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
SKI-204ENST00000508416 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
SKI-204ENST00000508416 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
SKI-204ENST00000508416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.155e-7■■■■□ 24.3
SKI-204ENST00000508416 RNF17Q9BXT8 1623 aaKnown RBP15.97■□□□□ 0.15
SKI-204ENST00000508416 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
SKI-204ENST00000508416 C3P01024 1663 aa15.95■□□□□ 0.14
SKI-204ENST00000508416 MROH2AA6NES4 1674 aa15.95■□□□□ 0.14
SKI-204ENST00000508416 MROH1Q8NDA8 1641 aa15.93■□□□□ 0.14
SKI-204ENST00000508416 KDM5DQ9BY66 1539 aa15.92■□□□□ 0.14
SKI-204ENST00000508416 SETD1BQ9UPS6 1966 aaKnown RBP15.91■□□□□ 0.14
SKI-204ENST00000508416 DEPDC5O75140 1603 aa15.91■□□□□ 0.14
SKI-204ENST00000508416 KANK1Q14678 1352 aa15.91■□□□□ 0.14
SKI-204ENST00000508416 FAM135AQ9P2D6 1515 aa15.91■□□□□ 0.14
SKI-204ENST00000508416 ABCC3O15438 1527 aa15.89■□□□□ 0.13
SKI-204ENST00000508416 CEP152O94986 1710 aa15.89■□□□□ 0.13
SKI-204ENST00000508416 ZC3H13Q5T200 1668 aaKnown RBP15.89■□□□□ 0.13
SKI-204ENST00000508416 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
SKI-204ENST00000508416 NAIPQ13075 1403 aa15.88■□□□□ 0.13
SKI-204ENST00000508416 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
SKI-204ENST00000508416 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
SKI-204ENST00000508416 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
SKI-204ENST00000508416 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
SKI-204ENST00000508416 NPATQ14207 1427 aa15.85■□□□□ 0.13
SKI-204ENST00000508416 CAMSAP1Q5T5Y3 1602 aa15.85■□□□□ 0.13
SKI-204ENST00000508416 PZPP20742 1482 aa15.84■□□□□ 0.13
SKI-204ENST00000508416 UNC13BO14795 1591 aa15.84■□□□□ 0.13
SKI-204ENST00000508416 VWDEQ8N2E2 1590 aa15.84■□□□□ 0.13
SKI-204ENST00000508416 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.13
SKI-204ENST00000508416 NUP155O75694 1391 aa15.83■□□□□ 0.12
SKI-204ENST00000508416 LMTK2Q8IWU2 1503 aa15.82■□□□□ 0.12
SKI-204ENST00000508416 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
SKI-204ENST00000508416 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
SKI-204ENST00000508416 LMTK3Q96Q04 1460 aa15.81■□□□□ 0.12
SKI-204ENST00000508416 ARHGAP31Q2M1Z3 1444 aa15.8■□□□□ 0.12
SKI-204ENST00000508416 TNRQ92752 1358 aa15.8■□□□□ 0.12
SKI-204ENST00000508416 HSPA2P54652 639 aa15.79■□□□□ 0.12
SKI-204ENST00000508416 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
SKI-204ENST00000508416 TET3O43151 1660 aa15.78■□□□□ 0.12
SKI-204ENST00000508416 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
SKI-204ENST00000508416 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
SKI-204ENST00000508416 EFCAB6Q5THR3 1501 aa15.77■□□□□ 0.11
SKI-204ENST00000508416 SPATA31D1Q6ZQQ2 1576 aa15.76■□□□□ 0.11
SKI-204ENST00000508416 MYO3AQ8NEV4 1616 aa15.76■□□□□ 0.11
SKI-204ENST00000508416 E9PCH4 1651 aa15.73■□□□□ 0.11
SKI-204ENST00000508416 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
SKI-204ENST00000508416 A2ML1A8K2U0 1454 aa15.72■□□□□ 0.11
SKI-204ENST00000508416 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
SKI-204ENST00000508416 CEP170BQ9Y4F5 1589 aaPredicted RBP15.72■□□□□ 0.11
SKI-204ENST00000508416 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
SKI-204ENST00000508416 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
SKI-204ENST00000508416 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
SKI-204ENST00000508416 NOS1P29475 1434 aa15.71■□□□□ 0.11
SKI-204ENST00000508416 ZNF142P52746 1687 aaPredicted RBP15.71■□□□□ 0.11
SKI-204ENST00000508416 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
SKI-204ENST00000508416 IDI1Q13907 227 aa15.7■□□□□ 0.1
SKI-204ENST00000508416 PKD2Q13563 968 aa15.69■□□□□ 0.1
SKI-204ENST00000508416 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
SKI-204ENST00000508416 SLC52A1Q9NWF4 448 aa15.69■□□□□ 0.1
SKI-204ENST00000508416 SYNMO15061 1565 aa15.68■□□□□ 0.1
SKI-204ENST00000508416 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
SKI-204ENST00000508416 HRCP23327 699 aa15.67■□□□□ 0.1
SKI-204ENST00000508416 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
SKI-204ENST00000508416 UGGT1Q9NYU2 1555 aa15.66■□□□□ 0.1
SKI-204ENST00000508416 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
SKI-204ENST00000508416 STRCQ7RTU9 1775 aa15.65■□□□□ 0.1
SKI-204ENST00000508416 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
SKI-204ENST00000508416 UBR1Q8IWV7 1749 aa15.64■□□□□ 0.09
SKI-204ENST00000508416 CERKQ8TCT0 537 aa15.64■□□□□ 0.09
SKI-204ENST00000508416 NCKAP5LQ9HCH0 1330 aa15.64■□□□□ 0.09
SKI-204ENST00000508416 PTPRTO14522 1441 aa15.63■□□□□ 0.09
SKI-204ENST00000508416 FOXD1Q16676 465 aa15.63■□□□□ 0.09
SKI-204ENST00000508416 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
SKI-204ENST00000508416 ANKLE2Q86XL3 938 aa15.62■□□□□ 0.09
SKI-204ENST00000508416 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
SKI-204ENST00000508416 PLA2R1Q13018 1463 aa15.62■□□□□ 0.09
SKI-204ENST00000508416 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
SKI-204ENST00000508416 ILDR2Q71H61 639 aa15.6■□□□□ 0.09
SKI-204ENST00000508416 KDM5AP29375 1690 aaKnown RBP15.6■□□□□ 0.09
SKI-204ENST00000508416 MYO5BQ9ULV0 1848 aa15.59■□□□□ 0.09
SKI-204ENST00000508416 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
SKI-204ENST00000508416 ADGRB3O60242 1522 aa15.58■□□□□ 0.08
SKI-204ENST00000508416 TMEM131LA2VDJ0 1609 aa15.57■□□□□ 0.08
SKI-204ENST00000508416 EID1Q9Y6B2 187 aa15.57■□□□□ 0.08
SKI-204ENST00000508416 TMEM2Q9UHN6 1383 aa15.57■□□□□ 0.08
SKI-204ENST00000508416 TRPM2O94759 1503 aa15.57■□□□□ 0.08
SKI-204ENST00000508416 POLR1AO95602 1720 aaPredicted RBP15.57■□□□□ 0.08
SKI-204ENST00000508416 SOCS7O14512 581 aa15.56■□□□□ 0.08
SKI-204ENST00000508416 LTKP29376 864 aa15.56■□□□□ 0.08
SKI-204ENST00000508416 SLIT1O75093 1534 aa15.56■□□□□ 0.08
SKI-204ENST00000508416 CLTCL1P53675 1640 aa15.55■□□□□ 0.08
SKI-204ENST00000508416 ARHGAP23Q9P227 1491 aa15.55■□□□□ 0.08
SKI-204ENST00000508416 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
SKI-204ENST00000508416 KIF1BO60333 1816 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms