RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
DDX41-208ENST00000507955 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
DDX41-208ENST00000507955 PLA2R1Q13018 1463 aa19.98■□□□□ 0.79
DDX41-208ENST00000507955 KDM5CP41229 1560 aa19.97■□□□□ 0.79
DDX41-208ENST00000507955 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
DDX41-208ENST00000507955 UHRF1BP1Q6BDS2 1440 aa19.96■□□□□ 0.79
DDX41-208ENST00000507955 IRX6P78412 446 aaPredicted RBP19.96■□□□□ 0.79
DDX41-208ENST00000507955 RALGAPBQ86X10 1494 aa19.94■□□□□ 0.78
DDX41-208ENST00000507955 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
DDX41-208ENST00000507955 DHX29Q7Z478 1369 aaKnown RBP19.93■□□□□ 0.78
DDX41-208ENST00000507955 UHRF1BP1LA0JNW5 1464 aa19.92■□□□□ 0.78
DDX41-208ENST00000507955 MAST1Q9Y2H9 1570 aa19.92■□□□□ 0.78
DDX41-208ENST00000507955 NEFLP07196 543 aa19.91■□□□□ 0.78
DDX41-208ENST00000507955 POLR1AO95602 1720 aaPredicted RBP19.91■□□□□ 0.78
DDX41-208ENST00000507955 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
DDX41-208ENST00000507955 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
DDX41-208ENST00000507955 UNC13BO14795 1591 aa19.89■□□□□ 0.77
DDX41-208ENST00000507955 ABCC1P33527 1531 aa19.88■□□□□ 0.77
DDX41-208ENST00000507955 PLXNC1O60486 1568 aa19.88■□□□□ 0.77
DDX41-208ENST00000507955 DUOX2Q9NRD8 1548 aa19.87■□□□□ 0.77
DDX41-208ENST00000507955 PRAG1Q86YV5 1406 aa19.86■□□□□ 0.77
DDX41-208ENST00000507955 A2MP01023 1474 aa19.86■□□□□ 0.77
DDX41-208ENST00000507955 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.77
DDX41-208ENST00000507955 ERBINQ96RT1 1412 aa19.83■□□□□ 0.76
DDX41-208ENST00000507955 WDR7Q9Y4E6 1490 aa19.83■□□□□ 0.76
DDX41-208ENST00000507955 FANCAO15360 1455 aa19.8■□□□□ 0.76
DDX41-208ENST00000507955 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
DDX41-208ENST00000507955 KIF3BO15066 747 aa19.79■□□□□ 0.76
DDX41-208ENST00000507955 TRPM1Q7Z4N2 1603 aa19.79■□□□□ 0.76
DDX41-208ENST00000507955 ARID4BQ4LE39 1312 aaPredicted RBP19.78■□□□□ 0.76
DDX41-208ENST00000507955 MAGI2Q86UL8 1455 aa19.78■□□□□ 0.76
DDX41-208ENST00000507955 ASXL2Q76L83 1435 aa19.77■□□□□ 0.76
DDX41-208ENST00000507955 ZFYVE16Q7Z3T8 1539 aa19.76■□□□□ 0.75
DDX41-208ENST00000507955 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
DDX41-208ENST00000507955 ZBED9Q6R2W3 1325 aa19.75■□□□□ 0.75
DDX41-208ENST00000507955 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
DDX41-208ENST00000507955 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
DDX41-208ENST00000507955 TESK2Q96S53 571 aa19.74■□□□□ 0.75
DDX41-208ENST00000507955 RBM19Q9Y4C8 960 aaKnown RBP19.74■□□□□ 0.75
DDX41-208ENST00000507955 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
DDX41-208ENST00000507955 ADGRL1O94910 1474 aa19.73■□□□□ 0.75
DDX41-208ENST00000507955 E9PCH4 1651 aa19.72■□□□□ 0.75
DDX41-208ENST00000507955 PNISRQ8TF01 805 aaKnown RBP19.72■□□□□ 0.75
DDX41-208ENST00000507955 RTEL1-TNFRSF6BF6WH68 1400 aa19.7■□□□□ 0.74
DDX41-208ENST00000507955 ATP10AO60312 1499 aa19.7■□□□□ 0.74
DDX41-208ENST00000507955 CC2D1BQ5T0F9 858 aaKnown RBP19.7■□□□□ 0.74
DDX41-208ENST00000507955 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
DDX41-208ENST00000507955 GPRASP1Q5JY77 1395 aa19.69■□□□□ 0.74
DDX41-208ENST00000507955 ABCA9Q8IUA7 1624 aa19.69■□□□□ 0.74
DDX41-208ENST00000507955 NPM1P06748 294 aaKnown RBP eCLIP19.69■□□□□ 0.74
DDX41-208ENST00000507955 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
DDX41-208ENST00000507955 ARAP3Q8WWN8 1544 aa19.67■□□□□ 0.74
DDX41-208ENST00000507955 PER1O15534 1290 aaPredicted RBP19.67■□□□□ 0.74
DDX41-208ENST00000507955 PANK3Q9H999 370 aa19.66■□□□□ 0.74
DDX41-208ENST00000507955 UGGT1Q9NYU2 1555 aa19.65■□□□□ 0.74
DDX41-208ENST00000507955 PRDM15P57071 1507 aaPredicted RBP19.65■□□□□ 0.74
DDX41-208ENST00000507955 MYBBP1AQ9BQG0 1328 aaKnown RBP19.64■□□□□ 0.73
DDX41-208ENST00000507955 INO80Q9ULG1 1556 aaPredicted RBP19.64■□□□□ 0.73
DDX41-208ENST00000507955 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
DDX41-208ENST00000507955 KANK1Q14678 1352 aa19.62■□□□□ 0.73
DDX41-208ENST00000507955 TMF1P82094 1093 aa19.61■□□□□ 0.73
DDX41-208ENST00000507955 RALBP1Q15311 655 aa19.61■□□□□ 0.73
DDX41-208ENST00000507955 COL17A1Q9UMD9 1497 aaPredicted RBP19.61■□□□□ 0.73
DDX41-208ENST00000507955 GGT6Q6P531 493 aa19.6■□□□□ 0.73
DDX41-208ENST00000507955 TRPM2O94759 1503 aa19.6■□□□□ 0.73
DDX41-208ENST00000507955 PTPRTO14522 1441 aa19.6■□□□□ 0.73
DDX41-208ENST00000507955 SPHKAPQ2M3C7 1700 aa19.59■□□□□ 0.73
DDX41-208ENST00000507955 DEPDC5O75140 1603 aa19.59■□□□□ 0.73
DDX41-208ENST00000507955 KTN1Q86UP2 1357 aaKnown RBP19.59■□□□□ 0.73
DDX41-208ENST00000507955 RAPGEF3O95398 923 aa19.58■□□□□ 0.73
DDX41-208ENST00000507955 CHGAP10645 457 aaKnown RBP19.58■□□□□ 0.72
DDX41-208ENST00000507955 CFAP70Q5T0N1 1121 aa19.58■□□□□ 0.72
DDX41-208ENST00000507955 CD109Q6YHK3 1445 aa19.58■□□□□ 0.72
DDX41-208ENST00000507955 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
DDX41-208ENST00000507955 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
DDX41-208ENST00000507955 EIF2AK4Q9P2K8 1649 aaKnown RBP19.57■□□□□ 0.72
DDX41-208ENST00000507955 KIDINS220Q9ULH0 1771 aa19.57■□□□□ 0.72
DDX41-208ENST00000507955 ADGRF5Q8IZF2 1346 aa19.56■□□□□ 0.72
DDX41-208ENST00000507955 MROH1Q8NDA8 1641 aa19.56■□□□□ 0.72
DDX41-208ENST00000507955 BRD4O60885 1362 aaPredicted RBP19.56■□□□□ 0.72
DDX41-208ENST00000507955 PARD3Q8TEW0 1356 aa19.56■□□□□ 0.72
DDX41-208ENST00000507955 CFAP65Q6ZU64 1925 aaKnown RBP19.56■□□□□ 0.72
DDX41-208ENST00000507955 TET3O43151 1660 aa19.55■□□□□ 0.72
DDX41-208ENST00000507955 NLRP13Q86W25 1043 aa19.55■□□□□ 0.72
DDX41-208ENST00000507955 NUDCQ9Y266 331 aa19.54■□□□□ 0.72
DDX41-208ENST00000507955 VWDEQ8N2E2 1590 aa19.54■□□□□ 0.72
DDX41-208ENST00000507955 LRPPRCP42704 1394 aaKnown RBP19.54■□□□□ 0.72
DDX41-208ENST00000507955 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
DDX41-208ENST00000507955 CEP152O94986 1710 aa19.53■□□□□ 0.72
DDX41-208ENST00000507955 LAMC1P11047 1609 aa19.53■□□□□ 0.72
DDX41-208ENST00000507955 MSH5O43196 834 aa19.53■□□□□ 0.72
DDX41-208ENST00000507955 RNF17Q9BXT8 1623 aaKnown RBP19.52■□□□□ 0.72
DDX41-208ENST00000507955 ZNF518AQ6AHZ1 1483 aa19.52■□□□□ 0.72
DDX41-208ENST00000507955 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.71
DDX41-208ENST00000507955 PPP4R2Q9NY27 417 aa19.5■□□□□ 0.71
DDX41-208ENST00000507955 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
DDX41-208ENST00000507955 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
DDX41-208ENST00000507955 PPRC1Q5VV67 1664 aaKnown RBP19.48■□□□□ 0.71
DDX41-208ENST00000507955 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
DDX41-208ENST00000507955 POGZQ7Z3K3 1410 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms