RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 WNT2BQ93097 391 aa12.02□□□□□ -0.49
SPCS3-202ENST00000507001 RABGEF1Q9UJ41 708 aa12.01□□□□□ -0.49
SPCS3-202ENST00000507001 EPAS1Q99814 870 aa11.98□□□□□ -0.49
SPCS3-202ENST00000507001 RGS20O76081 388 aa11.97□□□□□ -0.49
SPCS3-202ENST00000507001 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
SPCS3-202ENST00000507001 COL9A1P20849 921 aa11.95□□□□□ -0.5
SPCS3-202ENST00000507001 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
SPCS3-202ENST00000507001 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
SPCS3-202ENST00000507001 PROX2Q3B8N5 592 aa11.93□□□□□ -0.5
SPCS3-202ENST00000507001 DPYSL4O14531 572 aa11.91□□□□□ -0.5
SPCS3-202ENST00000507001 ANKK1Q8NFD2 765 aa11.91□□□□□ -0.5
SPCS3-202ENST00000507001 C6orf132Q5T0Z8 1188 aa11.9□□□□□ -0.5
SPCS3-202ENST00000507001 A0A0G2JS52 829 aa11.88□□□□□ -0.51
SPCS3-202ENST00000507001 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
SPCS3-202ENST00000507001 SOWAHBA6NEL2 793 aa11.86□□□□□ -0.51
SPCS3-202ENST00000507001 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
SPCS3-202ENST00000507001 TRIM6-TRIM34B2RNG4 842 aa11.85□□□□□ -0.51
SPCS3-202ENST00000507001 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
SPCS3-202ENST00000507001 PDIA6Q15084 440 aa11.85□□□□□ -0.51
SPCS3-202ENST00000507001 ZFRQ96KR1 1074 aaKnown RBP11.84□□□□□ -0.51
SPCS3-202ENST00000507001 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
SPCS3-202ENST00000507001 BCAMP50895 628 aa11.81□□□□□ -0.52
SPCS3-202ENST00000507001 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
SPCS3-202ENST00000507001 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
SPCS3-202ENST00000507001 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
SPCS3-202ENST00000507001 DDX12PQ92771 950 aa11.8□□□□□ -0.52
SPCS3-202ENST00000507001 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
SPCS3-202ENST00000507001 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
SPCS3-202ENST00000507001 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
SPCS3-202ENST00000507001 RBM33Q96EV2 1170 aaKnown RBP11.78□□□□□ -0.52
SPCS3-202ENST00000507001 NBR1Q14596 966 aa11.77□□□□□ -0.53
SPCS3-202ENST00000507001 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
SPCS3-202ENST00000507001 MAP3K7O43318 606 aa11.74□□□□□ -0.53
SPCS3-202ENST00000507001 WBP1LQ9NX94 342 aa11.74□□□□□ -0.53
SPCS3-202ENST00000507001 E2F4Q16254 413 aa11.73□□□□□ -0.53
SPCS3-202ENST00000507001 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
SPCS3-202ENST00000507001 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
SPCS3-202ENST00000507001 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
SPCS3-202ENST00000507001 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
SPCS3-202ENST00000507001 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
SPCS3-202ENST00000507001 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
SPCS3-202ENST00000507001 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
SPCS3-202ENST00000507001 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
SPCS3-202ENST00000507001 KCNC4Q03721 635 aa11.69□□□□□ -0.54
SPCS3-202ENST00000507001 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
SPCS3-202ENST00000507001 PRSS12P56730 875 aa11.67□□□□□ -0.54
SPCS3-202ENST00000507001 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
SPCS3-202ENST00000507001 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
SPCS3-202ENST00000507001 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
SPCS3-202ENST00000507001 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
SPCS3-202ENST00000507001 RBM27Q9P2N5 1060 aaKnown RBP11.64□□□□□ -0.55
SPCS3-202ENST00000507001 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
SPCS3-202ENST00000507001 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
SPCS3-202ENST00000507001 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
SPCS3-202ENST00000507001 FAM198AQ9UFP1 575 aa11.61□□□□□ -0.55
SPCS3-202ENST00000507001 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
SPCS3-202ENST00000507001 OSBPP22059 807 aa11.6□□□□□ -0.55
SPCS3-202ENST00000507001 PPP4CP60510 307 aa11.6□□□□□ -0.55
SPCS3-202ENST00000507001 TATDN2Q93075 761 aa11.59□□□□□ -0.55
SPCS3-202ENST00000507001 SAMD7Q7Z3H4 446 aa11.58□□□□□ -0.56
SPCS3-202ENST00000507001 SMAPO00193 183 aa11.56□□□□□ -0.56
SPCS3-202ENST00000507001 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
SPCS3-202ENST00000507001 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
SPCS3-202ENST00000507001 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
SPCS3-202ENST00000507001 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
SPCS3-202ENST00000507001 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
SPCS3-202ENST00000507001 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
SPCS3-202ENST00000507001 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
SPCS3-202ENST00000507001 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
SPCS3-202ENST00000507001 IL21Q9HBE4 155 aa11.5□□□□□ -0.57
SPCS3-202ENST00000507001 LAPTM4AQ15012 233 aa11.49□□□□□ -0.57
SPCS3-202ENST00000507001 MTRQ99707 1265 aa11.49□□□□□ -0.57
SPCS3-202ENST00000507001 NPDC1Q9NQX5 325 aaPredicted RBP11.49□□□□□ -0.57
SPCS3-202ENST00000507001 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
SPCS3-202ENST00000507001 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
SPCS3-202ENST00000507001 APLP1P51693 650 aa11.43□□□□□ -0.58
SPCS3-202ENST00000507001 Q6ZNB5 142 aa11.43□□□□□ -0.58
SPCS3-202ENST00000507001 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
SPCS3-202ENST00000507001 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
SPCS3-202ENST00000507001 RNF40O75150 1001 aa11.41□□□□□ -0.58
SPCS3-202ENST00000507001 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
SPCS3-202ENST00000507001 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
SPCS3-202ENST00000507001 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
SPCS3-202ENST00000507001 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
SPCS3-202ENST00000507001 EYA1Q99502 592 aa11.4□□□□□ -0.58
SPCS3-202ENST00000507001 SLC4A3P48751 1232 aa11.39□□□□□ -0.59
SPCS3-202ENST00000507001 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
SPCS3-202ENST00000507001 PRR14Q9BWN1 585 aa11.38□□□□□ -0.59
SPCS3-202ENST00000507001 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
SPCS3-202ENST00000507001 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
SPCS3-202ENST00000507001 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
SPCS3-202ENST00000507001 KCNV2Q8TDN2 545 aa11.35□□□□□ -0.59
SPCS3-202ENST00000507001 GFRA3O60609 400 aa11.34□□□□□ -0.59
SPCS3-202ENST00000507001 MLLT3P42568 568 aaPredicted RBP11.34□□□□□ -0.59
SPCS3-202ENST00000507001 PTGDRQ13258 359 aa11.34□□□□□ -0.59
SPCS3-202ENST00000507001 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
SPCS3-202ENST00000507001 GGCXP38435 758 aa11.33□□□□□ -0.6
SPCS3-202ENST00000507001 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
SPCS3-202ENST00000507001 DNAJB2P25686 324 aa11.31□□□□□ -0.6
SPCS3-202ENST00000507001 ZPR1O75312 459 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms