RNA–Protein interactions for RNA: ENST00000506312.3

RACK1-213, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-213ENST00000506312 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
RACK1-213ENST00000506312 A2MP01023 1474 aa13.49□□□□□ -0.25
RACK1-213ENST00000506312 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
RACK1-213ENST00000506312 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
RACK1-213ENST00000506312 RXRBP28702 533 aa13.48□□□□□ -0.25
RACK1-213ENST00000506312 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
RACK1-213ENST00000506312 DEPDC5O75140 1603 aa13.48□□□□□ -0.25
RACK1-213ENST00000506312 PREX2Q70Z35 1606 aa13.48□□□□□ -0.25
RACK1-213ENST00000506312 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
RACK1-213ENST00000506312 LRP6O75581 1613 aa13.46□□□□□ -0.25
RACK1-213ENST00000506312 SETBP1Q9Y6X0 1596 aa13.46□□□□□ -0.25
RACK1-213ENST00000506312 ATP7AQ04656 1500 aa13.46□□□□□ -0.25
RACK1-213ENST00000506312 SYCP2Q9BX26 1530 aa13.46□□□□□ -0.25
RACK1-213ENST00000506312 JCADQ9P266 1359 aa13.45□□□□□ -0.26
RACK1-213ENST00000506312 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.262e-9■■■□□ 17.5
RACK1-213ENST00000506312 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
RACK1-213ENST00000506312 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
RACK1-213ENST00000506312 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
RACK1-213ENST00000506312 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
RACK1-213ENST00000506312 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
RACK1-213ENST00000506312 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
RACK1-213ENST00000506312 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
RACK1-213ENST00000506312 PHLPP1O60346 1717 aa13.42□□□□□ -0.26
RACK1-213ENST00000506312 TMEM94Q12767 1356 aa13.41□□□□□ -0.26
RACK1-213ENST00000506312 PZPP20742 1482 aa13.41□□□□□ -0.26
RACK1-213ENST00000506312 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
RACK1-213ENST00000506312 MIA2Q96PC5 1412 aa13.4□□□□□ -0.26
RACK1-213ENST00000506312 INO80Q9ULG1 1556 aaPredicted RBP13.4□□□□□ -0.26
RACK1-213ENST00000506312 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
RACK1-213ENST00000506312 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
RACK1-213ENST00000506312 RGS12O14924 1447 aa13.38□□□□□ -0.27
RACK1-213ENST00000506312 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
RACK1-213ENST00000506312 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
RACK1-213ENST00000506312 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
RACK1-213ENST00000506312 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
RACK1-213ENST00000506312 FOXD1Q16676 465 aa13.35□□□□□ -0.27
RACK1-213ENST00000506312 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
RACK1-213ENST00000506312 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
RACK1-213ENST00000506312 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
RACK1-213ENST00000506312 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
RACK1-213ENST00000506312 SCAF11Q99590 1463 aaKnown RBP13.35□□□□□ -0.27
RACK1-213ENST00000506312 KIF3BO15066 747 aa13.34□□□□□ -0.27
RACK1-213ENST00000506312 PROSER2Q86WR7 435 aaPredicted RBP13.34□□□□□ -0.27
RACK1-213ENST00000506312 AFF2P51816 1311 aa13.34□□□□□ -0.27
RACK1-213ENST00000506312 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
RACK1-213ENST00000506312 ADGBQ8N7X0 1667 aa13.33□□□□□ -0.28
RACK1-213ENST00000506312 MAP3K1Q13233 1512 aa13.33□□□□□ -0.28
RACK1-213ENST00000506312 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.28
RACK1-213ENST00000506312 LTKP29376 864 aa13.32□□□□□ -0.28
RACK1-213ENST00000506312 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
RACK1-213ENST00000506312 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
RACK1-213ENST00000506312 MSH6P52701 1360 aa13.3□□□□□ -0.28
RACK1-213ENST00000506312 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
RACK1-213ENST00000506312 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
RACK1-213ENST00000506312 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
RACK1-213ENST00000506312 FGD6Q6ZV73 1430 aa13.27□□□□□ -0.29
RACK1-213ENST00000506312 DHX29Q7Z478 1369 aaKnown RBP13.26□□□□□ -0.29
RACK1-213ENST00000506312 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
RACK1-213ENST00000506312 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
RACK1-213ENST00000506312 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
RACK1-213ENST00000506312 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
RACK1-213ENST00000506312 EID1Q9Y6B2 187 aa13.25□□□□□ -0.29
RACK1-213ENST00000506312 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
RACK1-213ENST00000506312 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
RACK1-213ENST00000506312 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
RACK1-213ENST00000506312 PLEKHH2Q8IVE3 1493 aa13.24□□□□□ -0.29
RACK1-213ENST00000506312 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
RACK1-213ENST00000506312 KCNA6P17658 529 aa13.24□□□□□ -0.29
RACK1-213ENST00000506312 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
RACK1-213ENST00000506312 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
RACK1-213ENST00000506312 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
RACK1-213ENST00000506312 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
RACK1-213ENST00000506312 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
RACK1-213ENST00000506312 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
RACK1-213ENST00000506312 C14orf37Q86TY3 774 aa13.21□□□□□ -0.29
RACK1-213ENST00000506312 ARHGAP23Q9P227 1491 aa13.21□□□□□ -0.3
RACK1-213ENST00000506312 SLIT1O75093 1534 aa13.19□□□□□ -0.3
RACK1-213ENST00000506312 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
RACK1-213ENST00000506312 BCANQ96GW7 911 aa13.19□□□□□ -0.3
RACK1-213ENST00000506312 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
RACK1-213ENST00000506312 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
RACK1-213ENST00000506312 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
RACK1-213ENST00000506312 YY1P25490 414 aa13.18□□□□□ -0.3
RACK1-213ENST00000506312 LRP5O75197 1615 aa13.17□□□□□ -0.3
RACK1-213ENST00000506312 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
RACK1-213ENST00000506312 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
RACK1-213ENST00000506312 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
RACK1-213ENST00000506312 KDM5AP29375 1690 aaKnown RBP13.16□□□□□ -0.3
RACK1-213ENST00000506312 ABCC3O15438 1527 aa13.16□□□□□ -0.3
RACK1-213ENST00000506312 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
RACK1-213ENST00000506312 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
RACK1-213ENST00000506312 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
RACK1-213ENST00000506312 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
RACK1-213ENST00000506312 TMEM2Q9UHN6 1383 aa13.14□□□□□ -0.31
RACK1-213ENST00000506312 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
RACK1-213ENST00000506312 EP400Q96L91 3159 aa13.13□□□□□ -0.31
RACK1-213ENST00000506312 NWD1Q149M9 1564 aa13.13□□□□□ -0.31
RACK1-213ENST00000506312 DEFB132Q7Z7B7 95 aa13.13□□□□□ -0.31
RACK1-213ENST00000506312 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
RACK1-213ENST00000506312 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms