RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 GOLGA2Q08379 1002 aa20.42■□□□□ 0.86
HMGXB3-202ENST00000503427 MSNP26038 577 aaKnown RBP20.42■□□□□ 0.86
HMGXB3-202ENST00000503427 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
HMGXB3-202ENST00000503427 NRDCO43847 1150 aa20.41■□□□□ 0.86
HMGXB3-202ENST00000503427 NESP48681 1621 aa20.41■□□□□ 0.86
HMGXB3-202ENST00000503427 GBP4Q96PP9 640 aa20.41■□□□□ 0.86
HMGXB3-202ENST00000503427 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
HMGXB3-202ENST00000503427 NCOA2Q15596 1464 aa20.4■□□□□ 0.86
HMGXB3-202ENST00000503427 STAC3Q96MF2 364 aa20.4■□□□□ 0.86
HMGXB3-202ENST00000503427 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
HMGXB3-202ENST00000503427 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
HMGXB3-202ENST00000503427 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
HMGXB3-202ENST00000503427 USP47Q96K76 1375 aa20.38■□□□□ 0.85
HMGXB3-202ENST00000503427 MYBBP1AQ9BQG0 1328 aaKnown RBP20.38■□□□□ 0.85
HMGXB3-202ENST00000503427 ITPRIPQ8IWB1 547 aa20.38■□□□□ 0.85
HMGXB3-202ENST00000503427 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
HMGXB3-202ENST00000503427 NGDNQ8NEJ9 315 aaKnown RBP20.37■□□□□ 0.85
HMGXB3-202ENST00000503427 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
HMGXB3-202ENST00000503427 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
HMGXB3-202ENST00000503427 NPHP1O15259 732 aa20.36■□□□□ 0.85
HMGXB3-202ENST00000503427 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
HMGXB3-202ENST00000503427 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
HMGXB3-202ENST00000503427 SLKQ9H2G2 1235 aaPredicted RBP20.35■□□□□ 0.85
HMGXB3-202ENST00000503427 PANK3Q9H999 370 aa20.35■□□□□ 0.85
HMGXB3-202ENST00000503427 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
HMGXB3-202ENST00000503427 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
HMGXB3-202ENST00000503427 ANKRD50Q9ULJ7 1429 aa20.34■□□□□ 0.85
HMGXB3-202ENST00000503427 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
HMGXB3-202ENST00000503427 CSB-PGBD3P0DP91 1061 aa20.33■□□□□ 0.85
HMGXB3-202ENST00000503427 NAP1L2Q9ULW6 460 aaPredicted RBP20.33■□□□□ 0.84
HMGXB3-202ENST00000503427 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
HMGXB3-202ENST00000503427 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
HMGXB3-202ENST00000503427 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
HMGXB3-202ENST00000503427 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
HMGXB3-202ENST00000503427 SMC4Q9NTJ3 1288 aa20.3■□□□□ 0.84
HMGXB3-202ENST00000503427 CGNL1Q0VF96 1302 aa20.3■□□□□ 0.84
HMGXB3-202ENST00000503427 KIAA1211Q6ZU35 1233 aa20.29■□□□□ 0.84
HMGXB3-202ENST00000503427 APBB1O00213 710 aa20.29■□□□□ 0.84
HMGXB3-202ENST00000503427 STK31Q9BXU1 1019 aa20.29■□□□□ 0.84
HMGXB3-202ENST00000503427 ZBED9Q6R2W3 1325 aa20.28■□□□□ 0.84
HMGXB3-202ENST00000503427 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
HMGXB3-202ENST00000503427 AMPHP49418 695 aa20.27■□□□□ 0.84
HMGXB3-202ENST00000503427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.27■□□□□ 0.83
HMGXB3-202ENST00000503427 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
HMGXB3-202ENST00000503427 CCDC146Q8IYE0 955 aa20.26■□□□□ 0.83
HMGXB3-202ENST00000503427 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
HMGXB3-202ENST00000503427 TAOK2Q9UL54 1235 aa20.26■□□□□ 0.83
HMGXB3-202ENST00000503427 HDAC5Q9UQL6 1122 aa20.25■□□□□ 0.83
HMGXB3-202ENST00000503427 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
HMGXB3-202ENST00000503427 EHBP1L1Q8N3D4 1523 aa20.24■□□□□ 0.83
HMGXB3-202ENST00000503427 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
HMGXB3-202ENST00000503427 GOLGA6L3A6NEY3 463 aa20.23■□□□□ 0.83
HMGXB3-202ENST00000503427 DRC7Q8IY82 874 aa20.23■□□□□ 0.83
HMGXB3-202ENST00000503427 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
HMGXB3-202ENST00000503427 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
HMGXB3-202ENST00000503427 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.22■□□□□ 0.83
HMGXB3-202ENST00000503427 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
HMGXB3-202ENST00000503427 CLUAP1Q96AJ1 413 aa20.22■□□□□ 0.83
HMGXB3-202ENST00000503427 SYAP1Q96A49 352 aaPredicted RBP20.22■□□□□ 0.83
HMGXB3-202ENST00000503427 COG3Q96JB2 828 aa20.21■□□□□ 0.83
HMGXB3-202ENST00000503427 HMMRO75330 724 aa20.21■□□□□ 0.83
HMGXB3-202ENST00000503427 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
HMGXB3-202ENST00000503427 NUTM2FA1L443 756 aa20.19■□□□□ 0.82
HMGXB3-202ENST00000503427 KIAA2012Q0VF49 1180 aa20.19■□□□□ 0.82
HMGXB3-202ENST00000503427 RRP1P56182 461 aaKnown RBP20.19■□□□□ 0.82
HMGXB3-202ENST00000503427 PLEKHH2Q8IVE3 1493 aa20.19■□□□□ 0.82
HMGXB3-202ENST00000503427 TROQ12816 1431 aaPredicted RBP20.19■□□□□ 0.82
HMGXB3-202ENST00000503427 MINK1Q8N4C8 1332 aaPredicted RBP20.18■□□□□ 0.82
HMGXB3-202ENST00000503427 PDE4AP27815 886 aa20.18■□□□□ 0.82
HMGXB3-202ENST00000503427 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
HMGXB3-202ENST00000503427 HECW1Q76N89 1606 aa20.17■□□□□ 0.82
HMGXB3-202ENST00000503427 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
HMGXB3-202ENST00000503427 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
HMGXB3-202ENST00000503427 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
HMGXB3-202ENST00000503427 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
HMGXB3-202ENST00000503427 AFAP1Q8N556 730 aa20.15■□□□□ 0.82
HMGXB3-202ENST00000503427 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
HMGXB3-202ENST00000503427 FANCIQ9NVI1 1328 aa20.15■□□□□ 0.82
HMGXB3-202ENST00000503427 E9PSI1 815 aa20.14■□□□□ 0.81
HMGXB3-202ENST00000503427 EXOC6Q8TAG9 804 aa20.14■□□□□ 0.81
HMGXB3-202ENST00000503427 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
HMGXB3-202ENST00000503427 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
HMGXB3-202ENST00000503427 LTV1Q96GA3 475 aaPredicted RBP20.12■□□□□ 0.81
HMGXB3-202ENST00000503427 HFM1A2PYH4 1435 aa20.12■□□□□ 0.81
HMGXB3-202ENST00000503427 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
HMGXB3-202ENST00000503427 C9orf84Q5VXU9 1444 aa20.11■□□□□ 0.81
HMGXB3-202ENST00000503427 GNL2Q13823 731 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-202ENST00000503427 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
HMGXB3-202ENST00000503427 GPATCH3Q96I76 525 aa20.09■□□□□ 0.81
HMGXB3-202ENST00000503427 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
HMGXB3-202ENST00000503427 PLIN1O60240 522 aa20.09■□□□□ 0.81
HMGXB3-202ENST00000503427 CRBNQ96SW2 442 aa20.08■□□□□ 0.81
HMGXB3-202ENST00000503427 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
HMGXB3-202ENST00000503427 DDX11L8A8MPP1 907 aa20.08■□□□□ 0.8
HMGXB3-202ENST00000503427 ST18O60284 1047 aa20.08■□□□□ 0.8
HMGXB3-202ENST00000503427 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
HMGXB3-202ENST00000503427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
HMGXB3-202ENST00000503427 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
HMGXB3-202ENST00000503427 SLC4A10Q6U841 1118 aa20.06■□□□□ 0.8
HMGXB3-202ENST00000503427 CNTLNQ9NXG0 1405 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms