RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
PDCD4-211ENST00000498367 E9PSI1 815 aa10.66□□□□□ -0.7
PDCD4-211ENST00000498367 TMCO4Q5TGY1 634 aa10.66□□□□□ -0.7
PDCD4-211ENST00000498367 APBB1O00213 710 aa10.65□□□□□ -0.7
PDCD4-211ENST00000498367 POTEEQ6S8J3 1075 aa10.65□□□□□ -0.7
PDCD4-211ENST00000498367 LHX6Q9UPM6 363 aa10.65□□□□□ -0.7
PDCD4-211ENST00000498367 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
PDCD4-211ENST00000498367 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
PDCD4-211ENST00000498367 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
PDCD4-211ENST00000498367 PBX2P40425 430 aa10.63□□□□□ -0.71
PDCD4-211ENST00000498367 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
PDCD4-211ENST00000498367 TRAIPQ9BWF2 469 aa10.63□□□□□ -0.71
PDCD4-211ENST00000498367 MTMR7Q9Y216 660 aa10.63□□□□□ -0.71
PDCD4-211ENST00000498367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDCD4-211ENST00000498367 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
PDCD4-211ENST00000498367 FOXK1P85037 733 aa10.61□□□□□ -0.71
PDCD4-211ENST00000498367 CLSTN1O94985 981 aa10.6□□□□□ -0.71
PDCD4-211ENST00000498367 ANKRD13DQ6ZTN6 518 aa10.6□□□□□ -0.71
PDCD4-211ENST00000498367 USP35Q9P2H5 1018 aa10.6□□□□□ -0.71
PDCD4-211ENST00000498367 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
PDCD4-211ENST00000498367 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
PDCD4-211ENST00000498367 DSG2Q14126 1118 aa10.56□□□□□ -0.72
PDCD4-211ENST00000498367 PLPP6Q8IY26 295 aa10.56□□□□□ -0.72
PDCD4-211ENST00000498367 PSMD1Q99460 953 aa10.56□□□□□ -0.72
PDCD4-211ENST00000498367 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
PDCD4-211ENST00000498367 AXIN2Q9Y2T1 843 aa10.55□□□□□ -0.72
PDCD4-211ENST00000498367 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
PDCD4-211ENST00000498367 ARID3CA6NKF2 412 aa10.54□□□□□ -0.72
PDCD4-211ENST00000498367 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
PDCD4-211ENST00000498367 TICAM2Q86XR7 235 aa10.52□□□□□ -0.73
PDCD4-211ENST00000498367 CANXP27824 592 aaKnown RBP10.51□□□□□ -0.73
PDCD4-211ENST00000498367 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
PDCD4-211ENST00000498367 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.51□□□□□ -0.73
PDCD4-211ENST00000498367 ARHGAP33O14559 1287 aa10.5□□□□□ -0.73
PDCD4-211ENST00000498367 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
PDCD4-211ENST00000498367 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
PDCD4-211ENST00000498367 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-211ENST00000498367 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-211ENST00000498367 CC2D2BQ6DHV5 1058 aa10.48□□□□□ -0.73
PDCD4-211ENST00000498367 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-211ENST00000498367 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
PDCD4-211ENST00000498367 RYDENQ9NUL5 291 aaKnown RBP10.47□□□□□ -0.73
PDCD4-211ENST00000498367 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
PDCD4-211ENST00000498367 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
PDCD4-211ENST00000498367 TK2O00142 265 aa10.45□□□□□ -0.74
PDCD4-211ENST00000498367 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
PDCD4-211ENST00000498367 PKNOX2Q96KN3 472 aa10.45□□□□□ -0.74
PDCD4-211ENST00000498367 HRO43593 1189 aa10.44□□□□□ -0.74
PDCD4-211ENST00000498367 TBC1D12O60347 775 aa10.44□□□□□ -0.74
PDCD4-211ENST00000498367 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
PDCD4-211ENST00000498367 ZC3H15Q8WU90 426 aaKnown RBP10.44□□□□□ -0.74
PDCD4-211ENST00000498367 NCKAP5LQ9HCH0 1330 aa10.43□□□□□ -0.74
PDCD4-211ENST00000498367 PSEN2P49810 448 aa10.43□□□□□ -0.74
PDCD4-211ENST00000498367 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
PDCD4-211ENST00000498367 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
PDCD4-211ENST00000498367 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
PDCD4-211ENST00000498367 WDR70Q9NW82 654 aa10.42□□□□□ -0.74
PDCD4-211ENST00000498367 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
PDCD4-211ENST00000498367 FLIIQ13045 1269 aa10.41□□□□□ -0.74
PDCD4-211ENST00000498367 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
PDCD4-211ENST00000498367 ZNF592Q92610 1267 aa10.4□□□□□ -0.74
PDCD4-211ENST00000498367 FGD1P98174 961 aa10.38□□□□□ -0.75
PDCD4-211ENST00000498367 CCDC125Q86Z20 511 aa10.38□□□□□ -0.75
PDCD4-211ENST00000498367 CERS3Q8IU89 383 aa10.37□□□□□ -0.75
PDCD4-211ENST00000498367 CWC22Q9HCG8 908 aaKnown RBP10.37□□□□□ -0.75
PDCD4-211ENST00000498367 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
PDCD4-211ENST00000498367 UPF1Q92900 1129 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDCD4-211ENST00000498367 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
PDCD4-211ENST00000498367 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
PDCD4-211ENST00000498367 PDE4AP27815 886 aa10.34□□□□□ -0.75
PDCD4-211ENST00000498367 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
PDCD4-211ENST00000498367 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
PDCD4-211ENST00000498367 AMOTL2Q9Y2J4 779 aa10.34□□□□□ -0.75
PDCD4-211ENST00000498367 MFSD10Q14728 455 aa10.33□□□□□ -0.76
PDCD4-211ENST00000498367 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
PDCD4-211ENST00000498367 FOSBP53539 338 aa10.32□□□□□ -0.76
PDCD4-211ENST00000498367 SETQ01105 290 aaPredicted RBP10.32□□□□□ -0.76
PDCD4-211ENST00000498367 ZNF454Q8N9F8 522 aa10.31□□□□□ -0.76
PDCD4-211ENST00000498367 SLC4A5Q9BY07 1137 aa10.31□□□□□ -0.76
PDCD4-211ENST00000498367 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
PDCD4-211ENST00000498367 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
PDCD4-211ENST00000498367 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
PDCD4-211ENST00000498367 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
PDCD4-211ENST00000498367 A6NJR5 290 aa10.28□□□□□ -0.76
PDCD4-211ENST00000498367 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
PDCD4-211ENST00000498367 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
PDCD4-211ENST00000498367 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
PDCD4-211ENST00000498367 EVI5O60447 810 aa10.27□□□□□ -0.77
PDCD4-211ENST00000498367 KCNH8Q96L42 1107 aa10.27□□□□□ -0.77
PDCD4-211ENST00000498367 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
PDCD4-211ENST00000498367 TRAK2O60296 914 aa10.26□□□□□ -0.77
PDCD4-211ENST00000498367 NAP1L5Q96NT1 182 aaPredicted RBP10.26□□□□□ -0.77
PDCD4-211ENST00000498367 PTMSP20962 102 aa10.25□□□□□ -0.77
PDCD4-211ENST00000498367 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
PDCD4-211ENST00000498367 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
PDCD4-211ENST00000498367 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
PDCD4-211ENST00000498367 SERPINA10Q9UK55 444 aa10.25□□□□□ -0.77
PDCD4-211ENST00000498367 BRPF3Q9ULD4 1205 aa10.25□□□□□ -0.77
PDCD4-211ENST00000498367 CCDC97Q96F63 343 aaPredicted RBP10.24□□□□□ -0.77
PDCD4-211ENST00000498367 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms