RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PAK3O75914 559 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 OSBPP22059 807 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 MCM6Q14566 821 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 SH3D19Q5HYK7 790 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 TMEM121BQ9BXQ6 578 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 TOP2BQ02880 1626 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 APBB1O00213 710 aa4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 DSG2Q14126 1118 aa4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 NECTIN2Q92692 538 aa4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 CCDC9Q9Y3X0 531 aaKnown RBP4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 SNAPC4Q5SXM2 1469 aa4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 PDIA4P13667 645 aaKnown RBP4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 TIE1P35590 1138 aa4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 PCF11O94913 1555 aaKnown RBP4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 EIF4G3O43432 1585 aaKnown RBP4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 MED1Q15648 1581 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 ZBTB7CA1YPR0 619 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 FCHSD2O94868 740 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 PRKAR2AP13861 404 aaKnown RBP4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 CCDC82Q8N4S0 544 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 KCTD17Q8N5Z5 321 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 DCAF1Q9Y4B6 1507 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 DIP2BQ9P265 1576 aa4.28□□□□□ -1.72
CKS1BP2-201ENST00000497342 PTGDRQ13258 359 aa4.28□□□□□ -1.72
CKS1BP2-201ENST00000497342 AQRO60306 1485 aaKnown RBP eCLIP4.28□□□□□ -1.72
CKS1BP2-201ENST00000497342 SYNJ1O43426 1573 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 COL17A1Q9UMD9 1497 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 MS4A1P11836 297 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 HSPA2P54652 639 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 SKIV2LQ15477 1246 aaKnown RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 GIGYF2Q6Y7W6 1299 aaKnown RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 MICALL2Q8IY33 904 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 PCMTD1Q96MG8 357 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 TMEM106CQ9BVX2 250 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 SERPINA10Q9UK55 444 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 PTPRMP28827 1452 aa4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 ARID3CA6NKF2 412 aa4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 PROSER2Q86WR7 435 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 PDCD7Q8N8D1 485 aaKnown RBP4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 BANK1Q8NDB2 785 aa4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 SPDYE5A6NIY4 337 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 TSPOAP1O95153 1857 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 FECHP22830 423 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 TUSC1Q2TAM9 212 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 CHMP7Q8WUX9 453 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 CLUAP1Q96AJ1 413 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 REPIN1Q9BWE0 567 aaKnown RBP4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 ANO8Q9HCE9 1232 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 PLSCR2Q9NRY7 297 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 MAPKBP1O60336 1514 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 TTLL13PA6NNM8 815 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 CLCN1P35523 988 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 GOLGA2Q08379 1002 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 PLPP6Q8IY26 295 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 NPDC1Q9NQX5 325 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 PPP1R15AO75807 674 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 PRIM1P49642 420 aaKnown RBP4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 PPP2R2DQ66LE6 453 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 RGS22Q8NE09 1264 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 TMC2Q8TDI7 906 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 TRPC6Q9Y210 931 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 NUTM2FA1L443 756 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 SLC34A2O95436 690 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 CLCN6P51797 869 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 MS4A3Q96HJ5 214 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 ARID3AQ99856 593 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 GPCPD1Q9NPB8 672 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 RGS17Q9UGC6 210 aaPredicted RBP4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 IQSEC2Q5JU85 1478 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 C2orf72A6NCS6 295 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 IRX5P78411 483 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 MAP3K9P80192 1104 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 IER5LQ5T953 404 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PIP4P2Q8N4L2 257 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PTCD2Q8WV60 388 aaKnown RBP4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PHF12Q96QT6 1004 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 ZRANB1Q9UGI0 708 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 COG6Q9Y2V7 657 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PEG3Q9GZU2 1588 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 PATL2C9JE40 543 aaKnown RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 CD44P16070 742 aaKnown RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 HSPA1LP34931 641 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 GJA5P36382 358 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 PDE4CQ08493 712 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 TTLL12Q14166 644 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 TTC13Q8NBP0 860 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 EPAS1Q99814 870 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 BMP2KQ9NSY1 1161 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 FAM217BQ9NTX9 383 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 RBM27Q9P2N5 1060 aaKnown RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 GRXCR2A6NFK2 248 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 C19orf67A6NJJ6 358 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 TBC1D12O60347 775 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 EN1Q05925 392 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 DIXDC1Q155Q3 683 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 PHOX2BQ99453 314 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 LTBP4Q8N2S1 1624 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 CFTRP13569 1480 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms