RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PAK3O75914 559 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 OSBPP22059 807 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 MCM6Q14566 821 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 SH3D19Q5HYK7 790 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 TMEM121BQ9BXQ6 578 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 TOP2BQ02880 1626 aa4.32□□□□□ -1.72
CKS1BP2-201ENST00000497342 APBB1O00213 710 aa4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 DSG2Q14126 1118 aa4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 NECTIN2Q92692 538 aa4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 CCDC9Q9Y3X0 531 aaKnown RBP4.31□□□□□ -1.72
CKS1BP2-201ENST00000497342 SNAPC4Q5SXM2 1469 aa4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 PDIA4P13667 645 aaKnown RBP4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 TIE1P35590 1138 aa4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 PCF11O94913 1555 aaKnown RBP4.3□□□□□ -1.72
CKS1BP2-201ENST00000497342 EIF4G3O43432 1585 aaKnown RBP4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 MED1Q15648 1581 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 ZBTB7CA1YPR0 619 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 FCHSD2O94868 740 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 PRKAR2AP13861 404 aaKnown RBP4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 CCDC82Q8N4S0 544 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 KCTD17Q8N5Z5 321 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 DCAF1Q9Y4B6 1507 aa4.29□□□□□ -1.72
CKS1BP2-201ENST00000497342 DIP2BQ9P265 1576 aa4.28□□□□□ -1.72
CKS1BP2-201ENST00000497342 PTGDRQ13258 359 aa4.28□□□□□ -1.72
CKS1BP2-201ENST00000497342 AQRO60306 1485 aaKnown RBP eCLIP4.28□□□□□ -1.72
CKS1BP2-201ENST00000497342 SYNJ1O43426 1573 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 COL17A1Q9UMD9 1497 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 MS4A1P11836 297 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 HSPA2P54652 639 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 SKIV2LQ15477 1246 aaKnown RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 GIGYF2Q6Y7W6 1299 aaKnown RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 MICALL2Q8IY33 904 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 PCMTD1Q96MG8 357 aaPredicted RBP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 TMEM106CQ9BVX2 250 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 SERPINA10Q9UK55 444 aa4.27□□□□□ -1.73
CKS1BP2-201ENST00000497342 PTPRMP28827 1452 aa4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 ARID3CA6NKF2 412 aa4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 PROSER2Q86WR7 435 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 PDCD7Q8N8D1 485 aaKnown RBP4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 BANK1Q8NDB2 785 aa4.26□□□□□ -1.73
CKS1BP2-201ENST00000497342 SPDYE5A6NIY4 337 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 TSPOAP1O95153 1857 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 FECHP22830 423 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 TUSC1Q2TAM9 212 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 CHMP7Q8WUX9 453 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 CLUAP1Q96AJ1 413 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 REPIN1Q9BWE0 567 aaKnown RBP4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 ANO8Q9HCE9 1232 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 PLSCR2Q9NRY7 297 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 MAPKBP1O60336 1514 aa4.25□□□□□ -1.73
CKS1BP2-201ENST00000497342 TTLL13PA6NNM8 815 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 CLCN1P35523 988 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 GOLGA2Q08379 1002 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 PLPP6Q8IY26 295 aa4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 NPDC1Q9NQX5 325 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP2-201ENST00000497342 PPP1R15AO75807 674 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 PRIM1P49642 420 aaKnown RBP4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 PPP2R2DQ66LE6 453 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 RGS22Q8NE09 1264 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 TMC2Q8TDI7 906 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 TRPC6Q9Y210 931 aa4.23□□□□□ -1.73
CKS1BP2-201ENST00000497342 NUTM2FA1L443 756 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 SLC34A2O95436 690 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 CLCN6P51797 869 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 MS4A3Q96HJ5 214 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 ARID3AQ99856 593 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 GPCPD1Q9NPB8 672 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 RGS17Q9UGC6 210 aaPredicted RBP4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 IQSEC2Q5JU85 1478 aa4.22□□□□□ -1.73
CKS1BP2-201ENST00000497342 C2orf72A6NCS6 295 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 IRX5P78411 483 aaPredicted RBP4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 MAP3K9P80192 1104 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 IER5LQ5T953 404 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PIP4P2Q8N4L2 257 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PTCD2Q8WV60 388 aaKnown RBP4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PHF12Q96QT6 1004 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 ZRANB1Q9UGI0 708 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 COG6Q9Y2V7 657 aa4.21□□□□□ -1.74
CKS1BP2-201ENST00000497342 PEG3Q9GZU2 1588 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 PATL2C9JE40 543 aaKnown RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 CD44P16070 742 aaKnown RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 HSPA1LP34931 641 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 GJA5P36382 358 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 PDE4CQ08493 712 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 TTLL12Q14166 644 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 TTC13Q8NBP0 860 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 EPAS1Q99814 870 aa4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 BMP2KQ9NSY1 1161 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 FAM217BQ9NTX9 383 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 RBM27Q9P2N5 1060 aaKnown RBP4.2□□□□□ -1.74
CKS1BP2-201ENST00000497342 GRXCR2A6NFK2 248 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 C19orf67A6NJJ6 358 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 TBC1D12O60347 775 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 EN1Q05925 392 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 DIXDC1Q155Q3 683 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 PHOX2BQ99453 314 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 LTBP4Q8N2S1 1624 aa4.19□□□□□ -1.74
CKS1BP2-201ENST00000497342 CFTRP13569 1480 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms