RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 EPAS1Q99814 870 aa10.58□□□□□ -0.72
CD46-218ENST00000496723 RABGEF1Q9UJ41 708 aa10.58□□□□□ -0.72
CD46-218ENST00000496723 DPYSL4O14531 572 aa10.55□□□□□ -0.72
CD46-218ENST00000496723 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
CD46-218ENST00000496723 SPRYD3Q8NCJ5 442 aa10.54□□□□□ -0.72
CD46-218ENST00000496723 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
CD46-218ENST00000496723 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
CD46-218ENST00000496723 COL9A1P20849 921 aa10.53□□□□□ -0.72
CD46-218ENST00000496723 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
CD46-218ENST00000496723 PROX2Q3B8N5 592 aa10.51□□□□□ -0.73
CD46-218ENST00000496723 C6orf132Q5T0Z8 1188 aa10.51□□□□□ -0.73
CD46-218ENST00000496723 ANKK1Q8NFD2 765 aa10.5□□□□□ -0.73
CD46-218ENST00000496723 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
CD46-218ENST00000496723 PDIA6Q15084 440 aa10.47□□□□□ -0.73
CD46-218ENST00000496723 KIAA1468Q9P260 1216 aa10.47□□□□□ -0.73
CD46-218ENST00000496723 RGS20O76081 388 aa10.46□□□□□ -0.73
CD46-218ENST00000496723 DDX12PQ92771 950 aa10.46□□□□□ -0.73
CD46-218ENST00000496723 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
CD46-218ENST00000496723 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
CD46-218ENST00000496723 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
CD46-218ENST00000496723 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
CD46-218ENST00000496723 ZFRQ96KR1 1074 aaKnown RBP10.43□□□□□ -0.74
CD46-218ENST00000496723 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
CD46-218ENST00000496723 EN1Q05925 392 aaPredicted RBP10.42□□□□□ -0.74
CD46-218ENST00000496723 E2F4Q16254 413 aa10.42□□□□□ -0.74
CD46-218ENST00000496723 NBR1Q14596 966 aa10.41□□□□□ -0.74
CD46-218ENST00000496723 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
CD46-218ENST00000496723 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
CD46-218ENST00000496723 A0A0G2JS52 829 aa10.39□□□□□ -0.75
CD46-218ENST00000496723 MAP3K7O43318 606 aa10.39□□□□□ -0.75
CD46-218ENST00000496723 BCAMP50895 628 aa10.39□□□□□ -0.75
CD46-218ENST00000496723 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
CD46-218ENST00000496723 ITGBL1O95965 494 aaPredicted RBP10.38□□□□□ -0.75
CD46-218ENST00000496723 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
CD46-218ENST00000496723 CERKQ8TCT0 537 aa10.37□□□□□ -0.75
CD46-218ENST00000496723 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
CD46-218ENST00000496723 SEPT9Q9UHD8 586 aaPredicted RBP10.37□□□□□ -0.75
CD46-218ENST00000496723 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
CD46-218ENST00000496723 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
CD46-218ENST00000496723 WBP1LQ9NX94 342 aa10.34□□□□□ -0.75
CD46-218ENST00000496723 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.34□□□□□ -0.75
CD46-218ENST00000496723 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
CD46-218ENST00000496723 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
CD46-218ENST00000496723 PRSS12P56730 875 aa10.31□□□□□ -0.76
CD46-218ENST00000496723 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
CD46-218ENST00000496723 GRXCR2A6NFK2 248 aa10.3□□□□□ -0.76
CD46-218ENST00000496723 KCNC4Q03721 635 aa10.29□□□□□ -0.76
CD46-218ENST00000496723 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
CD46-218ENST00000496723 RBM27Q9P2N5 1060 aaKnown RBP10.27□□□□□ -0.77
CD46-218ENST00000496723 OSBPP22059 807 aa10.26□□□□□ -0.77
CD46-218ENST00000496723 NBPF26B4DH59 902 aa10.25□□□□□ -0.77
CD46-218ENST00000496723 PRIM1P49642 420 aaKnown RBP10.25□□□□□ -0.77
CD46-218ENST00000496723 PPP4CP60510 307 aa10.25□□□□□ -0.77
CD46-218ENST00000496723 IRX2Q9BZI1 471 aaPredicted RBP10.25□□□□□ -0.77
CD46-218ENST00000496723 TATDN2Q93075 761 aa10.24□□□□□ -0.77
CD46-218ENST00000496723 FAM198AQ9UFP1 575 aa10.23□□□□□ -0.77
CD46-218ENST00000496723 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
CD46-218ENST00000496723 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.77
CD46-218ENST00000496723 PNMA3Q9UL41 463 aa10.21□□□□□ -0.77
CD46-218ENST00000496723 SMAPO00193 183 aa10.2□□□□□ -0.78
CD46-218ENST00000496723 ARHGEF1Q92888 912 aaKnown RBP10.19□□□□□ -0.78
CD46-218ENST00000496723 TTC13Q8NBP0 860 aa10.18□□□□□ -0.78
CD46-218ENST00000496723 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
CD46-218ENST00000496723 C3orf80F5H4A9 247 aa10.17□□□□□ -0.78
CD46-218ENST00000496723 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
CD46-218ENST00000496723 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
CD46-218ENST00000496723 TJAP1Q5JTD0 557 aa10.16□□□□□ -0.78
CD46-218ENST00000496723 NPDC1Q9NQX5 325 aaPredicted RBP10.16□□□□□ -0.78
CD46-218ENST00000496723 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
CD46-218ENST00000496723 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
CD46-218ENST00000496723 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
CD46-218ENST00000496723 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
CD46-218ENST00000496723 MTRQ99707 1265 aa10.11□□□□□ -0.79
CD46-218ENST00000496723 SLF2Q8IX21 1173 aa10.1□□□□□ -0.79
CD46-218ENST00000496723 RNF40O75150 1001 aa10.09□□□□□ -0.79
CD46-218ENST00000496723 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
CD46-218ENST00000496723 EYA1Q99502 592 aa10.08□□□□□ -0.8
CD46-218ENST00000496723 APLP1P51693 650 aa10.07□□□□□ -0.8
CD46-218ENST00000496723 LAPTM4AQ15012 233 aa10.07□□□□□ -0.8
CD46-218ENST00000496723 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
CD46-218ENST00000496723 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
CD46-218ENST00000496723 PTGDRQ13258 359 aa10.05□□□□□ -0.8
CD46-218ENST00000496723 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
CD46-218ENST00000496723 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
CD46-218ENST00000496723 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
CD46-218ENST00000496723 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
CD46-218ENST00000496723 Q6ZNB5 142 aa10.02□□□□□ -0.81
CD46-218ENST00000496723 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
CD46-218ENST00000496723 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
CD46-218ENST00000496723 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
CD46-218ENST00000496723 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.01□□□□□ -0.81
CD46-218ENST00000496723 DNAJB2P25686 324 aa10□□□□□ -0.81
CD46-218ENST00000496723 GGCXP38435 758 aa10□□□□□ -0.81
CD46-218ENST00000496723 PRKD2Q9BZL6 878 aa10□□□□□ -0.81
CD46-218ENST00000496723 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
CD46-218ENST00000496723 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
CD46-218ENST00000496723 ADGRG1Q9Y653 693 aa9.98□□□□□ -0.81
CD46-218ENST00000496723 GFRA3O60609 400 aa9.97□□□□□ -0.81
CD46-218ENST00000496723 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
CD46-218ENST00000496723 ZPR1O75312 459 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms