RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 PROX2Q3B8N5 592 aa12.77□□□□□ -0.37
SRRM1-219ENST00000495561 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
SRRM1-219ENST00000495561 EPAS1Q99814 870 aa12.77□□□□□ -0.37
SRRM1-219ENST00000495561 NBPF3Q9H094 633 aa12.77□□□□□ -0.37
SRRM1-219ENST00000495561 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
SRRM1-219ENST00000495561 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
SRRM1-219ENST00000495561 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
SRRM1-219ENST00000495561 WNT2BQ93097 391 aa12.75□□□□□ -0.37
SRRM1-219ENST00000495561 DDX12PQ92771 950 aa12.74□□□□□ -0.37
SRRM1-219ENST00000495561 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
SRRM1-219ENST00000495561 C6orf132Q5T0Z8 1188 aa12.73□□□□□ -0.37
SRRM1-219ENST00000495561 PDIA6Q15084 440 aa12.71□□□□□ -0.37
SRRM1-219ENST00000495561 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
SRRM1-219ENST00000495561 E2F4Q16254 413 aa12.68□□□□□ -0.38
SRRM1-219ENST00000495561 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
SRRM1-219ENST00000495561 KIAA1468Q9P260 1216 aa12.67□□□□□ -0.38
SRRM1-219ENST00000495561 NBR1Q14596 966 aa12.66□□□□□ -0.38
SRRM1-219ENST00000495561 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-219ENST00000495561 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
SRRM1-219ENST00000495561 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
SRRM1-219ENST00000495561 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
SRRM1-219ENST00000495561 LAPTM4BQ86VI4 370 aa12.63□□□□□ -0.39
SRRM1-219ENST00000495561 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
SRRM1-219ENST00000495561 ARIH1Q9Y4X5 557 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-219ENST00000495561 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
SRRM1-219ENST00000495561 MAP3K7O43318 606 aa12.61□□□□□ -0.39
SRRM1-219ENST00000495561 SEPT9Q9UHD8 586 aaPredicted RBP12.61□□□□□ -0.39
SRRM1-219ENST00000495561 BCAMP50895 628 aa12.59□□□□□ -0.39
SRRM1-219ENST00000495561 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
SRRM1-219ENST00000495561 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
SRRM1-219ENST00000495561 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
SRRM1-219ENST00000495561 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
SRRM1-219ENST00000495561 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
SRRM1-219ENST00000495561 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
SRRM1-219ENST00000495561 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
SRRM1-219ENST00000495561 PACS2Q86VP3 889 aa12.51□□□□□ -0.41
SRRM1-219ENST00000495561 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
SRRM1-219ENST00000495561 OSBPP22059 807 aa12.49□□□□□ -0.41
SRRM1-219ENST00000495561 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
SRRM1-219ENST00000495561 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
SRRM1-219ENST00000495561 A0A0G2JS52 829 aa12.48□□□□□ -0.41
SRRM1-219ENST00000495561 PRSS12P56730 875 aa12.48□□□□□ -0.41
SRRM1-219ENST00000495561 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
SRRM1-219ENST00000495561 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-219ENST00000495561 NYAP1Q6ZVC0 841 aa12.47□□□□□ -0.41
SRRM1-219ENST00000495561 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
SRRM1-219ENST00000495561 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
SRRM1-219ENST00000495561 CDHR5Q9HBB8 845 aa12.47□□□□□ -0.41
SRRM1-219ENST00000495561 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
SRRM1-219ENST00000495561 SMAPO00193 183 aa12.44□□□□□ -0.42
SRRM1-219ENST00000495561 TSR3Q9UJK0 312 aaKnown RBP12.44□□□□□ -0.42
SRRM1-219ENST00000495561 HPS5Q9UPZ3 1129 aa12.44□□□□□ -0.42
SRRM1-219ENST00000495561 C3orf80F5H4A9 247 aa12.43□□□□□ -0.42
SRRM1-219ENST00000495561 RGS20O76081 388 aa12.42□□□□□ -0.42
SRRM1-219ENST00000495561 NBPF26B4DH59 902 aa12.4□□□□□ -0.42
SRRM1-219ENST00000495561 TATDN2Q93075 761 aa12.4□□□□□ -0.42
SRRM1-219ENST00000495561 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
SRRM1-219ENST00000495561 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
SRRM1-219ENST00000495561 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
SRRM1-219ENST00000495561 RBM27Q9P2N5 1060 aaKnown RBP12.38□□□□□ -0.43
SRRM1-219ENST00000495561 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
SRRM1-219ENST00000495561 NPDC1Q9NQX5 325 aaPredicted RBP12.36□□□□□ -0.43
SRRM1-219ENST00000495561 PPP4CP60510 307 aa12.35□□□□□ -0.43
SRRM1-219ENST00000495561 KCNC4Q03721 635 aa12.35□□□□□ -0.43
SRRM1-219ENST00000495561 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
SRRM1-219ENST00000495561 MLLT3P42568 568 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-219ENST00000495561 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
SRRM1-219ENST00000495561 PADI6Q6TGC4 694 aa12.33□□□□□ -0.44
SRRM1-219ENST00000495561 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
SRRM1-219ENST00000495561 RNF40O75150 1001 aa12.25□□□□□ -0.45
SRRM1-219ENST00000495561 HDGFP51858 240 aaKnown RBP12.25□□□□□ -0.45
SRRM1-219ENST00000495561 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
SRRM1-219ENST00000495561 EYA1Q99502 592 aa12.23□□□□□ -0.45
SRRM1-219ENST00000495561 SWT1Q5T5J6 900 aaKnown RBP12.22□□□□□ -0.45
SRRM1-219ENST00000495561 MTRQ99707 1265 aa12.22□□□□□ -0.45
SRRM1-219ENST00000495561 APLP1P51693 650 aa12.21□□□□□ -0.45
SRRM1-219ENST00000495561 PTGDRQ13258 359 aa12.21□□□□□ -0.45
SRRM1-219ENST00000495561 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
SRRM1-219ENST00000495561 IL21Q9HBE4 155 aa12.19□□□□□ -0.46
SRRM1-219ENST00000495561 SLF2Q8IX21 1173 aa12.18□□□□□ -0.46
SRRM1-219ENST00000495561 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
SRRM1-219ENST00000495561 SEMA3EO15041 775 aa12.16□□□□□ -0.46
SRRM1-219ENST00000495561 ZNF516Q92618 1163 aa12.15□□□□□ -0.46
SRRM1-219ENST00000495561 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
SRRM1-219ENST00000495561 PLCB2Q00722 1185 aa12.14□□□□□ -0.47
SRRM1-219ENST00000495561 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
SRRM1-219ENST00000495561 DNAJB2P25686 324 aa12.11□□□□□ -0.47
SRRM1-219ENST00000495561 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
SRRM1-219ENST00000495561 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
SRRM1-219ENST00000495561 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
SRRM1-219ENST00000495561 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
SRRM1-219ENST00000495561 FCHSD2O94868 740 aa12.09□□□□□ -0.47
SRRM1-219ENST00000495561 COPS2P61201 443 aa12.09□□□□□ -0.47
SRRM1-219ENST00000495561 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
SRRM1-219ENST00000495561 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
SRRM1-219ENST00000495561 RCCD1A6NED2 376 aa12.06□□□□□ -0.48
SRRM1-219ENST00000495561 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
SRRM1-219ENST00000495561 PRKD2Q9BZL6 878 aa12.05□□□□□ -0.48
SRRM1-219ENST00000495561 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
SRRM1-219ENST00000495561 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms