RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
PHF3-205ENST00000494284 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
PHF3-205ENST00000494284 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
PHF3-205ENST00000494284 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
PHF3-205ENST00000494284 KDM5CP41229 1560 aa17.04■□□□□ 0.32
PHF3-205ENST00000494284 ROCK2O75116 1388 aaKnown RBP17.04■□□□□ 0.32
PHF3-205ENST00000494284 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
PHF3-205ENST00000494284 DHX29Q7Z478 1369 aaKnown RBP17.03■□□□□ 0.32
PHF3-205ENST00000494284 PLCH2O75038 1416 aa17.03■□□□□ 0.32
PHF3-205ENST00000494284 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
PHF3-205ENST00000494284 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
PHF3-205ENST00000494284 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
PHF3-205ENST00000494284 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
PHF3-205ENST00000494284 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
PHF3-205ENST00000494284 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
PHF3-205ENST00000494284 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
PHF3-205ENST00000494284 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
PHF3-205ENST00000494284 A2MP01023 1474 aa16.97■□□□□ 0.31
PHF3-205ENST00000494284 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
PHF3-205ENST00000494284 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
PHF3-205ENST00000494284 KIF3BO15066 747 aa16.95■□□□□ 0.3
PHF3-205ENST00000494284 ABCC1P33527 1531 aa16.95■□□□□ 0.3
PHF3-205ENST00000494284 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
PHF3-205ENST00000494284 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
PHF3-205ENST00000494284 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
PHF3-205ENST00000494284 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
PHF3-205ENST00000494284 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
PHF3-205ENST00000494284 UNC13BO14795 1591 aa16.92■□□□□ 0.3
PHF3-205ENST00000494284 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
PHF3-205ENST00000494284 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
PHF3-205ENST00000494284 FANCAO15360 1455 aa16.91■□□□□ 0.3
PHF3-205ENST00000494284 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
PHF3-205ENST00000494284 ASXL2Q76L83 1435 aa16.9■□□□□ 0.3
PHF3-205ENST00000494284 ARAP3Q8WWN8 1544 aa16.89■□□□□ 0.29
PHF3-205ENST00000494284 IQGAP3Q86VI3 1631 aa16.88■□□□□ 0.29
PHF3-205ENST00000494284 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
PHF3-205ENST00000494284 UGGT1Q9NYU2 1555 aa16.88■□□□□ 0.29
PHF3-205ENST00000494284 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
PHF3-205ENST00000494284 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
PHF3-205ENST00000494284 TESK2Q96S53 571 aa16.87■□□□□ 0.29
PHF3-205ENST00000494284 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
PHF3-205ENST00000494284 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
PHF3-205ENST00000494284 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
PHF3-205ENST00000494284 ADGRL1O94910 1474 aa16.85■□□□□ 0.29
PHF3-205ENST00000494284 E9PCH4 1651 aa16.85■□□□□ 0.29
PHF3-205ENST00000494284 CFAP65Q6ZU64 1925 aaKnown RBP16.85■□□□□ 0.29
PHF3-205ENST00000494284 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.29
PHF3-205ENST00000494284 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
PHF3-205ENST00000494284 PANK3Q9H999 370 aa16.83■□□□□ 0.28
PHF3-205ENST00000494284 RAPGEF3O95398 923 aa16.83■□□□□ 0.28
PHF3-205ENST00000494284 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
PHF3-205ENST00000494284 GGT6Q6P531 493 aa16.83■□□□□ 0.28
PHF3-205ENST00000494284 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
PHF3-205ENST00000494284 ATP10AO60312 1499 aa16.82■□□□□ 0.28
PHF3-205ENST00000494284 MAGI2Q86UL8 1455 aa16.81■□□□□ 0.28
PHF3-205ENST00000494284 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
PHF3-205ENST00000494284 ATP7AQ04656 1500 aa16.8■□□□□ 0.28
PHF3-205ENST00000494284 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
PHF3-205ENST00000494284 PER1O15534 1290 aaPredicted RBP16.79■□□□□ 0.28
PHF3-205ENST00000494284 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
PHF3-205ENST00000494284 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
PHF3-205ENST00000494284 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.27
PHF3-205ENST00000494284 MSH5O43196 834 aa16.76■□□□□ 0.27
PHF3-205ENST00000494284 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
PHF3-205ENST00000494284 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
PHF3-205ENST00000494284 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
PHF3-205ENST00000494284 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
PHF3-205ENST00000494284 ARID4BQ4LE39 1312 aaPredicted RBP16.74■□□□□ 0.27
PHF3-205ENST00000494284 GPRASP1Q5JY77 1395 aa16.74■□□□□ 0.27
PHF3-205ENST00000494284 PRDM15P57071 1507 aaPredicted RBP16.73■□□□□ 0.27
PHF3-205ENST00000494284 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
PHF3-205ENST00000494284 CD109Q6YHK3 1445 aa16.72■□□□□ 0.27
PHF3-205ENST00000494284 TMF1P82094 1093 aa16.72■□□□□ 0.27
PHF3-205ENST00000494284 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
PHF3-205ENST00000494284 MYT1Q01538 1121 aa16.71■□□□□ 0.27
PHF3-205ENST00000494284 SPHKAPQ2M3C7 1700 aa16.71■□□□□ 0.27
PHF3-205ENST00000494284 KIDINS220Q9ULH0 1771 aa16.71■□□□□ 0.27
PHF3-205ENST00000494284 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
PHF3-205ENST00000494284 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
PHF3-205ENST00000494284 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
PHF3-205ENST00000494284 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
PHF3-205ENST00000494284 DEPDC5O75140 1603 aa16.69■□□□□ 0.26
PHF3-205ENST00000494284 KANK1Q14678 1352 aa16.69■□□□□ 0.26
PHF3-205ENST00000494284 TRPM2O94759 1503 aa16.69■□□□□ 0.26
PHF3-205ENST00000494284 RALBP1Q15311 655 aa16.67■□□□□ 0.26
PHF3-205ENST00000494284 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
PHF3-205ENST00000494284 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
PHF3-205ENST00000494284 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
PHF3-205ENST00000494284 CEP152O94986 1710 aa16.67■□□□□ 0.26
PHF3-205ENST00000494284 PTPRTO14522 1441 aa16.67■□□□□ 0.26
PHF3-205ENST00000494284 CFAP74Q9C0B2 1584 aa16.66■□□□□ 0.26
PHF3-205ENST00000494284 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
PHF3-205ENST00000494284 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
PHF3-205ENST00000494284 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
PHF3-205ENST00000494284 TET3O43151 1660 aa16.65■□□□□ 0.26
PHF3-205ENST00000494284 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
PHF3-205ENST00000494284 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
PHF3-205ENST00000494284 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
PHF3-205ENST00000494284 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
PHF3-205ENST00000494284 MROH2AA6NES4 1674 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms