RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 NBPF8Q3BBV2 869 aa26.63■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 ZNF644Q9H582 1327 aaPredicted RBP26.6■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 MAP3K1Q13233 1512 aa26.6■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 PNISRQ8TF01 805 aaKnown RBP26.6■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 SMC4Q9NTJ3 1288 aa26.59■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 BACH2Q9BYV9 841 aa26.58■■□□□ 1.85
CHKB-CPT1B-203ENST00000492556 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 DDX11L8A8MPP1 907 aa26.57■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 TPRNQ4KMQ1 711 aa26.56■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 NAIPQ13075 1403 aa26.55■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 SRPK2P78362 688 aaKnown RBP26.55■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 COG6Q9Y2V7 657 aa26.55■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 APAF1O14727 1248 aa26.54■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 CDCA7LQ96GN5 454 aa26.54■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 NGEFQ8N5V2 710 aa26.53■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 PLCB2Q00722 1185 aa26.53■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 EFCAB2Q5VUJ9 269 aa26.53■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 IL27Q8NEV9 243 aa26.52■■□□□ 1.84
CHKB-CPT1B-203ENST00000492556 MCCP23508 829 aa26.48■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 RRP7AQ9Y3A4 280 aaKnown RBP26.47■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 MAPKBP1O60336 1514 aa26.47■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 HAP1P54257 671 aaPredicted RBP26.47■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 HSP90AA2PQ14568 343 aaPredicted RBP26.47■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 CALD1Q05682 793 aaKnown RBP26.46■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 SAFB2Q14151 953 aaKnown RBP eCLIP26.46■■□□□ 1.83
CHKB-CPT1B-203ENST00000492556 BRPF3Q9ULD4 1205 aa26.45■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 JPH4Q96JJ6 628 aa26.44■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 BCL2L13Q9BXK5 485 aa26.44■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 PCF11O94913 1555 aaKnown RBP26.43■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 ZKSCAN2Q63HK3 967 aa26.43■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 ADAMTS8Q9UP79 889 aa26.43■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 ANO8Q9HCE9 1232 aaPredicted RBP26.42■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 WASHC2CQ9Y4E1 1318 aa26.42■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 C11orf95C9JLR9 678 aaPredicted RBP26.41■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 CHAF1AQ13111 956 aaPredicted RBP26.41■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 CHMP5Q9NZZ3 219 aa26.41■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 SKOR2Q2VWA4 1001 aaPredicted RBP26.41■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 HDGFL2Q7Z4V5 671 aaPredicted RBP26.4■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 KIAA1107Q9UPP5 1409 aa26.4■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 FOXD4L1Q9NU39 408 aa26.4■■□□□ 1.82
CHKB-CPT1B-203ENST00000492556 SUPT6HQ7KZ85 1726 aaKnown RBP26.38■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 FRAT2O75474 233 aaPredicted RBP26.38■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.813e-8■■■■■ 28.1
CHKB-CPT1B-203ENST00000492556 AAMPQ13685 434 aa26.37■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 APBB1O00213 710 aa26.36■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 ZRSR1Q15695 479 aaKnown RBP26.36■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 NCOA1Q15788 1441 aa26.35■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 KIF3BO15066 747 aa26.35■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 KIAA2012Q0VF49 1180 aa26.34■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 SYAP1Q96A49 352 aaPredicted RBP26.34■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 SPAG9O60271 1321 aaKnown RBP26.34■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 STK26Q9P289 416 aa26.33■■□□□ 1.81
CHKB-CPT1B-203ENST00000492556 GGT6Q6P531 493 aa26.31■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 DDX49Q9Y6V7 483 aaKnown RBP26.3■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 PANK1Q8TE04 598 aa26.29■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 DDX19BQ9UMR2 479 aa26.29■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 DAPK1P53355 1430 aa26.29■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 DZIP1LQ8IYY4 767 aaKnown RBP26.28■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 GOLGA6L4A6NEF3 574 aa26.28■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 TERF2IPQ9NYB0 399 aa26.28■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 PPP2R1AP30153 589 aa26.28■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 FAM43AQ8N2R8 423 aa26.27■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 TRAK1Q9UPV9 953 aa26.27■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 OS9Q13438 667 aaPredicted RBP26.27■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 PLPPR3Q6T4P5 718 aa26.27■■□□□ 1.8
CHKB-CPT1B-203ENST00000492556 RUNDC1Q96C34 613 aa26.26■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 KCNJ4P48050 445 aa26.26■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 C22orf23Q9BZE7 217 aa26.26■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 ST18O60284 1047 aa26.26■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 ROCK1Q13464 1354 aa26.26■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 ANKRD45Q5TZF3 282 aa26.25■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 VSIG10Q8N0Z9 540 aa26.25■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 C14orf37Q86TY3 774 aa26.24■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 STAC3Q96MF2 364 aa26.24■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 HECW1Q76N89 1606 aa26.24■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 PTPN23Q9H3S7 1636 aa26.23■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 GOLGA6L6A8MZA4 724 aa26.23■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 MRE11P49959 708 aa26.22■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 PDE3AQ14432 1141 aa26.22■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 NBPF1Q3BBV0 1214 aa26.21■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 ZBTB7CA1YPR0 619 aa26.21■■□□□ 1.79
CHKB-CPT1B-203ENST00000492556 ARID3AQ99856 593 aa26.2■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 HMMRO75330 724 aa26.2■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 DRC7Q8IY82 874 aa26.18■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 RTF1Q92541 710 aaKnown RBP26.18■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 KIAA1211Q6ZU35 1233 aa26.17■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 PTPRGP23470 1445 aa26.16■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 NRDCO43847 1150 aa26.15■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 TRAK2O60296 914 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms