RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 ST18O60284 1047 aa8.88□□□□□ -0.99
FN1-223ENST00000490833 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
FN1-223ENST00000490833 MPHOSPH9Q99550 1183 aa8.88□□□□□ -0.99
FN1-223ENST00000490833 NUP153P49790 1475 aaKnown RBP8.88□□□□□ -0.99
FN1-223ENST00000490833 DAPK1P53355 1430 aa8.88□□□□□ -0.99
FN1-223ENST00000490833 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
FN1-223ENST00000490833 ITSN2Q9NZM3 1697 aa8.88□□□□□ -0.99
FN1-223ENST00000490833 FKBP8Q14318 412 aa8.87□□□□□ -0.99
FN1-223ENST00000490833 ZBTB47Q9UFB7 747 aaPredicted RBP8.87□□□□□ -0.99
FN1-223ENST00000490833 GTF3C3Q9Y5Q9 886 aa8.87□□□□□ -0.99
FN1-223ENST00000490833 ARID4BQ4LE39 1312 aaPredicted RBP8.86□□□□□ -0.99
FN1-223ENST00000490833 MAP3K13O43283 966 aa8.86□□□□□ -0.99
FN1-223ENST00000490833 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
FN1-223ENST00000490833 SIN3AQ96ST3 1273 aa8.86□□□□□ -0.99
FN1-223ENST00000490833 PTPRGP23470 1445 aa8.85□□□□□ -0.99
FN1-223ENST00000490833 PTPRKQ15262 1439 aa8.85□□□□□ -0.99
FN1-223ENST00000490833 ADGRL2O95490 1459 aa8.84□□□□□ -0.99
FN1-223ENST00000490833 SHANK2Q9UPX8 1470 aa8.84□□□□□ -0.99
FN1-223ENST00000490833 DNMT1P26358 1616 aaKnown RBP8.84□□□□□ -0.99
FN1-223ENST00000490833 ADCY10Q96PN6 1610 aa8.84□□□□□ -0.99
FN1-223ENST00000490833 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -0.99
FN1-223ENST00000490833 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
FN1-223ENST00000490833 ABCC5O15440 1437 aa8.83□□□□□ -1
FN1-223ENST00000490833 BMP2KQ9NSY1 1161 aaPredicted RBP8.83□□□□□ -1
FN1-223ENST00000490833 TRPC6Q9Y210 931 aa8.83□□□□□ -1
FN1-223ENST00000490833 CDK13Q14004 1512 aaKnown RBP8.83□□□□□ -1
FN1-223ENST00000490833 MAGI3Q5TCQ9 1506 aa8.83□□□□□ -1
FN1-223ENST00000490833 PLEKHH2Q8IVE3 1493 aa8.83□□□□□ -1
FN1-223ENST00000490833 NCOA1Q15788 1441 aa8.82□□□□□ -1
FN1-223ENST00000490833 GPATCH8Q9UKJ3 1502 aaKnown RBP8.82□□□□□ -1
FN1-223ENST00000490833 STAC3Q96MF2 364 aa8.82□□□□□ -1
FN1-223ENST00000490833 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
FN1-223ENST00000490833 CEP170Q5SW79 1584 aa8.82□□□□□ -1
FN1-223ENST00000490833 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
FN1-223ENST00000490833 ABCA8O94911 1581 aa8.81□□□□□ -1
FN1-223ENST00000490833 KIF14Q15058 1648 aa8.8□□□□□ -1
FN1-223ENST00000490833 TIE1P35590 1138 aa8.8□□□□□ -1
FN1-223ENST00000490833 DDX10Q13206 875 aaKnown RBP8.8□□□□□ -1
FN1-223ENST00000490833 YTHDC1Q96MU7 727 aaKnown RBP8.8□□□□□ -1
FN1-223ENST00000490833 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
FN1-223ENST00000490833 ANKRD30BQ9BXX2 1392 aa8.8□□□□□ -1
FN1-223ENST00000490833 RPRD2Q5VT52 1461 aaKnown RBP8.8□□□□□ -1
FN1-223ENST00000490833 SLC24A1O60721 1099 aa8.79□□□□□ -1
FN1-223ENST00000490833 SEC24BO95487 1268 aa8.79□□□□□ -1
FN1-223ENST00000490833 FAM212AQ96EL1 285 aa8.79□□□□□ -1
FN1-223ENST00000490833 PRG4Q92954 1404 aaPredicted RBP8.79□□□□□ -1
FN1-223ENST00000490833 ATP10BO94823 1461 aa8.78□□□□□ -1
FN1-223ENST00000490833 CAMSAP2Q08AD1 1489 aa8.78□□□□□ -1
FN1-223ENST00000490833 ANKRD50Q9ULJ7 1429 aa8.78□□□□□ -1
FN1-223ENST00000490833 KIAA1107Q9UPP5 1409 aa8.78□□□□□ -1
FN1-223ENST00000490833 PLB1Q6P1J6 1458 aa8.77□□□□□ -1
FN1-223ENST00000490833 SLAIN1Q8ND83 568 aa8.77□□□□□ -1.01
FN1-223ENST00000490833 ARHGEF5Q12774 1597 aa8.77□□□□□ -1.01
FN1-223ENST00000490833 ROCK2O75116 1388 aaKnown RBP8.76□□□□□ -1.01
FN1-223ENST00000490833 ADGBQ8N7X0 1667 aa8.76□□□□□ -1.01
FN1-223ENST00000490833 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
FN1-223ENST00000490833 NEFLP07196 543 aa8.76□□□□□ -1.01
FN1-223ENST00000490833 MYT1Q01538 1121 aa8.76□□□□□ -1.01
FN1-223ENST00000490833 ERICH6BQ5W0A0 696 aa8.76□□□□□ -1.01
FN1-223ENST00000490833 NUBP1P53384 320 aa8.75□□□□□ -1.01
FN1-223ENST00000490833 L3MBTL2Q969R5 705 aa8.75□□□□□ -1.01
FN1-223ENST00000490833 ZNF777Q9ULD5 760 aaPredicted RBP8.75□□□□□ -1.01
FN1-223ENST00000490833 ABCC10Q5T3U5 1492 aa8.75□□□□□ -1.01
FN1-223ENST00000490833 KTN1Q86UP2 1357 aaKnown RBP8.74□□□□□ -1.01
FN1-223ENST00000490833 C9orf84Q5VXU9 1444 aa8.74□□□□□ -1.01
FN1-223ENST00000490833 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
FN1-223ENST00000490833 UHRF1BP1LA0JNW5 1464 aa8.74□□□□□ -1.01
FN1-223ENST00000490833 CCDC141Q6ZP82 1450 aa8.73□□□□□ -1.01
FN1-223ENST00000490833 TRIM35Q9UPQ4 493 aa8.73□□□□□ -1.01
FN1-223ENST00000490833 KDM5DQ9BY66 1539 aa8.73□□□□□ -1.01
FN1-223ENST00000490833 NUP155O75694 1391 aa8.73□□□□□ -1.01
FN1-223ENST00000490833 ARHGEF12Q9NZN5 1544 aa8.72□□□□□ -1.01
FN1-223ENST00000490833 HSPA5P11021 654 aaKnown RBP8.72□□□□□ -1.01
FN1-223ENST00000490833 SGIP1Q9BQI5 828 aa8.72□□□□□ -1.01
FN1-223ENST00000490833 SHROOM2Q13796 1616 aa8.72□□□□□ -1.01
FN1-223ENST00000490833 PKD2Q13563 968 aa8.71□□□□□ -1.02
FN1-223ENST00000490833 DCAF8Q5TAQ9 597 aa8.71□□□□□ -1.02
FN1-223ENST00000490833 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
FN1-223ENST00000490833 FBXO3Q9UK99 471 aa8.71□□□□□ -1.02
FN1-223ENST00000490833 ZNF644Q9H582 1327 aaPredicted RBP8.71□□□□□ -1.02
FN1-223ENST00000490833 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.02
FN1-223ENST00000490833 CROCC2H7BZ55 1655 aa8.7□□□□□ -1.02
FN1-223ENST00000490833 ARID3CA6NKF2 412 aa8.7□□□□□ -1.02
FN1-223ENST00000490833 TMEM121BQ9BXQ6 578 aaPredicted RBP8.7□□□□□ -1.02
FN1-223ENST00000490833 KIF15Q9NS87 1388 aa8.7□□□□□ -1.02
FN1-223ENST00000490833 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
FN1-223ENST00000490833 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
FN1-223ENST00000490833 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
FN1-223ENST00000490833 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
FN1-223ENST00000490833 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
FN1-223ENST00000490833 WASHC2CQ9Y4E1 1318 aa8.69□□□□□ -1.02
FN1-223ENST00000490833 RTEL1-TNFRSF6BF6WH68 1400 aa8.68□□□□□ -1.02
FN1-223ENST00000490833 PLCH2O75038 1416 aa8.68□□□□□ -1.02
FN1-223ENST00000490833 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
FN1-223ENST00000490833 PZPP20742 1482 aa8.68□□□□□ -1.02
FN1-223ENST00000490833 TEX14Q8IWB6 1497 aa8.68□□□□□ -1.02
FN1-223ENST00000490833 MBD5Q9P267 1494 aa8.68□□□□□ -1.02
FN1-223ENST00000490833 DENND4BO75064 1496 aaPredicted RBP8.67□□□□□ -1.02
FN1-223ENST00000490833 PYGBP11216 843 aa8.67□□□□□ -1.02
FN1-223ENST00000490833 IER5LQ5T953 404 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms