RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 MAP3K7O43318 606 aa11.13□□□□□ -0.63
RAB4A-204ENST00000489342 PSEN2P49810 448 aa11.13□□□□□ -0.63
RAB4A-204ENST00000489342 MLLT3P42568 568 aaPredicted RBP11.12□□□□□ -0.63
RAB4A-204ENST00000489342 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
RAB4A-204ENST00000489342 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
RAB4A-204ENST00000489342 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
RAB4A-204ENST00000489342 SMYD5Q6GMV2 418 aa11.11□□□□□ -0.63
RAB4A-204ENST00000489342 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
RAB4A-204ENST00000489342 OSBPP22059 807 aa11.08□□□□□ -0.64
RAB4A-204ENST00000489342 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
RAB4A-204ENST00000489342 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
RAB4A-204ENST00000489342 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
RAB4A-204ENST00000489342 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
RAB4A-204ENST00000489342 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
RAB4A-204ENST00000489342 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
RAB4A-204ENST00000489342 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
RAB4A-204ENST00000489342 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
RAB4A-204ENST00000489342 COL9A1P20849 921 aa11.02□□□□□ -0.65
RAB4A-204ENST00000489342 TK2O00142 265 aa11.01□□□□□ -0.65
RAB4A-204ENST00000489342 NUTM2FA1L443 756 aa11□□□□□ -0.65
RAB4A-204ENST00000489342 CERKQ8TCT0 537 aa11□□□□□ -0.65
RAB4A-204ENST00000489342 ZBED2Q9BTP6 218 aa11□□□□□ -0.65
RAB4A-204ENST00000489342 CDHR5Q9HBB8 845 aa11□□□□□ -0.65
RAB4A-204ENST00000489342 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
RAB4A-204ENST00000489342 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
RAB4A-204ENST00000489342 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
RAB4A-204ENST00000489342 SLC4A5Q9BY07 1137 aa10.98□□□□□ -0.65
RAB4A-204ENST00000489342 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
RAB4A-204ENST00000489342 RBM26Q5T8P6 1007 aaKnown RBP10.97□□□□□ -0.65
RAB4A-204ENST00000489342 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
RAB4A-204ENST00000489342 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
RAB4A-204ENST00000489342 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
RAB4A-204ENST00000489342 PRSS12P56730 875 aa10.93□□□□□ -0.66
RAB4A-204ENST00000489342 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
RAB4A-204ENST00000489342 GOLGA8CPA6NN73 597 aa10.92□□□□□ -0.66
RAB4A-204ENST00000489342 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
RAB4A-204ENST00000489342 MRPL50Q8N5N7 158 aaKnown RBP10.92□□□□□ -0.66
RAB4A-204ENST00000489342 RABGEF1Q9UJ41 708 aa10.92□□□□□ -0.66
RAB4A-204ENST00000489342 HRO43593 1189 aa10.91□□□□□ -0.66
RAB4A-204ENST00000489342 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
RAB4A-204ENST00000489342 FCHSD2O94868 740 aa10.91□□□□□ -0.66
RAB4A-204ENST00000489342 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
RAB4A-204ENST00000489342 PTGDRQ13258 359 aa10.9□□□□□ -0.66
RAB4A-204ENST00000489342 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
RAB4A-204ENST00000489342 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
RAB4A-204ENST00000489342 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
RAB4A-204ENST00000489342 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
RAB4A-204ENST00000489342 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
RAB4A-204ENST00000489342 BCANQ96GW7 911 aa10.88□□□□□ -0.67
RAB4A-204ENST00000489342 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
RAB4A-204ENST00000489342 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
RAB4A-204ENST00000489342 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
RAB4A-204ENST00000489342 BHMG1C9JSJ3 638 aaPredicted RBP10.86□□□□□ -0.67
RAB4A-204ENST00000489342 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
RAB4A-204ENST00000489342 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
RAB4A-204ENST00000489342 HIC1Q14526 733 aa10.85□□□□□ -0.67
RAB4A-204ENST00000489342 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
RAB4A-204ENST00000489342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
RAB4A-204ENST00000489342 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
RAB4A-204ENST00000489342 SMAPO00193 183 aa10.82□□□□□ -0.68
RAB4A-204ENST00000489342 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
RAB4A-204ENST00000489342 LAPTM4BQ86VI4 370 aa10.82□□□□□ -0.68
RAB4A-204ENST00000489342 TATDN2Q93075 761 aa10.82□□□□□ -0.68
RAB4A-204ENST00000489342 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
RAB4A-204ENST00000489342 GNPATO15228 680 aa10.81□□□□□ -0.68
RAB4A-204ENST00000489342 WNT2BQ93097 391 aa10.81□□□□□ -0.68
RAB4A-204ENST00000489342 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
RAB4A-204ENST00000489342 TTC13Q8NBP0 860 aa10.79□□□□□ -0.68
RAB4A-204ENST00000489342 ANKK1Q8NFD2 765 aa10.79□□□□□ -0.68
RAB4A-204ENST00000489342 ZFRQ96KR1 1074 aaKnown RBP10.78□□□□□ -0.68
RAB4A-204ENST00000489342 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
RAB4A-204ENST00000489342 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
RAB4A-204ENST00000489342 GPR37O15354 613 aa10.76□□□□□ -0.69
RAB4A-204ENST00000489342 C3orf80F5H4A9 247 aa10.74□□□□□ -0.69
RAB4A-204ENST00000489342 FECHP22830 423 aa10.74□□□□□ -0.69
RAB4A-204ENST00000489342 PTPN5P54829 565 aa10.74□□□□□ -0.69
RAB4A-204ENST00000489342 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
RAB4A-204ENST00000489342 LRCH3Q96II8 777 aa10.74□□□□□ -0.69
RAB4A-204ENST00000489342 ADGRG1Q9Y653 693 aa10.74□□□□□ -0.69
RAB4A-204ENST00000489342 OATP04181 439 aa10.73□□□□□ -0.69
RAB4A-204ENST00000489342 RNF40O75150 1001 aa10.72□□□□□ -0.69
RAB4A-204ENST00000489342 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
RAB4A-204ENST00000489342 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
RAB4A-204ENST00000489342 HCSTQ9UBK5 93 aa10.71□□□□□ -0.69
RAB4A-204ENST00000489342 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
RAB4A-204ENST00000489342 BCAMP50895 628 aa10.7□□□□□ -0.7
RAB4A-204ENST00000489342 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
RAB4A-204ENST00000489342 KRI1Q8N9T8 703 aaKnown RBP10.7□□□□□ -0.7
RAB4A-204ENST00000489342 EYA1Q99502 592 aa10.7□□□□□ -0.7
RAB4A-204ENST00000489342 SOWAHBA6NEL2 793 aa10.69□□□□□ -0.7
RAB4A-204ENST00000489342 DNAJB2P25686 324 aa10.69□□□□□ -0.7
RAB4A-204ENST00000489342 MAP2K5Q13163 448 aa10.69□□□□□ -0.7
RAB4A-204ENST00000489342 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
RAB4A-204ENST00000489342 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
RAB4A-204ENST00000489342 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
RAB4A-204ENST00000489342 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
RAB4A-204ENST00000489342 METTL3Q86U44 580 aaKnown RBP10.66□□□□□ -0.7
RAB4A-204ENST00000489342 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
RAB4A-204ENST00000489342 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
RAB4A-204ENST00000489342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms