RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 KCNK17Q96T54 332 aa9.52□□□□□ -0.89
SSR1-209ENST00000488834 EPAS1Q99814 870 aa9.52□□□□□ -0.89
SSR1-209ENST00000488834 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
SSR1-209ENST00000488834 FBXW7Q969H0 707 aa9.51□□□□□ -0.89
SSR1-209ENST00000488834 ZDHHC16Q969W1 377 aa9.5□□□□□ -0.89
SSR1-209ENST00000488834 RBM33Q96EV2 1170 aaKnown RBP9.5□□□□□ -0.89
SSR1-209ENST00000488834 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
SSR1-209ENST00000488834 MAP3K7O43318 606 aa9.49□□□□□ -0.89
SSR1-209ENST00000488834 KCNH8Q96L42 1107 aa9.49□□□□□ -0.89
SSR1-209ENST00000488834 PBX2P40425 430 aa9.48□□□□□ -0.89
SSR1-209ENST00000488834 COL9A1P20849 921 aa9.47□□□□□ -0.89
SSR1-209ENST00000488834 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
SSR1-209ENST00000488834 OSBPP22059 807 aa9.46□□□□□ -0.9
SSR1-209ENST00000488834 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
SSR1-209ENST00000488834 EN1Q05925 392 aaPredicted RBP9.45□□□□□ -0.9
SSR1-209ENST00000488834 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
SSR1-209ENST00000488834 HRO43593 1189 aa9.44□□□□□ -0.9
SSR1-209ENST00000488834 RBM26Q5T8P6 1007 aaKnown RBP9.44□□□□□ -0.9
SSR1-209ENST00000488834 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
SSR1-209ENST00000488834 PTPREP23469 700 aa9.43□□□□□ -0.9
SSR1-209ENST00000488834 TSR1Q2NL82 804 aaKnown RBP9.41□□□□□ -0.9
SSR1-209ENST00000488834 PROX2Q3B8N5 592 aa9.41□□□□□ -0.9
SSR1-209ENST00000488834 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
SSR1-209ENST00000488834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
SSR1-209ENST00000488834 ZBED2Q9BTP6 218 aa9.41□□□□□ -0.9
SSR1-209ENST00000488834 MYT1LQ9UL68 1186 aa9.41□□□□□ -0.9
SSR1-209ENST00000488834 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
SSR1-209ENST00000488834 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
SSR1-209ENST00000488834 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
SSR1-209ENST00000488834 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
SSR1-209ENST00000488834 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
SSR1-209ENST00000488834 TK2O00142 265 aa9.36□□□□□ -0.91
SSR1-209ENST00000488834 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
SSR1-209ENST00000488834 PPP1R3GB7ZBB8 358 aa9.35□□□□□ -0.91
SSR1-209ENST00000488834 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
SSR1-209ENST00000488834 FCHSD2O94868 740 aa9.35□□□□□ -0.91
SSR1-209ENST00000488834 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
SSR1-209ENST00000488834 PTGDRQ13258 359 aa9.32□□□□□ -0.92
SSR1-209ENST00000488834 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
SSR1-209ENST00000488834 HIC1Q14526 733 aa9.3□□□□□ -0.92
SSR1-209ENST00000488834 GNPATO15228 680 aa9.29□□□□□ -0.92
SSR1-209ENST00000488834 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
SSR1-209ENST00000488834 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
SSR1-209ENST00000488834 TSKSQ9UJT2 592 aa9.29□□□□□ -0.92
SSR1-209ENST00000488834 PRSS12P56730 875 aa9.28□□□□□ -0.92
SSR1-209ENST00000488834 STAC3Q96MF2 364 aa9.28□□□□□ -0.92
SSR1-209ENST00000488834 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
SSR1-209ENST00000488834 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
SSR1-209ENST00000488834 KRI1Q8N9T8 703 aaKnown RBP9.27□□□□□ -0.93
SSR1-209ENST00000488834 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
SSR1-209ENST00000488834 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
SSR1-209ENST00000488834 PADI6Q6TGC4 694 aa9.26□□□□□ -0.93
SSR1-209ENST00000488834 PACS2Q86VP3 889 aa9.26□□□□□ -0.93
SSR1-209ENST00000488834 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
SSR1-209ENST00000488834 TRIM6-TRIM34B2RNG4 842 aa9.25□□□□□ -0.93
SSR1-209ENST00000488834 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
SSR1-209ENST00000488834 GPR37O15354 613 aa9.24□□□□□ -0.93
SSR1-209ENST00000488834 SMAPO00193 183 aa9.23□□□□□ -0.93
SSR1-209ENST00000488834 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
SSR1-209ENST00000488834 NBPF26B4DH59 902 aa9.22□□□□□ -0.93
SSR1-209ENST00000488834 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
SSR1-209ENST00000488834 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.94
SSR1-209ENST00000488834 ZMYND10O75800 440 aa9.21□□□□□ -0.94
SSR1-209ENST00000488834 FECHP22830 423 aa9.21□□□□□ -0.94
SSR1-209ENST00000488834 MAP2K5Q13163 448 aa9.2□□□□□ -0.94
SSR1-209ENST00000488834 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
SSR1-209ENST00000488834 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
SSR1-209ENST00000488834 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
SSR1-209ENST00000488834 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
SSR1-209ENST00000488834 RBM46Q8TBY0 533 aaKnown RBP9.19□□□□□ -0.94
SSR1-209ENST00000488834 OATP04181 439 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 BCAMP50895 628 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 FAM161AQ3B820 660 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 MINK1Q8N4C8 1332 aaPredicted RBP9.18□□□□□ -0.94
SSR1-209ENST00000488834 TTC13Q8NBP0 860 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 TATDN2Q93075 761 aa9.18□□□□□ -0.94
SSR1-209ENST00000488834 IRF6O14896 467 aa9.16□□□□□ -0.94
SSR1-209ENST00000488834 PTPN5P54829 565 aa9.16□□□□□ -0.94
SSR1-209ENST00000488834 WNT2BQ93097 391 aa9.16□□□□□ -0.94
SSR1-209ENST00000488834 ADGRG1Q9Y653 693 aa9.16□□□□□ -0.94
SSR1-209ENST00000488834 CCDC102AQ96A19 550 aa9.15□□□□□ -0.94
SSR1-209ENST00000488834 ZFRQ96KR1 1074 aaKnown RBP9.15□□□□□ -0.94
SSR1-209ENST00000488834 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
SSR1-209ENST00000488834 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
SSR1-209ENST00000488834 HDGFP51858 240 aaKnown RBP9.14□□□□□ -0.95
SSR1-209ENST00000488834 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
SSR1-209ENST00000488834 LAPTM4BQ86VI4 370 aa9.13□□□□□ -0.95
SSR1-209ENST00000488834 AK7Q96M32 723 aa9.13□□□□□ -0.95
SSR1-209ENST00000488834 METTL3Q86U44 580 aaKnown RBP9.12□□□□□ -0.95
SSR1-209ENST00000488834 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
SSR1-209ENST00000488834 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
SSR1-209ENST00000488834 DNAJB2P25686 324 aa9.1□□□□□ -0.95
SSR1-209ENST00000488834 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
SSR1-209ENST00000488834 EYA1Q99502 592 aa9.1□□□□□ -0.95
SSR1-209ENST00000488834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
SSR1-209ENST00000488834 RCCD1A6NED2 376 aa9.09□□□□□ -0.95
SSR1-209ENST00000488834 SOWAHBA6NEL2 793 aa9.09□□□□□ -0.95
SSR1-209ENST00000488834 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms