RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
CDHR3-213ENST00000488386 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
CDHR3-213ENST00000488386 FOXK1P85037 733 aa10.26□□□□□ -0.77
CDHR3-213ENST00000488386 FHAD1B1AJZ9 1412 aa10.25□□□□□ -0.77
CDHR3-213ENST00000488386 ERICH3Q5RHP9 1530 aa10.25□□□□□ -0.77
CDHR3-213ENST00000488386 PLPP6Q8IY26 295 aa10.24□□□□□ -0.77
CDHR3-213ENST00000488386 NUP160Q12769 1436 aa10.23□□□□□ -0.77
CDHR3-213ENST00000488386 HOXB3P14651 431 aaPredicted RBP10.19□□□□□ -0.78
CDHR3-213ENST00000488386 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
CDHR3-213ENST00000488386 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
CDHR3-213ENST00000488386 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
CDHR3-213ENST00000488386 IGF1RP08069 1367 aa10.18□□□□□ -0.78
CDHR3-213ENST00000488386 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
CDHR3-213ENST00000488386 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
CDHR3-213ENST00000488386 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
CDHR3-213ENST00000488386 RUSC2Q8N2Y8 1516 aa10.17□□□□□ -0.78
CDHR3-213ENST00000488386 PRG4Q92954 1404 aaPredicted RBP10.16□□□□□ -0.78
CDHR3-213ENST00000488386 E2F4Q16254 413 aa10.15□□□□□ -0.78
CDHR3-213ENST00000488386 CUL7Q14999 1698 aa10.14□□□□□ -0.79
CDHR3-213ENST00000488386 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDHR3-213ENST00000488386 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
CDHR3-213ENST00000488386 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
CDHR3-213ENST00000488386 TTBK1Q5TCY1 1321 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-213ENST00000488386 SLC34A2O95436 690 aa10.11□□□□□ -0.79
CDHR3-213ENST00000488386 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
CDHR3-213ENST00000488386 DPYSL4O14531 572 aa10.09□□□□□ -0.79
CDHR3-213ENST00000488386 DOK7Q18PE1 504 aa10.09□□□□□ -0.79
CDHR3-213ENST00000488386 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDHR3-213ENST00000488386 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
CDHR3-213ENST00000488386 PTCD2Q8WV60 388 aaKnown RBP10.08□□□□□ -0.8
CDHR3-213ENST00000488386 PCDHGA4Q9Y5G9 962 aa10.08□□□□□ -0.8
CDHR3-213ENST00000488386 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-213ENST00000488386 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
CDHR3-213ENST00000488386 SNPHO15079 494 aa10.05□□□□□ -0.8
CDHR3-213ENST00000488386 ARSIQ5FYB1 569 aa10.05□□□□□ -0.8
CDHR3-213ENST00000488386 GPR153Q6NV75 609 aa10.05□□□□□ -0.8
CDHR3-213ENST00000488386 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
CDHR3-213ENST00000488386 ADCY10Q96PN6 1610 aa10.04□□□□□ -0.8
CDHR3-213ENST00000488386 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
CDHR3-213ENST00000488386 IQGAP2Q13576 1575 aa10.04□□□□□ -0.8
CDHR3-213ENST00000488386 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
CDHR3-213ENST00000488386 ST18O60284 1047 aa10.03□□□□□ -0.8
CDHR3-213ENST00000488386 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
CDHR3-213ENST00000488386 KIF13AQ9H1H9 1805 aa10.03□□□□□ -0.8
CDHR3-213ENST00000488386 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
CDHR3-213ENST00000488386 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
CDHR3-213ENST00000488386 NUDT7P0C024 238 aa10.01□□□□□ -0.81
CDHR3-213ENST00000488386 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
CDHR3-213ENST00000488386 PDIA6Q15084 440 aa10.01□□□□□ -0.81
CDHR3-213ENST00000488386 FAM163AQ96GL9 167 aaPredicted RBP10.01□□□□□ -0.81
CDHR3-213ENST00000488386 ZSWIM6Q9HCJ5 1215 aa10.01□□□□□ -0.81
CDHR3-213ENST00000488386 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
CDHR3-213ENST00000488386 DISP1Q96F81 1524 aa9.99□□□□□ -0.81
CDHR3-213ENST00000488386 EVI5O60447 810 aa9.99□□□□□ -0.81
CDHR3-213ENST00000488386 CTTNBP2Q8WZ74 1663 aa9.99□□□□□ -0.81
CDHR3-213ENST00000488386 PTPRGP23470 1445 aa9.99□□□□□ -0.81
CDHR3-213ENST00000488386 TBC1D12O60347 775 aa9.97□□□□□ -0.81
CDHR3-213ENST00000488386 FAM9AQ8IZU1 332 aaPredicted RBP9.97□□□□□ -0.81
CDHR3-213ENST00000488386 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
CDHR3-213ENST00000488386 CARMIL2Q6F5E8 1435 aa9.97□□□□□ -0.81
CDHR3-213ENST00000488386 KIAA0556O60303 1618 aa9.96□□□□□ -0.81
CDHR3-213ENST00000488386 SEMA3EO15041 775 aa9.96□□□□□ -0.82
CDHR3-213ENST00000488386 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.82
CDHR3-213ENST00000488386 MARVELD3Q96A59 401 aa9.96□□□□□ -0.82
CDHR3-213ENST00000488386 PRXQ9BXM0 1461 aa9.95□□□□□ -0.82
CDHR3-213ENST00000488386 UGGT2Q9NYU1 1516 aa9.95□□□□□ -0.82
CDHR3-213ENST00000488386 DIP2BQ9P265 1576 aa9.95□□□□□ -0.82
CDHR3-213ENST00000488386 TSPOAP1O95153 1857 aa9.95□□□□□ -0.82
CDHR3-213ENST00000488386 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
CDHR3-213ENST00000488386 ABCC10Q5T3U5 1492 aa9.94□□□□□ -0.82
CDHR3-213ENST00000488386 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
CDHR3-213ENST00000488386 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
CDHR3-213ENST00000488386 MLLT3P42568 568 aaPredicted RBP9.93□□□□□ -0.82
CDHR3-213ENST00000488386 RANGAP1P46060 587 aaPredicted RBP9.93□□□□□ -0.82
CDHR3-213ENST00000488386 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
CDHR3-213ENST00000488386 ABCC2Q92887 1545 aa9.92□□□□□ -0.82
CDHR3-213ENST00000488386 UACAQ9BZF9 1416 aa9.91□□□□□ -0.82
CDHR3-213ENST00000488386 DDX12PQ92771 950 aa9.91□□□□□ -0.82
CDHR3-213ENST00000488386 ARID3CA6NKF2 412 aa9.9□□□□□ -0.82
CDHR3-213ENST00000488386 EMP3P54852 163 aa9.9□□□□□ -0.82
CDHR3-213ENST00000488386 PLB1Q6P1J6 1458 aa9.9□□□□□ -0.83
CDHR3-213ENST00000488386 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
CDHR3-213ENST00000488386 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
CDHR3-213ENST00000488386 TESPA1A2RU30 521 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-213ENST00000488386 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-213ENST00000488386 NBR1Q14596 966 aa9.89□□□□□ -0.83
CDHR3-213ENST00000488386 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
CDHR3-213ENST00000488386 ASXL2Q76L83 1435 aa9.89□□□□□ -0.83
CDHR3-213ENST00000488386 UHRF1BP1LA0JNW5 1464 aa9.88□□□□□ -0.83
CDHR3-213ENST00000488386 PTGER2P43116 358 aa9.88□□□□□ -0.83
CDHR3-213ENST00000488386 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
CDHR3-213ENST00000488386 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
CDHR3-213ENST00000488386 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
CDHR3-213ENST00000488386 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
CDHR3-213ENST00000488386 FOSBP53539 338 aa9.86□□□□□ -0.83
CDHR3-213ENST00000488386 PPRC1Q5VV67 1664 aaKnown RBP9.86□□□□□ -0.83
CDHR3-213ENST00000488386 KDM5BQ9UGL1 1544 aa9.86□□□□□ -0.83
CDHR3-213ENST00000488386 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
CDHR3-213ENST00000488386 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
CDHR3-213ENST00000488386 ZNF454Q8N9F8 522 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms