RNA–Protein interactions for RNA: ENST00000488354.1

PSMD1-211, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 659 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-211ENST00000488354 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
PSMD1-211ENST00000488354 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
PSMD1-211ENST00000488354 PCDHGA10Q9Y5H3 936 aa11.38□□□□□ -0.59
PSMD1-211ENST00000488354 RGS20O76081 388 aa11.37□□□□□ -0.59
PSMD1-211ENST00000488354 COL9A1P20849 921 aa11.37□□□□□ -0.59
PSMD1-211ENST00000488354 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
PSMD1-211ENST00000488354 BCAMP50895 628 aa11.35□□□□□ -0.59
PSMD1-211ENST00000488354 RABGEF1Q9UJ41 708 aa11.35□□□□□ -0.59
PSMD1-211ENST00000488354 MFSD10Q14728 455 aa11.33□□□□□ -0.6
PSMD1-211ENST00000488354 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
PSMD1-211ENST00000488354 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
PSMD1-211ENST00000488354 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
PSMD1-211ENST00000488354 PHF14O94880 888 aa11.29□□□□□ -0.6
PSMD1-211ENST00000488354 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
PSMD1-211ENST00000488354 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
PSMD1-211ENST00000488354 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
PSMD1-211ENST00000488354 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
PSMD1-211ENST00000488354 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
PSMD1-211ENST00000488354 WBP1LQ9NX94 342 aa11.26□□□□□ -0.61
PSMD1-211ENST00000488354 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
PSMD1-211ENST00000488354 C6orf132Q5T0Z8 1188 aa11.25□□□□□ -0.61
PSMD1-211ENST00000488354 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
PSMD1-211ENST00000488354 DPYSL4O14531 572 aa11.24□□□□□ -0.61
PSMD1-211ENST00000488354 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
PSMD1-211ENST00000488354 KCNC4Q03721 635 aa11.22□□□□□ -0.61
PSMD1-211ENST00000488354 DDX12PQ92771 950 aa11.22□□□□□ -0.61
PSMD1-211ENST00000488354 Q6ZNB5 142 aa11.21□□□□□ -0.61
PSMD1-211ENST00000488354 EPAS1Q99814 870 aa11.21□□□□□ -0.61
PSMD1-211ENST00000488354 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
PSMD1-211ENST00000488354 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
PSMD1-211ENST00000488354 NYAP1Q6ZVC0 841 aa11.18□□□□□ -0.62
PSMD1-211ENST00000488354 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
PSMD1-211ENST00000488354 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
PSMD1-211ENST00000488354 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
PSMD1-211ENST00000488354 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
PSMD1-211ENST00000488354 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
PSMD1-211ENST00000488354 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
PSMD1-211ENST00000488354 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
PSMD1-211ENST00000488354 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
PSMD1-211ENST00000488354 MAP3K7O43318 606 aa11.12□□□□□ -0.63
PSMD1-211ENST00000488354 NBR1Q14596 966 aa11.12□□□□□ -0.63
PSMD1-211ENST00000488354 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
PSMD1-211ENST00000488354 PPP4CP60510 307 aa11.1□□□□□ -0.63
PSMD1-211ENST00000488354 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
PSMD1-211ENST00000488354 SMAPO00193 183 aa11.09□□□□□ -0.63
PSMD1-211ENST00000488354 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
PSMD1-211ENST00000488354 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
PSMD1-211ENST00000488354 GFRA3O60609 400 aa11.05□□□□□ -0.64
PSMD1-211ENST00000488354 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
PSMD1-211ENST00000488354 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
PSMD1-211ENST00000488354 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
PSMD1-211ENST00000488354 RNF40O75150 1001 aa11.01□□□□□ -0.65
PSMD1-211ENST00000488354 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
PSMD1-211ENST00000488354 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
PSMD1-211ENST00000488354 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
PSMD1-211ENST00000488354 PRSS12P56730 875 aa10.99□□□□□ -0.65
PSMD1-211ENST00000488354 PDIA6Q15084 440 aa10.99□□□□□ -0.65
PSMD1-211ENST00000488354 TJAP1Q5JTD0 557 aa10.99□□□□□ -0.65
PSMD1-211ENST00000488354 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
PSMD1-211ENST00000488354 LAPTM4AQ15012 233 aa10.98□□□□□ -0.65
PSMD1-211ENST00000488354 FAM198AQ9UFP1 575 aa10.98□□□□□ -0.65
PSMD1-211ENST00000488354 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
PSMD1-211ENST00000488354 TRAF7Q6Q0C0 670 aa10.97□□□□□ -0.65
PSMD1-211ENST00000488354 MTRQ99707 1265 aa10.97□□□□□ -0.65
PSMD1-211ENST00000488354 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
PSMD1-211ENST00000488354 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.65
PSMD1-211ENST00000488354 TATDN2Q93075 761 aa10.96□□□□□ -0.65
PSMD1-211ENST00000488354 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
PSMD1-211ENST00000488354 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
PSMD1-211ENST00000488354 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
PSMD1-211ENST00000488354 WDR70Q9NW82 654 aa10.95□□□□□ -0.66
PSMD1-211ENST00000488354 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
PSMD1-211ENST00000488354 NBPF26B4DH59 902 aa10.93□□□□□ -0.66
PSMD1-211ENST00000488354 LCE2BO14633 110 aa10.92□□□□□ -0.66
PSMD1-211ENST00000488354 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
PSMD1-211ENST00000488354 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
PSMD1-211ENST00000488354 E2F4Q16254 413 aa10.91□□□□□ -0.66
PSMD1-211ENST00000488354 CDHR5Q9HBB8 845 aa10.9□□□□□ -0.66
PSMD1-211ENST00000488354 APLP1P51693 650 aa10.89□□□□□ -0.67
PSMD1-211ENST00000488354 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
PSMD1-211ENST00000488354 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
PSMD1-211ENST00000488354 NRG2O14511 850 aaPredicted RBP10.87□□□□□ -0.67
PSMD1-211ENST00000488354 COPS2P61201 443 aa10.87□□□□□ -0.67
PSMD1-211ENST00000488354 V9GY48 417 aaPredicted RBP10.85□□□□□ -0.67
PSMD1-211ENST00000488354 OSBPP22059 807 aa10.84□□□□□ -0.67
PSMD1-211ENST00000488354 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
PSMD1-211ENST00000488354 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
PSMD1-211ENST00000488354 KCNV2Q8TDN2 545 aa10.82□□□□□ -0.68
PSMD1-211ENST00000488354 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
PSMD1-211ENST00000488354 GGCXP38435 758 aa10.8□□□□□ -0.68
PSMD1-211ENST00000488354 ZNF787Q6DD87 383 aa10.8□□□□□ -0.68
PSMD1-211ENST00000488354 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
PSMD1-211ENST00000488354 SLF2Q8IX21 1173 aa10.79□□□□□ -0.68
PSMD1-211ENST00000488354 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
PSMD1-211ENST00000488354 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
PSMD1-211ENST00000488354 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
PSMD1-211ENST00000488354 ARIH1Q9Y4X5 557 aaPredicted RBP10.76□□□□□ -0.69
PSMD1-211ENST00000488354 NPDC1Q9NQX5 325 aaPredicted RBP10.75□□□□□ -0.69
PSMD1-211ENST00000488354 ZPR1O75312 459 aa10.74□□□□□ -0.69
PSMD1-211ENST00000488354 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms