RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 SUPT5HO00267 1087 aaKnown RBP9.24□□□□□ -0.93
SRRM1-215ENST00000488317 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
SRRM1-215ENST00000488317 JPH4Q96JJ6 628 aa9.23□□□□□ -0.93
SRRM1-215ENST00000488317 CLCN1P35523 988 aa9.21□□□□□ -0.94
SRRM1-215ENST00000488317 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
SRRM1-215ENST00000488317 MDM2Q00987 491 aaPredicted RBP9.2□□□□□ -0.94
SRRM1-215ENST00000488317 NUDT7P0C024 238 aa9.19□□□□□ -0.94
SRRM1-215ENST00000488317 FOSBP53539 338 aa9.19□□□□□ -0.94
SRRM1-215ENST00000488317 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
SRRM1-215ENST00000488317 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
SRRM1-215ENST00000488317 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
SRRM1-215ENST00000488317 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
SRRM1-215ENST00000488317 KDM4FA0A1W2PPD8 638 aa9.18□□□□□ -0.94
SRRM1-215ENST00000488317 RIMBP2O15034 1052 aa9.18□□□□□ -0.94
SRRM1-215ENST00000488317 MS4A1P11836 297 aa9.18□□□□□ -0.94
SRRM1-215ENST00000488317 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
SRRM1-215ENST00000488317 ARXQ96QS3 562 aa9.18□□□□□ -0.94
SRRM1-215ENST00000488317 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
SRRM1-215ENST00000488317 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
SRRM1-215ENST00000488317 OATP04181 439 aa9.17□□□□□ -0.94
SRRM1-215ENST00000488317 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
SRRM1-215ENST00000488317 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.944e-8■□□□□ 8.4
SRRM1-215ENST00000488317 PCMTD1Q96MG8 357 aaPredicted RBP9.17□□□□□ -0.94
SRRM1-215ENST00000488317 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
SRRM1-215ENST00000488317 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
SRRM1-215ENST00000488317 ATP1B4Q9UN42 357 aaPredicted RBP9.16□□□□□ -0.94
SRRM1-215ENST00000488317 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
SRRM1-215ENST00000488317 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
SRRM1-215ENST00000488317 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
SRRM1-215ENST00000488317 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
SRRM1-215ENST00000488317 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
SRRM1-215ENST00000488317 NLRP7Q8WX94 980 aa9.13□□□□□ -0.95
SRRM1-215ENST00000488317 TMUB1Q9BVT8 246 aa9.13□□□□□ -0.95
SRRM1-215ENST00000488317 ADAM33Q9BZ11 813 aa9.13□□□□□ -0.95
SRRM1-215ENST00000488317 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
SRRM1-215ENST00000488317 ZSWIM6Q9HCJ5 1215 aa9.12□□□□□ -0.95
SRRM1-215ENST00000488317 SCUBE2Q9NQ36 999 aa9.12□□□□□ -0.95
SRRM1-215ENST00000488317 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
SRRM1-215ENST00000488317 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
SRRM1-215ENST00000488317 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
SRRM1-215ENST00000488317 POTEJP0CG39 1038 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 PRSS12P56730 875 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 FLIIQ13045 1269 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 SH3D19Q5HYK7 790 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 GPR153Q6NV75 609 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
SRRM1-215ENST00000488317 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
SRRM1-215ENST00000488317 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
SRRM1-215ENST00000488317 RBM46Q8TBY0 533 aaKnown RBP9.09□□□□□ -0.95
SRRM1-215ENST00000488317 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-215ENST00000488317 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
SRRM1-215ENST00000488317 LHX6Q9UPM6 363 aa9.09□□□□□ -0.95
SRRM1-215ENST00000488317 TTC13Q8NBP0 860 aa9.08□□□□□ -0.96
SRRM1-215ENST00000488317 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
SRRM1-215ENST00000488317 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
SRRM1-215ENST00000488317 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-215ENST00000488317 POLR3EQ9NVU0 708 aa9.06□□□□□ -0.96
SRRM1-215ENST00000488317 COL9A1P20849 921 aa9.03□□□□□ -0.96
SRRM1-215ENST00000488317 PTPREP23469 700 aa9.03□□□□□ -0.96
SRRM1-215ENST00000488317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
SRRM1-215ENST00000488317 SNPHO15079 494 aa9.02□□□□□ -0.97
SRRM1-215ENST00000488317 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
SRRM1-215ENST00000488317 BCL2L12Q9HB09 334 aa9.02□□□□□ -0.97
SRRM1-215ENST00000488317 RCCD1A6NED2 376 aa9.01□□□□□ -0.97
SRRM1-215ENST00000488317 FAM198AQ9UFP1 575 aa9.01□□□□□ -0.97
SRRM1-215ENST00000488317 PPP1R3GB7ZBB8 358 aa9□□□□□ -0.97
SRRM1-215ENST00000488317 DIXDC1Q155Q3 683 aa9□□□□□ -0.97
SRRM1-215ENST00000488317 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
SRRM1-215ENST00000488317 NUDT18Q6ZVK8 323 aa9□□□□□ -0.97
SRRM1-215ENST00000488317 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
SRRM1-215ENST00000488317 UBTFP17480 764 aaKnown RBP8.99□□□□□ -0.97
SRRM1-215ENST00000488317 PACS2Q86VP3 889 aa8.99□□□□□ -0.97
SRRM1-215ENST00000488317 EYA1Q99502 592 aa8.99□□□□□ -0.97
SRRM1-215ENST00000488317 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
SRRM1-215ENST00000488317 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
SRRM1-215ENST00000488317 NBPF26B4DH59 902 aa8.98□□□□□ -0.97
SRRM1-215ENST00000488317 ONECUT3O60422 494 aaPredicted RBP8.98□□□□□ -0.97
SRRM1-215ENST00000488317 CLK2P49760 499 aaKnown RBP8.98□□□□□ -0.97
SRRM1-215ENST00000488317 KCNH8Q96L42 1107 aa8.98□□□□□ -0.97
SRRM1-215ENST00000488317 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
SRRM1-215ENST00000488317 SULF1Q8IWU6 871 aa8.97□□□□□ -0.97
SRRM1-215ENST00000488317 TATDN2Q93075 761 aa8.97□□□□□ -0.97
SRRM1-215ENST00000488317 DDX11L8A8MPP1 907 aa8.96□□□□□ -0.98
SRRM1-215ENST00000488317 TRIM6-TRIM34B2RNG4 842 aa8.96□□□□□ -0.98
SRRM1-215ENST00000488317 DNAJB2P25686 324 aa8.96□□□□□ -0.98
SRRM1-215ENST00000488317 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.98
SRRM1-215ENST00000488317 ARID3AQ99856 593 aa8.96□□□□□ -0.98
SRRM1-215ENST00000488317 CLUAP1Q96AJ1 413 aa8.95□□□□□ -0.98
SRRM1-215ENST00000488317 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
SRRM1-215ENST00000488317 ARID3CA6NKF2 412 aa8.94□□□□□ -0.98
SRRM1-215ENST00000488317 APBB1O00213 710 aa8.94□□□□□ -0.98
SRRM1-215ENST00000488317 MCM6Q14566 821 aa8.94□□□□□ -0.98
SRRM1-215ENST00000488317 SPIRE2Q8WWL2 714 aa8.94□□□□□ -0.98
SRRM1-215ENST00000488317 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
SRRM1-215ENST00000488317 SMAPO00193 183 aa8.93□□□□□ -0.98
SRRM1-215ENST00000488317 CD46P15529 392 aa8.93□□□□□ -0.98
SRRM1-215ENST00000488317 RIC3Q7Z5B4 369 aa8.93□□□□□ -0.98
SRRM1-215ENST00000488317 A6NJR5 290 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms