RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
ECHDC1-217ENST00000488087 MAP3K7O43318 606 aa8.7□□□□□ -1.02
ECHDC1-217ENST00000488087 TYW1BQ6NUM6 668 aa8.7□□□□□ -1.02
ECHDC1-217ENST00000488087 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
ECHDC1-217ENST00000488087 FOSBP53539 338 aa8.68□□□□□ -1.02
ECHDC1-217ENST00000488087 EN1Q05925 392 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-217ENST00000488087 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
ECHDC1-217ENST00000488087 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
ECHDC1-217ENST00000488087 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
ECHDC1-217ENST00000488087 PSDA5PKW4 1024 aaPredicted RBP8.66□□□□□ -1.02
ECHDC1-217ENST00000488087 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
ECHDC1-217ENST00000488087 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
ECHDC1-217ENST00000488087 ZMYND10O75800 440 aa8.64□□□□□ -1.03
ECHDC1-217ENST00000488087 FCHSD2O94868 740 aa8.64□□□□□ -1.03
ECHDC1-217ENST00000488087 KRI1Q8N9T8 703 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-217ENST00000488087 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
ECHDC1-217ENST00000488087 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
ECHDC1-217ENST00000488087 GPR37O15354 613 aa8.62□□□□□ -1.03
ECHDC1-217ENST00000488087 ADAM33Q9BZ11 813 aa8.62□□□□□ -1.03
ECHDC1-217ENST00000488087 PTGDRQ13258 359 aa8.61□□□□□ -1.03
ECHDC1-217ENST00000488087 HIC1Q14526 733 aa8.61□□□□□ -1.03
ECHDC1-217ENST00000488087 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
ECHDC1-217ENST00000488087 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
ECHDC1-217ENST00000488087 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
ECHDC1-217ENST00000488087 GNPATO15228 680 aa8.6□□□□□ -1.03
ECHDC1-217ENST00000488087 PLA2G2EQ9NZK7 142 aa8.6□□□□□ -1.03
ECHDC1-217ENST00000488087 PTPREP23469 700 aa8.57□□□□□ -1.04
ECHDC1-217ENST00000488087 LSM11P83369 360 aaKnown RBP eCLIP8.57□□□□□ -1.04
ECHDC1-217ENST00000488087 CERKQ8TCT0 537 aa8.57□□□□□ -1.04
ECHDC1-217ENST00000488087 KCNH8Q96L42 1107 aa8.57□□□□□ -1.04
ECHDC1-217ENST00000488087 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
ECHDC1-217ENST00000488087 NPDC1Q9NQX5 325 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-217ENST00000488087 FECHP22830 423 aa8.55□□□□□ -1.04
ECHDC1-217ENST00000488087 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
ECHDC1-217ENST00000488087 AK7Q96M32 723 aa8.55□□□□□ -1.04
ECHDC1-217ENST00000488087 HCSTQ9UBK5 93 aa8.55□□□□□ -1.04
ECHDC1-217ENST00000488087 KCNK17Q96T54 332 aa8.54□□□□□ -1.04
ECHDC1-217ENST00000488087 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-217ENST00000488087 PPP1R3GB7ZBB8 358 aa8.52□□□□□ -1.05
ECHDC1-217ENST00000488087 IRF6O14896 467 aa8.52□□□□□ -1.05
ECHDC1-217ENST00000488087 COL9A1P20849 921 aa8.52□□□□□ -1.05
ECHDC1-217ENST00000488087 PBX2P40425 430 aa8.52□□□□□ -1.05
ECHDC1-217ENST00000488087 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
ECHDC1-217ENST00000488087 PADI6Q6TGC4 694 aa8.51□□□□□ -1.05
ECHDC1-217ENST00000488087 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
ECHDC1-217ENST00000488087 PRSS12P56730 875 aa8.5□□□□□ -1.05
ECHDC1-217ENST00000488087 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
ECHDC1-217ENST00000488087 PSEN2P49810 448 aa8.49□□□□□ -1.05
ECHDC1-217ENST00000488087 RBM27Q9P2N5 1060 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-217ENST00000488087 AXIN2Q9Y2T1 843 aa8.49□□□□□ -1.05
ECHDC1-217ENST00000488087 NEUROD2Q15784 382 aa8.48□□□□□ -1.05
ECHDC1-217ENST00000488087 TRIM66O15016 1216 aa8.47□□□□□ -1.05
ECHDC1-217ENST00000488087 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
ECHDC1-217ENST00000488087 PROX2Q3B8N5 592 aa8.46□□□□□ -1.06
ECHDC1-217ENST00000488087 PDE4DQ08499 809 aa8.45□□□□□ -1.06
ECHDC1-217ENST00000488087 POTEEQ6S8J3 1075 aa8.45□□□□□ -1.06
ECHDC1-217ENST00000488087 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
ECHDC1-217ENST00000488087 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 OATP04181 439 aa8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 TTC13Q8NBP0 860 aa8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
ECHDC1-217ENST00000488087 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
ECHDC1-217ENST00000488087 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
ECHDC1-217ENST00000488087 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-217ENST00000488087 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
ECHDC1-217ENST00000488087 TTLL12Q14166 644 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-217ENST00000488087 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
ECHDC1-217ENST00000488087 PNMA3Q9UL41 463 aa8.42□□□□□ -1.06
ECHDC1-217ENST00000488087 AMHR2Q16671 573 aa8.41□□□□□ -1.06
ECHDC1-217ENST00000488087 NUDT18Q6ZVK8 323 aa8.41□□□□□ -1.06
ECHDC1-217ENST00000488087 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
ECHDC1-217ENST00000488087 GPBP1L1Q9HC44 474 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-217ENST00000488087 KIAA1468Q9P260 1216 aa8.41□□□□□ -1.06
ECHDC1-217ENST00000488087 ONECUT3O60422 494 aaPredicted RBP8.4□□□□□ -1.06
ECHDC1-217ENST00000488087 TATDN2Q93075 761 aa8.4□□□□□ -1.06
ECHDC1-217ENST00000488087 MDM2Q00987 491 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-217ENST00000488087 ADGRD1Q6QNK2 874 aa8.39□□□□□ -1.07
ECHDC1-217ENST00000488087 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
ECHDC1-217ENST00000488087 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
ECHDC1-217ENST00000488087 SMAPO00193 183 aa8.38□□□□□ -1.07
ECHDC1-217ENST00000488087 PARP9Q8IXQ6 854 aa8.38□□□□□ -1.07
ECHDC1-217ENST00000488087 NLRP7Q8WX94 980 aa8.38□□□□□ -1.07
ECHDC1-217ENST00000488087 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
ECHDC1-217ENST00000488087 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
ECHDC1-217ENST00000488087 C3orf80F5H4A9 247 aa8.37□□□□□ -1.07
ECHDC1-217ENST00000488087 CLCN1P35523 988 aa8.37□□□□□ -1.07
ECHDC1-217ENST00000488087 EYA1Q99502 592 aa8.37□□□□□ -1.07
ECHDC1-217ENST00000488087 KDM4CQ9H3R0 1056 aa8.37□□□□□ -1.07
ECHDC1-217ENST00000488087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
ECHDC1-217ENST00000488087 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
ECHDC1-217ENST00000488087 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
ECHDC1-217ENST00000488087 NBPF3Q9H094 633 aa8.36□□□□□ -1.07
ECHDC1-217ENST00000488087 SEPT9Q9UHD8 586 aaPredicted RBP8.36□□□□□ -1.07
ECHDC1-217ENST00000488087 TK2O00142 265 aa8.35□□□□□ -1.07
ECHDC1-217ENST00000488087 DNAJB2P25686 324 aa8.35□□□□□ -1.07
ECHDC1-217ENST00000488087 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
ECHDC1-217ENST00000488087 RGS20O76081 388 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms