RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 KCNH8Q96L42 1107 aa9.63□□□□□ -0.87
TTC3-220ENST00000487711 KCNK17Q96T54 332 aa9.63□□□□□ -0.87
TTC3-220ENST00000487711 POTEMA6NI47 508 aa9.62□□□□□ -0.87
TTC3-220ENST00000487711 PTPREP23469 700 aa9.62□□□□□ -0.87
TTC3-220ENST00000487711 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
TTC3-220ENST00000487711 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
TTC3-220ENST00000487711 CDHR5Q9HBB8 845 aa9.6□□□□□ -0.87
TTC3-220ENST00000487711 ARHGAP33O14559 1287 aa9.59□□□□□ -0.87
TTC3-220ENST00000487711 PBX2P40425 430 aa9.59□□□□□ -0.87
TTC3-220ENST00000487711 AXIN2Q9Y2T1 843 aa9.59□□□□□ -0.87
TTC3-220ENST00000487711 PSEN2P49810 448 aa9.58□□□□□ -0.88
TTC3-220ENST00000487711 FCHSD2O94868 740 aa9.57□□□□□ -0.88
TTC3-220ENST00000487711 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
TTC3-220ENST00000487711 COL9A1P20849 921 aa9.56□□□□□ -0.88
TTC3-220ENST00000487711 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
TTC3-220ENST00000487711 PTGDRQ13258 359 aa9.55□□□□□ -0.88
TTC3-220ENST00000487711 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
TTC3-220ENST00000487711 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
TTC3-220ENST00000487711 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
TTC3-220ENST00000487711 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
TTC3-220ENST00000487711 GPR37O15354 613 aa9.52□□□□□ -0.89
TTC3-220ENST00000487711 HIC1Q14526 733 aa9.52□□□□□ -0.89
TTC3-220ENST00000487711 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
TTC3-220ENST00000487711 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
TTC3-220ENST00000487711 GNPATO15228 680 aa9.5□□□□□ -0.89
TTC3-220ENST00000487711 PRSS12P56730 875 aa9.5□□□□□ -0.89
TTC3-220ENST00000487711 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
TTC3-220ENST00000487711 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
TTC3-220ENST00000487711 ZBED2Q9BTP6 218 aa9.5□□□□□ -0.89
TTC3-220ENST00000487711 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
TTC3-220ENST00000487711 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
TTC3-220ENST00000487711 PADI6Q6TGC4 694 aa9.48□□□□□ -0.89
TTC3-220ENST00000487711 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
TTC3-220ENST00000487711 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
TTC3-220ENST00000487711 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
TTC3-220ENST00000487711 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
TTC3-220ENST00000487711 ZMYND10O75800 440 aa9.46□□□□□ -0.9
TTC3-220ENST00000487711 FECHP22830 423 aa9.46□□□□□ -0.9
TTC3-220ENST00000487711 KRI1Q8N9T8 703 aaKnown RBP9.46□□□□□ -0.9
TTC3-220ENST00000487711 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
TTC3-220ENST00000487711 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
TTC3-220ENST00000487711 VPS9D1Q9Y2B5 631 aa9.46□□□□□ -0.9
TTC3-220ENST00000487711 TK2O00142 265 aa9.45□□□□□ -0.9
TTC3-220ENST00000487711 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
TTC3-220ENST00000487711 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
TTC3-220ENST00000487711 BARGINQ6ZT62 677 aa9.44□□□□□ -0.9
TTC3-220ENST00000487711 KIAA1468Q9P260 1216 aa9.44□□□□□ -0.9
TTC3-220ENST00000487711 ONECUT3O60422 494 aaPredicted RBP9.43□□□□□ -0.9
TTC3-220ENST00000487711 PCDH10Q9P2E7 1040 aa9.43□□□□□ -0.9
TTC3-220ENST00000487711 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
TTC3-220ENST00000487711 NBPF26B4DH59 902 aa9.42□□□□□ -0.9
TTC3-220ENST00000487711 MAP2K5Q13163 448 aa9.42□□□□□ -0.9
TTC3-220ENST00000487711 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
TTC3-220ENST00000487711 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
TTC3-220ENST00000487711 MINK1Q8N4C8 1332 aaPredicted RBP9.41□□□□□ -0.9
TTC3-220ENST00000487711 PRKCSHP14314 528 aaPredicted RBP9.41□□□□□ -0.9
TTC3-220ENST00000487711 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
TTC3-220ENST00000487711 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
TTC3-220ENST00000487711 TATDN2Q93075 761 aa9.4□□□□□ -0.9
TTC3-220ENST00000487711 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
TTC3-220ENST00000487711 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
TTC3-220ENST00000487711 IRF6O14896 467 aa9.39□□□□□ -0.91
TTC3-220ENST00000487711 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
TTC3-220ENST00000487711 ADGRG1Q9Y653 693 aa9.39□□□□□ -0.91
TTC3-220ENST00000487711 SMAPO00193 183 aa9.38□□□□□ -0.91
TTC3-220ENST00000487711 OATP04181 439 aa9.38□□□□□ -0.91
TTC3-220ENST00000487711 RBM46Q8TBY0 533 aaKnown RBP9.38□□□□□ -0.91
TTC3-220ENST00000487711 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
TTC3-220ENST00000487711 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
TTC3-220ENST00000487711 SEPT9Q9UHD8 586 aaPredicted RBP9.38□□□□□ -0.91
TTC3-220ENST00000487711 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
TTC3-220ENST00000487711 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
TTC3-220ENST00000487711 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
TTC3-220ENST00000487711 HRO43593 1189 aa9.36□□□□□ -0.91
TTC3-220ENST00000487711 AK7Q96M32 723 aa9.35□□□□□ -0.91
TTC3-220ENST00000487711 FAM98CQ17RN3 349 aaKnown RBP9.34□□□□□ -0.91
TTC3-220ENST00000487711 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
TTC3-220ENST00000487711 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
TTC3-220ENST00000487711 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
TTC3-220ENST00000487711 EYA1Q99502 592 aa9.34□□□□□ -0.91
TTC3-220ENST00000487711 GOLGA8CPA6NN73 597 aa9.33□□□□□ -0.92
TTC3-220ENST00000487711 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
TTC3-220ENST00000487711 DNAJB2P25686 324 aa9.3□□□□□ -0.92
TTC3-220ENST00000487711 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
TTC3-220ENST00000487711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
TTC3-220ENST00000487711 TRIM66O15016 1216 aa9.29□□□□□ -0.92
TTC3-220ENST00000487711 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
TTC3-220ENST00000487711 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
TTC3-220ENST00000487711 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
TTC3-220ENST00000487711 SPNS2Q8IVW8 549 aa9.27□□□□□ -0.93
TTC3-220ENST00000487711 WNT2BQ93097 391 aa9.27□□□□□ -0.93
TTC3-220ENST00000487711 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
TTC3-220ENST00000487711 MDM2Q00987 491 aaPredicted RBP9.26□□□□□ -0.93
TTC3-220ENST00000487711 TTLL12Q14166 644 aaPredicted RBP9.26□□□□□ -0.93
TTC3-220ENST00000487711 SAMD7Q7Z3H4 446 aa9.26□□□□□ -0.93
TTC3-220ENST00000487711 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
TTC3-220ENST00000487711 TMEM134Q9H6X4 195 aa9.26□□□□□ -0.93
TTC3-220ENST00000487711 AMHR2Q16671 573 aa9.25□□□□□ -0.93
TTC3-220ENST00000487711 SWT1Q5T5J6 900 aaKnown RBP9.25□□□□□ -0.93
TTC3-220ENST00000487711 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms