RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PLEKHG3A1L390 1219 aa10.6□□□□□ -0.71
SRRM1-213ENST00000485441 MAP3K7O43318 606 aa10.6□□□□□ -0.71
SRRM1-213ENST00000485441 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
SRRM1-213ENST00000485441 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
SRRM1-213ENST00000485441 KHSRPQ92945 711 aaKnown RBP eCLIP10.59□□□□□ -0.71
SRRM1-213ENST00000485441 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
SRRM1-213ENST00000485441 ARSIQ5FYB1 569 aa10.58□□□□□ -0.72
SRRM1-213ENST00000485441 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
SRRM1-213ENST00000485441 DOK7Q18PE1 504 aa10.57□□□□□ -0.72
SRRM1-213ENST00000485441 ZSWIM6Q9HCJ5 1215 aa10.57□□□□□ -0.72
SRRM1-213ENST00000485441 C6orf132Q5T0Z8 1188 aa10.56□□□□□ -0.72
SRRM1-213ENST00000485441 PHOX2BQ99453 314 aa10.56□□□□□ -0.72
SRRM1-213ENST00000485441 NUDT7P0C024 238 aa10.55□□□□□ -0.72
SRRM1-213ENST00000485441 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
SRRM1-213ENST00000485441 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
SRRM1-213ENST00000485441 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
SRRM1-213ENST00000485441 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
SRRM1-213ENST00000485441 C14orf37Q86TY3 774 aa10.52□□□□□ -0.73
SRRM1-213ENST00000485441 ZNF454Q8N9F8 522 aa10.52□□□□□ -0.73
SRRM1-213ENST00000485441 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
SRRM1-213ENST00000485441 MS4A1P11836 297 aa10.51□□□□□ -0.73
SRRM1-213ENST00000485441 GIGYF2Q6Y7W6 1299 aaKnown RBP10.51□□□□□ -0.73
SRRM1-213ENST00000485441 MAMSTRQ6ZN01 415 aa10.5□□□□□ -0.73
SRRM1-213ENST00000485441 SCUBE2Q9NQ36 999 aa10.5□□□□□ -0.73
SRRM1-213ENST00000485441 TTLL12Q14166 644 aaPredicted RBP10.49□□□□□ -0.73
SRRM1-213ENST00000485441 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
SRRM1-213ENST00000485441 FAM161AQ3B820 660 aa10.48□□□□□ -0.73
SRRM1-213ENST00000485441 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
SRRM1-213ENST00000485441 GOPCQ9HD26 462 aa10.48□□□□□ -0.73
SRRM1-213ENST00000485441 RBM27Q9P2N5 1060 aaKnown RBP10.48□□□□□ -0.73
SRRM1-213ENST00000485441 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
SRRM1-213ENST00000485441 METTL3Q86U44 580 aaKnown RBP10.47□□□□□ -0.73
SRRM1-213ENST00000485441 LHX6Q9UPM6 363 aa10.47□□□□□ -0.73
SRRM1-213ENST00000485441 OATP04181 439 aa10.46□□□□□ -0.73
SRRM1-213ENST00000485441 CLCN1P35523 988 aa10.46□□□□□ -0.73
SRRM1-213ENST00000485441 PXYLP1Q8TE99 480 aa10.46□□□□□ -0.73
SRRM1-213ENST00000485441 GPCPD1Q9NPB8 672 aa10.46□□□□□ -0.73
SRRM1-213ENST00000485441 PRSS12P56730 875 aa10.45□□□□□ -0.74
SRRM1-213ENST00000485441 MDM2Q00987 491 aaPredicted RBP10.45□□□□□ -0.74
SRRM1-213ENST00000485441 FAM198AQ9UFP1 575 aa10.44□□□□□ -0.74
SRRM1-213ENST00000485441 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
SRRM1-213ENST00000485441 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
SRRM1-213ENST00000485441 BCL2L12Q9HB09 334 aa10.43□□□□□ -0.74
SRRM1-213ENST00000485441 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
SRRM1-213ENST00000485441 COL9A1P20849 921 aa10.42□□□□□ -0.74
SRRM1-213ENST00000485441 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
SRRM1-213ENST00000485441 FAM217BQ9NTX9 383 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-213ENST00000485441 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
SRRM1-213ENST00000485441 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
SRRM1-213ENST00000485441 PPP4R3BQ5MIZ7 849 aa10.39□□□□□ -0.75
SRRM1-213ENST00000485441 SNPHO15079 494 aa10.38□□□□□ -0.75
SRRM1-213ENST00000485441 EYA1Q99502 592 aa10.38□□□□□ -0.75
SRRM1-213ENST00000485441 C3orf80F5H4A9 247 aa10.37□□□□□ -0.75
SRRM1-213ENST00000485441 SH3D19Q5HYK7 790 aa10.37□□□□□ -0.75
SRRM1-213ENST00000485441 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
SRRM1-213ENST00000485441 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
SRRM1-213ENST00000485441 PPP1R3GB7ZBB8 358 aa10.35□□□□□ -0.75
SRRM1-213ENST00000485441 RBM46Q8TBY0 533 aaKnown RBP10.35□□□□□ -0.75
SRRM1-213ENST00000485441 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
SRRM1-213ENST00000485441 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-213ENST00000485441 PTPREP23469 700 aa10.33□□□□□ -0.76
SRRM1-213ENST00000485441 SKIV2LQ15477 1246 aaKnown RBP10.33□□□□□ -0.76
SRRM1-213ENST00000485441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
SRRM1-213ENST00000485441 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
SRRM1-213ENST00000485441 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
SRRM1-213ENST00000485441 PCMTD1Q96MG8 357 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-213ENST00000485441 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
SRRM1-213ENST00000485441 TRIM6-TRIM34B2RNG4 842 aa10.3□□□□□ -0.76
SRRM1-213ENST00000485441 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
SRRM1-213ENST00000485441 TATDN2Q93075 761 aa10.29□□□□□ -0.76
SRRM1-213ENST00000485441 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
SRRM1-213ENST00000485441 NUDT18Q6ZVK8 323 aa10.28□□□□□ -0.76
SRRM1-213ENST00000485441 SUPT5HO00267 1087 aaKnown RBP10.27□□□□□ -0.77
SRRM1-213ENST00000485441 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.27□□□□□ -0.77
SRRM1-213ENST00000485441 CD46P15529 392 aa10.26□□□□□ -0.77
SRRM1-213ENST00000485441 PROX2Q3B8N5 592 aa10.26□□□□□ -0.77
SRRM1-213ENST00000485441 POTEEQ6S8J3 1075 aa10.26□□□□□ -0.77
SRRM1-213ENST00000485441 FLIIQ13045 1269 aa10.25□□□□□ -0.77
SRRM1-213ENST00000485441 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
SRRM1-213ENST00000485441 ZBED2Q9BTP6 218 aa10.25□□□□□ -0.77
SRRM1-213ENST00000485441 TBC1D2Q9BYX2 928 aa10.25□□□□□ -0.77
SRRM1-213ENST00000485441 PNMA3Q9UL41 463 aa10.25□□□□□ -0.77
SRRM1-213ENST00000485441 DNAJB2P25686 324 aa10.24□□□□□ -0.77
SRRM1-213ENST00000485441 LHX8Q68G74 356 aa10.24□□□□□ -0.77
SRRM1-213ENST00000485441 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
SRRM1-213ENST00000485441 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
SRRM1-213ENST00000485441 NBPF26B4DH59 902 aa10.23□□□□□ -0.77
SRRM1-213ENST00000485441 KCNK17Q96T54 332 aa10.23□□□□□ -0.77
SRRM1-213ENST00000485441 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
SRRM1-213ENST00000485441 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
SRRM1-213ENST00000485441 SMAPO00193 183 aa10.21□□□□□ -0.77
SRRM1-213ENST00000485441 PSEN2P49810 448 aa10.21□□□□□ -0.77
SRRM1-213ENST00000485441 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.77
SRRM1-213ENST00000485441 ARXQ96QS3 562 aa10.2□□□□□ -0.78
SRRM1-213ENST00000485441 SLC4A5Q9BY07 1137 aa10.2□□□□□ -0.78
SRRM1-213ENST00000485441 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
SRRM1-213ENST00000485441 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
SRRM1-213ENST00000485441 TUSC1Q2TAM9 212 aa10.19□□□□□ -0.78
SRRM1-213ENST00000485441 LIMD1Q9UGP4 676 aa10.19□□□□□ -0.78
SRRM1-213ENST00000485441 ARHGAP33O14559 1287 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms