RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 FCHSD2O94868 740 aa11.33□□□□□ -0.6
RBM39-233ENST00000482563 FBXO31Q5XUX0 539 aaPredicted RBP11.33□□□□□ -0.6
RBM39-233ENST00000482563 FAM177A1Q8N128 213 aaPredicted RBP11.33□□□□□ -0.6
RBM39-233ENST00000482563 POM121CA8CG34 1229 aa11.32□□□□□ -0.6
RBM39-233ENST00000482563 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
RBM39-233ENST00000482563 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
RBM39-233ENST00000482563 DSG2Q14126 1118 aa11.3□□□□□ -0.6
RBM39-233ENST00000482563 GLMNQ92990 594 aa11.3□□□□□ -0.6
RBM39-233ENST00000482563 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
RBM39-233ENST00000482563 SND1Q7KZF4 910 aaKnown RBP eCLIP11.29□□□□□ -0.6
RBM39-233ENST00000482563 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
RBM39-233ENST00000482563 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
RBM39-233ENST00000482563 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
RBM39-233ENST00000482563 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
RBM39-233ENST00000482563 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
RBM39-233ENST00000482563 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
RBM39-233ENST00000482563 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
RBM39-233ENST00000482563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
RBM39-233ENST00000482563 RFC5P40937 340 aa11.26□□□□□ -0.61
RBM39-233ENST00000482563 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
RBM39-233ENST00000482563 TBC1D12O60347 775 aa11.25□□□□□ -0.61
RBM39-233ENST00000482563 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
RBM39-233ENST00000482563 PTGDRQ13258 359 aa11.24□□□□□ -0.61
RBM39-233ENST00000482563 PHOX2BQ99453 314 aa11.24□□□□□ -0.61
RBM39-233ENST00000482563 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
RBM39-233ENST00000482563 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
RBM39-233ENST00000482563 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
RBM39-233ENST00000482563 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
RBM39-233ENST00000482563 ATP1B4Q9UN42 357 aaPredicted RBP11.23□□□□□ -0.61
RBM39-233ENST00000482563 MAP3K13O43283 966 aa11.22□□□□□ -0.61
RBM39-233ENST00000482563 CLCN1P35523 988 aa11.22□□□□□ -0.61
RBM39-233ENST00000482563 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
RBM39-233ENST00000482563 CFAP70Q5T0N1 1121 aa11.21□□□□□ -0.62
RBM39-233ENST00000482563 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.62
RBM39-233ENST00000482563 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
RBM39-233ENST00000482563 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
RBM39-233ENST00000482563 RFX1P22670 979 aa11.19□□□□□ -0.62
RBM39-233ENST00000482563 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
RBM39-233ENST00000482563 ADAMTS19Q8TE59 1207 aa11.19□□□□□ -0.62
RBM39-233ENST00000482563 KIAA1522Q9P206 1035 aaPredicted RBP11.19□□□□□ -0.62
RBM39-233ENST00000482563 ABL2P42684 1182 aa11.17□□□□□ -0.62
RBM39-233ENST00000482563 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
RBM39-233ENST00000482563 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
RBM39-233ENST00000482563 CCDC125Q86Z20 511 aa11.16□□□□□ -0.62
RBM39-233ENST00000482563 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
RBM39-233ENST00000482563 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
RBM39-233ENST00000482563 TBC1D2BQ9UPU7 963 aa11.15□□□□□ -0.62
RBM39-233ENST00000482563 FOXK1P85037 733 aa11.15□□□□□ -0.63
RBM39-233ENST00000482563 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.63
RBM39-233ENST00000482563 DDX12PQ92771 950 aa11.14□□□□□ -0.63
RBM39-233ENST00000482563 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
RBM39-233ENST00000482563 TMEM259Q4ZIN3 620 aa11.13□□□□□ -0.63
RBM39-233ENST00000482563 TXNDC2Q86VQ3 553 aa11.13□□□□□ -0.63
RBM39-233ENST00000482563 PTGER2P43116 358 aa11.12□□□□□ -0.63
RBM39-233ENST00000482563 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
RBM39-233ENST00000482563 VRTNQ9H8Y1 702 aa11.12□□□□□ -0.63
RBM39-233ENST00000482563 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
RBM39-233ENST00000482563 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
RBM39-233ENST00000482563 HDGFL1Q5TGJ6 251 aa11.11□□□□□ -0.63
RBM39-233ENST00000482563 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
RBM39-233ENST00000482563 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
RBM39-233ENST00000482563 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
RBM39-233ENST00000482563 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
RBM39-233ENST00000482563 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
RBM39-233ENST00000482563 PLPP6Q8IY26 295 aa11.08□□□□□ -0.64
RBM39-233ENST00000482563 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
RBM39-233ENST00000482563 MRRFQ96E11 262 aaKnown RBP11.08□□□□□ -0.64
RBM39-233ENST00000482563 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
RBM39-233ENST00000482563 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
RBM39-233ENST00000482563 PPP1R12CQ9BZL4 782 aa11.06□□□□□ -0.64
RBM39-233ENST00000482563 SOCS7O14512 581 aa11.06□□□□□ -0.64
RBM39-233ENST00000482563 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
RBM39-233ENST00000482563 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
RBM39-233ENST00000482563 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
RBM39-233ENST00000482563 DNAJC14Q6Y2X3 702 aaPredicted RBP11.04□□□□□ -0.64
RBM39-233ENST00000482563 PPM1GO15355 546 aaPredicted RBP11.01□□□□□ -0.65
RBM39-233ENST00000482563 TMC2Q8TDI7 906 aa11.01□□□□□ -0.65
RBM39-233ENST00000482563 PALM3A6NDB9 673 aaPredicted RBP11.01□□□□□ -0.65
RBM39-233ENST00000482563 GOLGA2Q08379 1002 aa11□□□□□ -0.65
RBM39-233ENST00000482563 FAM161AQ3B820 660 aa11□□□□□ -0.65
RBM39-233ENST00000482563 UPF1Q92900 1129 aaKnown RBP eCLIP11□□□□□ -0.65
RBM39-233ENST00000482563 GPR37L1O60883 481 aa10.99□□□□□ -0.65
RBM39-233ENST00000482563 ATG7O95352 703 aa10.98□□□□□ -0.65
RBM39-233ENST00000482563 ZNF16P17020 682 aaPredicted RBP10.98□□□□□ -0.65
RBM39-233ENST00000482563 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
RBM39-233ENST00000482563 LMOD1P29536 600 aaPredicted RBP10.98□□□□□ -0.65
RBM39-233ENST00000482563 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
RBM39-233ENST00000482563 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
RBM39-233ENST00000482563 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
RBM39-233ENST00000482563 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
RBM39-233ENST00000482563 UCN2Q96RP3 112 aa10.97□□□□□ -0.65
RBM39-233ENST00000482563 KIF3CO14782 793 aa10.96□□□□□ -0.65
RBM39-233ENST00000482563 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.65
RBM39-233ENST00000482563 C2orf72A6NCS6 295 aa10.95□□□□□ -0.66
RBM39-233ENST00000482563 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
RBM39-233ENST00000482563 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
RBM39-233ENST00000482563 DHX37Q8IY37 1157 aaKnown RBP10.95□□□□□ -0.66
RBM39-233ENST00000482563 PRM3Q9NNZ6 103 aa10.95□□□□□ -0.66
RBM39-233ENST00000482563 TCF3P15923 654 aa10.95□□□□□ -0.66
RBM39-233ENST00000482563 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms