RNA–Protein interactions for RNA: ENST00000481935.5

ABCD4-211, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-211ENST00000481935 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
ABCD4-211ENST00000481935 KIF3BO15066 747 aa18.31■□□□□ 0.52
ABCD4-211ENST00000481935 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
ABCD4-211ENST00000481935 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
ABCD4-211ENST00000481935 MADDQ8WXG6 1647 aa18.29■□□□□ 0.52
ABCD4-211ENST00000481935 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
ABCD4-211ENST00000481935 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
ABCD4-211ENST00000481935 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
ABCD4-211ENST00000481935 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
ABCD4-211ENST00000481935 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
ABCD4-211ENST00000481935 REREQ9P2R6 1566 aa18.25■□□□□ 0.51
ABCD4-211ENST00000481935 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
ABCD4-211ENST00000481935 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
ABCD4-211ENST00000481935 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
ABCD4-211ENST00000481935 CEBPAP49715 358 aaPredicted RBP18.24■□□□□ 0.51
ABCD4-211ENST00000481935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.512e-10■■□□□ 11.8
ABCD4-211ENST00000481935 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
ABCD4-211ENST00000481935 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
ABCD4-211ENST00000481935 AGLP35573 1532 aa18.22■□□□□ 0.51
ABCD4-211ENST00000481935 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
ABCD4-211ENST00000481935 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
ABCD4-211ENST00000481935 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
ABCD4-211ENST00000481935 ROCK1Q13464 1354 aa18.19■□□□□ 0.5
ABCD4-211ENST00000481935 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
ABCD4-211ENST00000481935 PTPRMP28827 1452 aa18.17■□□□□ 0.5
ABCD4-211ENST00000481935 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
ABCD4-211ENST00000481935 CFAP65Q6ZU64 1925 aaKnown RBP18.15■□□□□ 0.5
ABCD4-211ENST00000481935 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
ABCD4-211ENST00000481935 ERBINQ96RT1 1412 aa18.14■□□□□ 0.49
ABCD4-211ENST00000481935 MROH1Q8NDA8 1641 aa18.14■□□□□ 0.49
ABCD4-211ENST00000481935 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
ABCD4-211ENST00000481935 CEP152O94986 1710 aa18.12■□□□□ 0.49
ABCD4-211ENST00000481935 EIF2AK4Q9P2K8 1649 aaKnown RBP18.11■□□□□ 0.49
ABCD4-211ENST00000481935 C3P01024 1663 aa18.1■□□□□ 0.49
ABCD4-211ENST00000481935 RNF17Q9BXT8 1623 aaKnown RBP18.1■□□□□ 0.49
ABCD4-211ENST00000481935 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
ABCD4-211ENST00000481935 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
ABCD4-211ENST00000481935 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
ABCD4-211ENST00000481935 KDM5DQ9BY66 1539 aa18.07■□□□□ 0.48
ABCD4-211ENST00000481935 DEPDC5O75140 1603 aa18.06■□□□□ 0.48
ABCD4-211ENST00000481935 ABCC3O15438 1527 aa18.06■□□□□ 0.48
ABCD4-211ENST00000481935 PRDM15P57071 1507 aaPredicted RBP18.06■□□□□ 0.48
ABCD4-211ENST00000481935 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
ABCD4-211ENST00000481935 NUP155O75694 1391 aa18.04■□□□□ 0.48
ABCD4-211ENST00000481935 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
ABCD4-211ENST00000481935 KANK1Q14678 1352 aa18.02■□□□□ 0.48
ABCD4-211ENST00000481935 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.48
ABCD4-211ENST00000481935 FOXD1Q16676 465 aa18.01■□□□□ 0.47
ABCD4-211ENST00000481935 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
ABCD4-211ENST00000481935 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
ABCD4-211ENST00000481935 HSPA2P54652 639 aa18■□□□□ 0.47
ABCD4-211ENST00000481935 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
ABCD4-211ENST00000481935 UNC13BO14795 1591 aa18■□□□□ 0.47
ABCD4-211ENST00000481935 PZPP20742 1482 aa17.98■□□□□ 0.47
ABCD4-211ENST00000481935 VWDEQ8N2E2 1590 aa17.98■□□□□ 0.47
ABCD4-211ENST00000481935 NPATQ14207 1427 aa17.98■□□□□ 0.47
ABCD4-211ENST00000481935 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
ABCD4-211ENST00000481935 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
ABCD4-211ENST00000481935 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
ABCD4-211ENST00000481935 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
ABCD4-211ENST00000481935 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
ABCD4-211ENST00000481935 IQGAP3Q86VI3 1631 aa17.93■□□□□ 0.46
ABCD4-211ENST00000481935 EFCAB6Q5THR3 1501 aa17.93■□□□□ 0.46
ABCD4-211ENST00000481935 LMTK3Q96Q04 1460 aa17.93■□□□□ 0.46
ABCD4-211ENST00000481935 E9PCH4 1651 aa17.92■□□□□ 0.46
ABCD4-211ENST00000481935 PREX1Q8TCU6 1659 aa17.92■□□□□ 0.46
ABCD4-211ENST00000481935 TET3O43151 1660 aa17.91■□□□□ 0.46
ABCD4-211ENST00000481935 TNRQ92752 1358 aa17.91■□□□□ 0.46
ABCD4-211ENST00000481935 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
ABCD4-211ENST00000481935 LMTK2Q8IWU2 1503 aa17.9■□□□□ 0.46
ABCD4-211ENST00000481935 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.46
ABCD4-211ENST00000481935 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.46
ABCD4-211ENST00000481935 PKD2Q13563 968 aa17.89■□□□□ 0.46
ABCD4-211ENST00000481935 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
ABCD4-211ENST00000481935 UGGT1Q9NYU2 1555 aa17.89■□□□□ 0.45
ABCD4-211ENST00000481935 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
ABCD4-211ENST00000481935 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
ABCD4-211ENST00000481935 ARHGAP31Q2M1Z3 1444 aa17.87■□□□□ 0.45
ABCD4-211ENST00000481935 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
ABCD4-211ENST00000481935 SYNMO15061 1565 aa17.86■□□□□ 0.45
ABCD4-211ENST00000481935 PPP1R15AO75807 674 aaPredicted RBP17.86■□□□□ 0.45
ABCD4-211ENST00000481935 IDI1Q13907 227 aa17.85■□□□□ 0.45
ABCD4-211ENST00000481935 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
ABCD4-211ENST00000481935 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
ABCD4-211ENST00000481935 NOS1P29475 1434 aa17.82■□□□□ 0.44
ABCD4-211ENST00000481935 RPRD2Q5VT52 1461 aaKnown RBP17.81■□□□□ 0.44
ABCD4-211ENST00000481935 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
ABCD4-211ENST00000481935 STAG3Q9UJ98 1225 aa17.8■□□□□ 0.44
ABCD4-211ENST00000481935 SPHKAPQ2M3C7 1700 aa17.79■□□□□ 0.44
ABCD4-211ENST00000481935 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
ABCD4-211ENST00000481935 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
ABCD4-211ENST00000481935 ZNF142P52746 1687 aaPredicted RBP17.78■□□□□ 0.44
ABCD4-211ENST00000481935 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
ABCD4-211ENST00000481935 PLA2R1Q13018 1463 aa17.78■□□□□ 0.44
ABCD4-211ENST00000481935 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
ABCD4-211ENST00000481935 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.43
ABCD4-211ENST00000481935 NLRP1Q9C000 1473 aa17.77■□□□□ 0.43
ABCD4-211ENST00000481935 UBR1Q8IWV7 1749 aa17.76■□□□□ 0.43
ABCD4-211ENST00000481935 STRCQ7RTU9 1775 aa17.75■□□□□ 0.43
ABCD4-211ENST00000481935 CLTCL1P53675 1640 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms