RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 SPATA31E1Q6ZUB1 1445 aa27.84■■■□□ 2.05
CHKB-209ENST00000481673 MYT1LQ9UL68 1186 aa27.82■■■□□ 2.04
CHKB-209ENST00000481673 PLA2R1Q13018 1463 aa27.81■■■□□ 2.04
CHKB-209ENST00000481673 EIF2AK4Q9P2K8 1649 aaKnown RBP27.81■■■□□ 2.04
CHKB-209ENST00000481673 ANP32CO43423 234 aa27.81■■■□□ 2.04
CHKB-209ENST00000481673 DEPDC5O75140 1603 aa27.8■■■□□ 2.04
CHKB-209ENST00000481673 POGZQ7Z3K3 1410 aa27.79■■■□□ 2.04
CHKB-209ENST00000481673 RALGAPBQ86X10 1494 aa27.78■■■□□ 2.04
CHKB-209ENST00000481673 MLH3Q9UHC1 1453 aa27.78■■■□□ 2.04
CHKB-209ENST00000481673 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
CHKB-209ENST00000481673 YTHDC1Q96MU7 727 aaKnown RBP27.77■■■□□ 2.04
CHKB-209ENST00000481673 WASHC2AQ641Q2 1341 aa27.77■■■□□ 2.04
CHKB-209ENST00000481673 DCAF11Q8TEB1 546 aa27.76■■■□□ 2.04
CHKB-209ENST00000481673 CCER2I3L3R5 266 aa27.76■■■□□ 2.03
CHKB-209ENST00000481673 KDM5CP41229 1560 aa27.76■■■□□ 2.03
CHKB-209ENST00000481673 KIF3BO15066 747 aa27.74■■■□□ 2.03
CHKB-209ENST00000481673 STAC3Q96MF2 364 aa27.73■■■□□ 2.03
CHKB-209ENST00000481673 VWDEQ8N2E2 1590 aa27.73■■■□□ 2.03
CHKB-209ENST00000481673 ARID4BQ4LE39 1312 aaPredicted RBP27.72■■■□□ 2.03
CHKB-209ENST00000481673 GLI2P10070 1586 aa27.72■■■□□ 2.03
CHKB-209ENST00000481673 ZNF326Q5BKZ1 582 aaKnown RBP27.72■■■□□ 2.03
CHKB-209ENST00000481673 RIMBP3CA6NJZ7 1639 aa27.71■■■□□ 2.03
CHKB-209ENST00000481673 RIMBP3BA6NNM3 1639 aa27.71■■■□□ 2.03
CHKB-209ENST00000481673 RIMBP3Q9UFD9 1639 aa27.71■■■□□ 2.03
CHKB-209ENST00000481673 KIDINS220Q9ULH0 1771 aa27.71■■■□□ 2.03
CHKB-209ENST00000481673 CCDC7Q96M83 1385 aa27.71■■■□□ 2.03
CHKB-209ENST00000481673 PTPRTO14522 1441 aa27.7■■■□□ 2.03
CHKB-209ENST00000481673 USP47Q96K76 1375 aa27.7■■■□□ 2.02
CHKB-209ENST00000481673 PRDM15P57071 1507 aaPredicted RBP27.7■■■□□ 2.02
CHKB-209ENST00000481673 A2MP01023 1474 aa27.69■■■□□ 2.02
CHKB-209ENST00000481673 TET3O43151 1660 aa27.68■■■□□ 2.02
CHKB-209ENST00000481673 KDM2AQ9Y2K7 1162 aa27.68■■■□□ 2.02
CHKB-209ENST00000481673 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
CHKB-209ENST00000481673 PRAG1Q86YV5 1406 aa27.65■■■□□ 2.02
CHKB-209ENST00000481673 TRPM2O94759 1503 aa27.65■■■□□ 2.02
CHKB-209ENST00000481673 HECW2Q9P2P5 1572 aa27.64■■■□□ 2.02
CHKB-209ENST00000481673 MAP3K4Q9Y6R4 1608 aa27.63■■■□□ 2.01
CHKB-209ENST00000481673 E9PCH4 1651 aa27.62■■■□□ 2.01
CHKB-209ENST00000481673 CNTLNQ9NXG0 1405 aa27.62■■■□□ 2.01
CHKB-209ENST00000481673 LMTK2Q8IWU2 1503 aa27.62■■■□□ 2.01
CHKB-209ENST00000481673 RGL3Q3MIN7 710 aa27.61■■■□□ 2.01
CHKB-209ENST00000481673 ROCK2O75116 1388 aaKnown RBP27.6■■■□□ 2.01
CHKB-209ENST00000481673 C11orf95C9JLR9 678 aaPredicted RBP27.59■■■□□ 2.01
CHKB-209ENST00000481673 KIF7Q2M1P5 1343 aa27.59■■■□□ 2.01
CHKB-209ENST00000481673 MROH1Q8NDA8 1641 aa27.58■■■□□ 2.01
CHKB-209ENST00000481673 GPRASP1Q5JY77 1395 aa27.58■■■□□ 2.01
CHKB-209ENST00000481673 RNF17Q9BXT8 1623 aaKnown RBP27.58■■■□□ 2.01
CHKB-209ENST00000481673 POLR1AO95602 1720 aaPredicted RBP27.58■■■□□ 2.01
CHKB-209ENST00000481673 NEURL4Q96JN8 1562 aa27.57■■■□□ 2
CHKB-209ENST00000481673 BCORL1Q5H9F3 1711 aa27.55■■■□□ 2
CHKB-209ENST00000481673 SPHKAPQ2M3C7 1700 aa27.54■■■□□ 2
CHKB-209ENST00000481673 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
CHKB-209ENST00000481673 EFCAB6Q5THR3 1501 aa27.52■■■□□ 2
CHKB-209ENST00000481673 FAM69CQ0P6D2 419 aa27.52■■■□□ 2
CHKB-209ENST00000481673 TRPM1Q7Z4N2 1603 aa27.51■■■□□ 2
CHKB-209ENST00000481673 RAPGEF3O95398 923 aa27.51■■□□□ 1.99
CHKB-209ENST00000481673 LAMC1P11047 1609 aa27.51■■□□□ 1.99
CHKB-209ENST00000481673 FRMPD1Q5SYB0 1578 aa27.5■■□□□ 1.99
CHKB-209ENST00000481673 DIP2BQ9P265 1576 aa27.47■■□□□ 1.99
CHKB-209ENST00000481673 CEP152O94986 1710 aa27.47■■□□□ 1.99
CHKB-209ENST00000481673 ABCA6Q8N139 1617 aa27.47■■□□□ 1.99
CHKB-209ENST00000481673 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
CHKB-209ENST00000481673 RICTORQ6R327 1708 aa27.45■■□□□ 1.99
CHKB-209ENST00000481673 CLTCL1P53675 1640 aa27.45■■□□□ 1.98
CHKB-209ENST00000481673 GGT6Q6P531 493 aa27.42■■□□□ 1.98
CHKB-209ENST00000481673 DIP2CQ9Y2E4 1556 aa27.42■■□□□ 1.98
CHKB-209ENST00000481673 WASHC2CQ9Y4E1 1318 aa27.42■■□□□ 1.98
CHKB-209ENST00000481673 NBPF1Q3BBV0 1214 aa27.4■■□□□ 1.98
CHKB-209ENST00000481673 GTF3C3Q9Y5Q9 886 aa27.4■■□□□ 1.98
CHKB-209ENST00000481673 PPRC1Q5VV67 1664 aaKnown RBP27.4■■□□□ 1.98
CHKB-209ENST00000481673 ZMYM4Q5VZL5 1548 aa27.4■■□□□ 1.98
CHKB-209ENST00000481673 PRKRIP1Q9H875 184 aaPredicted RBP27.4■■□□□ 1.98
CHKB-209ENST00000481673 ABCC3O15438 1527 aa27.36■■□□□ 1.97
CHKB-209ENST00000481673 NPATQ14207 1427 aa27.35■■□□□ 1.97
CHKB-209ENST00000481673 ARHGAP31Q2M1Z3 1444 aa27.34■■□□□ 1.97
CHKB-209ENST00000481673 MADDQ8WXG6 1647 aa27.33■■□□□ 1.97
CHKB-209ENST00000481673 MYOM2P54296 1465 aa27.33■■□□□ 1.97
CHKB-209ENST00000481673 YEATS2Q9ULM3 1422 aa27.31■■□□□ 1.96
CHKB-209ENST00000481673 SLC24A1O60721 1099 aa27.3■■□□□ 1.96
CHKB-209ENST00000481673 PPP6R1Q9UPN7 881 aa27.3■■□□□ 1.96
CHKB-209ENST00000481673 RPGRIP1LQ68CZ1 1315 aa27.29■■□□□ 1.96
CHKB-209ENST00000481673 ZC3H13Q5T200 1668 aaKnown RBP27.29■■□□□ 1.96
CHKB-209ENST00000481673 KIF1BO60333 1816 aa27.29■■□□□ 1.96
CHKB-209ENST00000481673 POLR3GLQ9BT43 218 aa27.28■■□□□ 1.96
CHKB-209ENST00000481673 KTN1Q86UP2 1357 aaKnown RBP27.27■■□□□ 1.96
CHKB-209ENST00000481673 NOS1P29475 1434 aa27.27■■□□□ 1.96
CHKB-209ENST00000481673 TMF1P82094 1093 aa27.27■■□□□ 1.96
CHKB-209ENST00000481673 TESK2Q96S53 571 aa27.27■■□□□ 1.96
CHKB-209ENST00000481673 KIAA1210Q9ULL0 1709 aa27.27■■□□□ 1.96
CHKB-209ENST00000481673 REREQ9P2R6 1566 aa27.25■■□□□ 1.95
CHKB-209ENST00000481673 SCAF11Q99590 1463 aaKnown RBP27.25■■□□□ 1.95
CHKB-209ENST00000481673 ADGRB3O60242 1522 aa27.24■■□□□ 1.95
CHKB-209ENST00000481673 CAMSAP1Q5T5Y3 1602 aa27.24■■□□□ 1.95
CHKB-209ENST00000481673 EIF3AQ14152 1382 aaKnown RBP27.23■■□□□ 1.95
CHKB-209ENST00000481673 COL17A1Q9UMD9 1497 aaPredicted RBP27.23■■□□□ 1.95
CHKB-209ENST00000481673 UGGT1Q9NYU2 1555 aa27.23■■□□□ 1.95
CHKB-209ENST00000481673 NRXN1Q9ULB1 1477 aa27.22■■□□□ 1.95
CHKB-209ENST00000481673 CDCA8Q53HL2 280 aa27.21■■□□□ 1.95
CHKB-209ENST00000481673 AGLP35573 1532 aa27.21■■□□□ 1.95
CHKB-209ENST00000481673 SLC52A1Q9NWF4 448 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms