RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ANKRD30AQ9BXX3 1397 aa20.56■□□□□ 0.88
CLSTN1-205ENST00000477264 KIAA1107Q9UPP5 1409 aa20.56■□□□□ 0.88
CLSTN1-205ENST00000477264 ADGRL2O95490 1459 aa20.55■□□□□ 0.88
CLSTN1-205ENST00000477264 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
CLSTN1-205ENST00000477264 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
CLSTN1-205ENST00000477264 DENND4BO75064 1496 aaPredicted RBP20.54■□□□□ 0.88
CLSTN1-205ENST00000477264 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
CLSTN1-205ENST00000477264 FANCAO15360 1455 aa20.51■□□□□ 0.87
CLSTN1-205ENST00000477264 ABCC1P33527 1531 aa20.5■□□□□ 0.87
CLSTN1-205ENST00000477264 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
CLSTN1-205ENST00000477264 KDM6BO15054 1643 aa20.49■□□□□ 0.87
CLSTN1-205ENST00000477264 CD109Q6YHK3 1445 aa20.47■□□□□ 0.87
CLSTN1-205ENST00000477264 SPATA31E1Q6ZUB1 1445 aa20.47■□□□□ 0.87
CLSTN1-205ENST00000477264 RPRD2Q5VT52 1461 aaKnown RBP20.47■□□□□ 0.87
CLSTN1-205ENST00000477264 TEX14Q8IWB6 1497 aa20.47■□□□□ 0.87
CLSTN1-205ENST00000477264 ARHGEF12Q9NZN5 1544 aa20.46■□□□□ 0.87
CLSTN1-205ENST00000477264 C11orf95C9JLR9 678 aaPredicted RBP20.46■□□□□ 0.87
CLSTN1-205ENST00000477264 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
CLSTN1-205ENST00000477264 CFAP74Q9C0B2 1584 aa20.44■□□□□ 0.86
CLSTN1-205ENST00000477264 KIF15Q9NS87 1388 aa20.43■□□□□ 0.86
CLSTN1-205ENST00000477264 ANKRD50Q9ULJ7 1429 aa20.43■□□□□ 0.86
CLSTN1-205ENST00000477264 ADGRL1O94910 1474 aa20.43■□□□□ 0.86
CLSTN1-205ENST00000477264 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
CLSTN1-205ENST00000477264 PPM1GO15355 546 aaPredicted RBP20.41■□□□□ 0.86
CLSTN1-205ENST00000477264 SALL2Q9Y467 1007 aaPredicted RBP20.41■□□□□ 0.86
CLSTN1-205ENST00000477264 WASHC2CQ9Y4E1 1318 aa20.41■□□□□ 0.86
CLSTN1-205ENST00000477264 TRAPPC8Q9Y2L5 1435 aa20.41■□□□□ 0.86
CLSTN1-205ENST00000477264 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
CLSTN1-205ENST00000477264 SCAPERQ9BY12 1400 aa20.39■□□□□ 0.85
CLSTN1-205ENST00000477264 PLXNC1O60486 1568 aa20.39■□□□□ 0.85
CLSTN1-205ENST00000477264 GLI2P10070 1586 aa20.38■□□□□ 0.85
CLSTN1-205ENST00000477264 DHX29Q7Z478 1369 aaKnown RBP20.38■□□□□ 0.85
CLSTN1-205ENST00000477264 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
CLSTN1-205ENST00000477264 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
CLSTN1-205ENST00000477264 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
CLSTN1-205ENST00000477264 MAP3K4Q9Y6R4 1608 aa20.37■□□□□ 0.85
CLSTN1-205ENST00000477264 MS4A1P11836 297 aa20.36■□□□□ 0.85
CLSTN1-205ENST00000477264 AFAP1Q8N556 730 aa20.36■□□□□ 0.85
CLSTN1-205ENST00000477264 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
CLSTN1-205ENST00000477264 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
CLSTN1-205ENST00000477264 DIP2BQ9P265 1576 aa20.34■□□□□ 0.85
CLSTN1-205ENST00000477264 FAM69CQ0P6D2 419 aa20.34■□□□□ 0.85
CLSTN1-205ENST00000477264 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
CLSTN1-205ENST00000477264 RTEL1-TNFRSF6BF6WH68 1400 aa20.34■□□□□ 0.85
CLSTN1-205ENST00000477264 NEO1Q92859 1461 aa20.33■□□□□ 0.85
CLSTN1-205ENST00000477264 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
CLSTN1-205ENST00000477264 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
CLSTN1-205ENST00000477264 NEFMP07197 916 aa20.32■□□□□ 0.84
CLSTN1-205ENST00000477264 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
CLSTN1-205ENST00000477264 ZNF518AQ6AHZ1 1483 aa20.31■□□□□ 0.84
CLSTN1-205ENST00000477264 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
CLSTN1-205ENST00000477264 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
CLSTN1-205ENST00000477264 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
CLSTN1-205ENST00000477264 ATP7AQ04656 1500 aa20.3■□□□□ 0.84
CLSTN1-205ENST00000477264 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
CLSTN1-205ENST00000477264 KDM5CP41229 1560 aa20.29■□□□□ 0.84
CLSTN1-205ENST00000477264 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
CLSTN1-205ENST00000477264 NUP155O75694 1391 aa20.28■□□□□ 0.84
CLSTN1-205ENST00000477264 ERBINQ96RT1 1412 aa20.27■□□□□ 0.84
CLSTN1-205ENST00000477264 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.84
CLSTN1-205ENST00000477264 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.83
CLSTN1-205ENST00000477264 PZPP20742 1482 aa20.26■□□□□ 0.83
CLSTN1-205ENST00000477264 POGZQ7Z3K3 1410 aa20.26■□□□□ 0.83
CLSTN1-205ENST00000477264 BACH2Q9BYV9 841 aa20.25■□□□□ 0.83
CLSTN1-205ENST00000477264 PDE4AP27815 886 aa20.25■□□□□ 0.83
CLSTN1-205ENST00000477264 RRP1P56182 461 aaKnown RBP20.25■□□□□ 0.83
CLSTN1-205ENST00000477264 UBE2Q2Q8WVN8 375 aa20.25■□□□□ 0.83
CLSTN1-205ENST00000477264 TSPOAP1O95153 1857 aa20.25■□□□□ 0.83
CLSTN1-205ENST00000477264 KDM5DQ9BY66 1539 aa20.24■□□□□ 0.83
CLSTN1-205ENST00000477264 E9PCH4 1651 aa20.24■□□□□ 0.83
CLSTN1-205ENST00000477264 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
CLSTN1-205ENST00000477264 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
CLSTN1-205ENST00000477264 FOXD1Q16676 465 aa20.22■□□□□ 0.83
CLSTN1-205ENST00000477264 UNC13BO14795 1591 aa20.22■□□□□ 0.83
CLSTN1-205ENST00000477264 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
CLSTN1-205ENST00000477264 KIF13AQ9H1H9 1805 aa20.21■□□□□ 0.83
CLSTN1-205ENST00000477264 HECW2Q9P2P5 1572 aa20.2■□□□□ 0.82
CLSTN1-205ENST00000477264 PKD2Q13563 968 aa20.19■□□□□ 0.82
CLSTN1-205ENST00000477264 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
CLSTN1-205ENST00000477264 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
CLSTN1-205ENST00000477264 USP47Q96K76 1375 aa20.19■□□□□ 0.82
CLSTN1-205ENST00000477264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.822e-13■□□□□ 9.3
CLSTN1-205ENST00000477264 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
CLSTN1-205ENST00000477264 ZMYM4Q5VZL5 1548 aa20.18■□□□□ 0.82
CLSTN1-205ENST00000477264 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
CLSTN1-205ENST00000477264 PDE3BQ13370 1112 aa20.18■□□□□ 0.82
CLSTN1-205ENST00000477264 RTN4Q9NQC3 1192 aaKnown RBP20.18■□□□□ 0.82
CLSTN1-205ENST00000477264 RAPGEF3O95398 923 aa20.17■□□□□ 0.82
CLSTN1-205ENST00000477264 PPRC1Q5VV67 1664 aaKnown RBP20.17■□□□□ 0.82
CLSTN1-205ENST00000477264 GSE1Q14687 1217 aa20.17■□□□□ 0.82
CLSTN1-205ENST00000477264 RICTORQ6R327 1708 aa20.17■□□□□ 0.82
CLSTN1-205ENST00000477264 TMC1Q8TDI8 760 aa20.16■□□□□ 0.82
CLSTN1-205ENST00000477264 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
CLSTN1-205ENST00000477264 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
CLSTN1-205ENST00000477264 EIF2AK4Q9P2K8 1649 aaKnown RBP20.14■□□□□ 0.81
CLSTN1-205ENST00000477264 INSRP06213 1382 aa20.14■□□□□ 0.81
CLSTN1-205ENST00000477264 MAGI2Q86UL8 1455 aa20.14■□□□□ 0.81
CLSTN1-205ENST00000477264 RCAN3Q9UKA8 241 aa20.14■□□□□ 0.81
CLSTN1-205ENST00000477264 MYBBP1AQ9BQG0 1328 aaKnown RBP20.13■□□□□ 0.81
CLSTN1-205ENST00000477264 EXOC6Q8TAG9 804 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms