RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ANKRD30AQ9BXX3 1397 aa13.69□□□□□ -0.22
VAPB-204ENST00000475243 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
VAPB-204ENST00000475243 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
VAPB-204ENST00000475243 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
VAPB-204ENST00000475243 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
VAPB-204ENST00000475243 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
VAPB-204ENST00000475243 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
VAPB-204ENST00000475243 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
VAPB-204ENST00000475243 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
VAPB-204ENST00000475243 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
VAPB-204ENST00000475243 HMMRO75330 724 aa13.68□□□□□ -0.22
VAPB-204ENST00000475243 SYAP1Q96A49 352 aaPredicted RBP13.68□□□□□ -0.22
VAPB-204ENST00000475243 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
VAPB-204ENST00000475243 TPM4P67936 248 aa13.67□□□□□ -0.22
VAPB-204ENST00000475243 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
VAPB-204ENST00000475243 RILPL2Q969X0 211 aa13.67□□□□□ -0.22
VAPB-204ENST00000475243 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
VAPB-204ENST00000475243 PTMSP20962 102 aa13.65□□□□□ -0.22
VAPB-204ENST00000475243 PLIN1O60240 522 aa13.64□□□□□ -0.23
VAPB-204ENST00000475243 MARCH6O60337 910 aa13.63□□□□□ -0.23
VAPB-204ENST00000475243 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
VAPB-204ENST00000475243 EVA1CP58658 441 aa13.63□□□□□ -0.23
VAPB-204ENST00000475243 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
VAPB-204ENST00000475243 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
VAPB-204ENST00000475243 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
VAPB-204ENST00000475243 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
VAPB-204ENST00000475243 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
VAPB-204ENST00000475243 CHMP4AQ9BY43 222 aa13.62□□□□□ -0.23
VAPB-204ENST00000475243 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
VAPB-204ENST00000475243 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
VAPB-204ENST00000475243 PANK3Q9H999 370 aa13.62□□□□□ -0.23
VAPB-204ENST00000475243 MSH5O43196 834 aa13.61□□□□□ -0.23
VAPB-204ENST00000475243 CCDC34Q96HJ3 373 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 NLRP13Q86W25 1043 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 WWC1Q8IX03 1113 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 WIZO95785 1651 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 ST18O60284 1047 aa13.6□□□□□ -0.23
VAPB-204ENST00000475243 H3BQV1 296 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 FHOD3Q2V2M9 1422 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 CSPP1Q1MSJ5 1256 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
VAPB-204ENST00000475243 RAD21O60216 631 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
VAPB-204ENST00000475243 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
VAPB-204ENST00000475243 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
VAPB-204ENST00000475243 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
VAPB-204ENST00000475243 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
VAPB-204ENST00000475243 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
VAPB-204ENST00000475243 FAM184AQ8NB25 1140 aa13.56□□□□□ -0.24
VAPB-204ENST00000475243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
VAPB-204ENST00000475243 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
VAPB-204ENST00000475243 COG3Q96JB2 828 aa13.55□□□□□ -0.24
VAPB-204ENST00000475243 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
VAPB-204ENST00000475243 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
VAPB-204ENST00000475243 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
VAPB-204ENST00000475243 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
VAPB-204ENST00000475243 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
VAPB-204ENST00000475243 TEFQ10587 303 aa13.54□□□□□ -0.24
VAPB-204ENST00000475243 PHF14O94880 888 aa13.53□□□□□ -0.24
VAPB-204ENST00000475243 JPH4Q96JJ6 628 aa13.53□□□□□ -0.24
VAPB-204ENST00000475243 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
VAPB-204ENST00000475243 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
VAPB-204ENST00000475243 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
VAPB-204ENST00000475243 CRBNQ96SW2 442 aa13.52□□□□□ -0.24
VAPB-204ENST00000475243 COG6Q9Y2V7 657 aa13.52□□□□□ -0.24
VAPB-204ENST00000475243 TPM3P06753 285 aa13.52□□□□□ -0.25
VAPB-204ENST00000475243 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
VAPB-204ENST00000475243 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
VAPB-204ENST00000475243 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
VAPB-204ENST00000475243 APPP05067 770 aa13.51□□□□□ -0.25
VAPB-204ENST00000475243 PRDM2Q13029 1718 aa13.51□□□□□ -0.25
VAPB-204ENST00000475243 KIF3AQ9Y496 699 aa13.51□□□□□ -0.25
VAPB-204ENST00000475243 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
VAPB-204ENST00000475243 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
VAPB-204ENST00000475243 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
VAPB-204ENST00000475243 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
VAPB-204ENST00000475243 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
VAPB-204ENST00000475243 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
VAPB-204ENST00000475243 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
VAPB-204ENST00000475243 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
VAPB-204ENST00000475243 GOLGA6L19H0YKK7 550 aa13.49□□□□□ -0.25
VAPB-204ENST00000475243 DDX49Q9Y6V7 483 aaKnown RBP13.49□□□□□ -0.25
VAPB-204ENST00000475243 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
VAPB-204ENST00000475243 PSME1Q06323 249 aa13.49□□□□□ -0.25
VAPB-204ENST00000475243 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
VAPB-204ENST00000475243 APAF1O14727 1248 aa13.49□□□□□ -0.25
VAPB-204ENST00000475243 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
VAPB-204ENST00000475243 ZKSCAN2Q63HK3 967 aa13.48□□□□□ -0.25
VAPB-204ENST00000475243 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
VAPB-204ENST00000475243 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
VAPB-204ENST00000475243 CENPQQ7L2Z9 268 aaPredicted RBP13.48□□□□□ -0.25
VAPB-204ENST00000475243 TRIM34Q9BYJ4 488 aa13.48□□□□□ -0.25
VAPB-204ENST00000475243 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
VAPB-204ENST00000475243 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
VAPB-204ENST00000475243 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms